RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 LDHBP07195 334 aaKnown RBP17.18■□□□□ 0.34
PCDHGC3-208ENST00000622836 GRM1Q13255 1194 aa17.18■□□□□ 0.34
PCDHGC3-208ENST00000622836 CCDC158Q5M9N0 1113 aa17.18■□□□□ 0.34
PCDHGC3-208ENST00000622836 ZGPATQ8N5A5 531 aaKnown RBP17.18■□□□□ 0.34
PCDHGC3-208ENST00000622836 C2orf69Q8N8R5 385 aa17.18■□□□□ 0.34
PCDHGC3-208ENST00000622836 PRMT6Q96LA8 375 aaPredicted RBP17.18■□□□□ 0.34
PCDHGC3-208ENST00000622836 BCL11AQ9H165 835 aa17.18■□□□□ 0.34
PCDHGC3-208ENST00000622836 TLL2Q9Y6L7 1015 aa17.18■□□□□ 0.34
PCDHGC3-208ENST00000622836 NF2P35240 595 aa17.17■□□□□ 0.34
PCDHGC3-208ENST00000622836 TTC39AQ5SRH9 613 aa17.17■□□□□ 0.34
PCDHGC3-208ENST00000622836 PRAMEF18Q5VWM3 479 aa17.17■□□□□ 0.34
PCDHGC3-208ENST00000622836 DBNDD2Q9BQY9 259 aa17.17■□□□□ 0.34
PCDHGC3-208ENST00000622836 GBA2Q9HCG7 927 aaPredicted RBP17.17■□□□□ 0.34
PCDHGC3-208ENST00000622836 ABCF2Q9UG63 623 aa17.17■□□□□ 0.34
PCDHGC3-208ENST00000622836 RASSF10A6NK89 507 aa17.16■□□□□ 0.34
PCDHGC3-208ENST00000622836 UQCRFS1P1P0C7P4 283 aa17.16■□□□□ 0.34
PCDHGC3-208ENST00000622836 PRDX5P30044 214 aa17.16■□□□□ 0.34
PCDHGC3-208ENST00000622836 HDLBPQ00341 1268 aaKnown RBP17.16■□□□□ 0.34
PCDHGC3-208ENST00000622836 SAPCD2Q86UD0 394 aa17.16■□□□□ 0.34
PCDHGC3-208ENST00000622836 SIRT2Q8IXJ6 389 aa17.16■□□□□ 0.34
PCDHGC3-208ENST00000622836 TDRD3Q9H7E2 651 aaKnown RBP17.16■□□□□ 0.34
PCDHGC3-208ENST00000622836 SALL1Q9NSC2 1324 aa17.16■□□□□ 0.34
PCDHGC3-208ENST00000622836 HUNKP57058 714 aa17.15■□□□□ 0.34
PCDHGC3-208ENST00000622836 TTLL12Q14166 644 aaPredicted RBP17.15■□□□□ 0.34
PCDHGC3-208ENST00000622836 SPTY2D1Q68D10 685 aaPredicted RBP17.15■□□□□ 0.34
PCDHGC3-208ENST00000622836 AACSQ86V21 672 aa17.15■□□□□ 0.34
PCDHGC3-208ENST00000622836 DZIP1Q86YF9 867 aaKnown RBP17.15■□□□□ 0.34
PCDHGC3-208ENST00000622836 SPATA5Q8NB90 893 aa17.15■□□□□ 0.34
PCDHGC3-208ENST00000622836 CCDC8Q9H0W5 538 aaPredicted RBP17.15■□□□□ 0.34
PCDHGC3-208ENST00000622836 DEFB129Q9H1M3 183 aa17.15■□□□□ 0.34
PCDHGC3-208ENST00000622836 IL1RAPL2Q9NP60 686 aa17.15■□□□□ 0.34
PCDHGC3-208ENST00000622836 ZNF70Q9UC06 446 aaPredicted RBP17.15■□□□□ 0.34
PCDHGC3-208ENST00000622836 PDS5AQ29RF7 1337 aaKnown RBP17.15■□□□□ 0.34
PCDHGC3-208ENST00000622836 ARID4AP29374 1257 aaPredicted RBP17.14■□□□□ 0.33
PCDHGC3-208ENST00000622836 ECE1P42892 770 aa17.14■□□□□ 0.33
PCDHGC3-208ENST00000622836 VEGFBP49765 207 aa17.14■□□□□ 0.33
PCDHGC3-208ENST00000622836 TNFAIP1Q13829 316 aa17.14■□□□□ 0.33
PCDHGC3-208ENST00000622836 RHPN1Q8TCX5 695 aa17.14■□□□□ 0.33
PCDHGC3-208ENST00000622836 KIF1BPQ96EK5 621 aa17.14■□□□□ 0.33
PCDHGC3-208ENST00000622836 TMOD2Q9NZR1 351 aa17.14■□□□□ 0.33
PCDHGC3-208ENST00000622836 HMG20BQ9P0W2 317 aa17.14■□□□□ 0.33
PCDHGC3-208ENST00000622836 AOX1Q06278 1338 aa17.14■□□□□ 0.33
PCDHGC3-208ENST00000622836 ECM29Q5VYK3 1845 aa17.13■□□□□ 0.33
PCDHGC3-208ENST00000622836 ZBTB22O15209 634 aa17.13■□□□□ 0.33
PCDHGC3-208ENST00000622836 RAB11FIP3O75154 756 aa17.13■□□□□ 0.33
PCDHGC3-208ENST00000622836 DIXDC1Q155Q3 683 aa17.13■□□□□ 0.33
PCDHGC3-208ENST00000622836 SPDYE2Q495Y8 402 aa17.13■□□□□ 0.33
PCDHGC3-208ENST00000622836 CYP4F22Q6NT55 531 aa17.13■□□□□ 0.33
PCDHGC3-208ENST00000622836 HHIPL2Q6UWX4 724 aa17.13■□□□□ 0.33
PCDHGC3-208ENST00000622836 PI16Q6UXB8 463 aa17.13■□□□□ 0.33
PCDHGC3-208ENST00000622836 ERICH6Q7L0X2 663 aa17.13■□□□□ 0.33
PCDHGC3-208ENST00000622836 CLASRPQ8N2M8 674 aaKnown RBP17.13■□□□□ 0.33
PCDHGC3-208ENST00000622836 EAF2Q96CJ1 260 aaPredicted RBP17.13■□□□□ 0.33
PCDHGC3-208ENST00000622836 CAPNS2Q96L46 248 aa17.13■□□□□ 0.33
PCDHGC3-208ENST00000622836 ZDHHC15Q96MV8 337 aa17.13■□□□□ 0.33
PCDHGC3-208ENST00000622836 CRBNQ96SW2 442 aa17.13■□□□□ 0.33
PCDHGC3-208ENST00000622836 MRIQ9BWK5 157 aa17.13■□□□□ 0.33
PCDHGC3-208ENST00000622836 TLR7Q9NYK1 1049 aaKnown RBP17.13■□□□□ 0.33
PCDHGC3-208ENST00000622836 DBNLQ9UJU6 430 aaKnown RBP17.13■□□□□ 0.33
PCDHGC3-208ENST00000622836 PPP2R3BQ9Y5P8 575 aa17.13■□□□□ 0.33
PCDHGC3-208ENST00000622836 TCP10L2B9ZVM9 353 aa17.12■□□□□ 0.33
PCDHGC3-208ENST00000622836 MCAMP43121 646 aa17.12■□□□□ 0.33
PCDHGC3-208ENST00000622836 TNNI2P48788 182 aa17.12■□□□□ 0.33
PCDHGC3-208ENST00000622836 SLF2Q8IX21 1173 aa17.12■□□□□ 0.33
PCDHGC3-208ENST00000622836 JMYQ8N9B5 988 aa17.12■□□□□ 0.33
PCDHGC3-208ENST00000622836 SNRKQ9NRH2 765 aa17.12■□□□□ 0.33
PCDHGC3-208ENST00000622836 WDR33Q9C0J8 1336 aaKnown RBP17.12■□□□□ 0.33
PCDHGC3-208ENST00000622836 CACNB3P54284 484 aa17.11■□□□□ 0.33
PCDHGC3-208ENST00000622836 FKBP1BP68106 108 aa17.11■□□□□ 0.33
PCDHGC3-208ENST00000622836 PRKG1Q13976 671 aa17.11■□□□□ 0.33
PCDHGC3-208ENST00000622836 RASA3Q14644 834 aa17.11■□□□□ 0.33
PCDHGC3-208ENST00000622836 HHIPL1Q96JK4 782 aa17.11■□□□□ 0.33
PCDHGC3-208ENST00000622836 RAI14Q9P0K7 980 aa17.11■□□□□ 0.33
PCDHGC3-208ENST00000622836 LRP2BPQ9P2M1 347 aa17.11■□□□□ 0.33
PCDHGC3-208ENST00000622836 IFIT2P09913 472 aaKnown RBP17.1■□□□□ 0.33
PCDHGC3-208ENST00000622836 SUPT20HL1Q3ZLR7 823 aa17.1■□□□□ 0.33
PCDHGC3-208ENST00000622836 APOBEC3HQ6NTF7 200 aaKnown RBP17.1■□□□□ 0.33
PCDHGC3-208ENST00000622836 TBC1D9Q6ZT07 1266 aa17.1■□□□□ 0.33
PCDHGC3-208ENST00000622836 DAGLAQ9Y4D2 1042 aa17.1■□□□□ 0.33
PCDHGC3-208ENST00000622836 ZNF157P51786 506 aaPredicted RBP17.09■□□□□ 0.33
PCDHGC3-208ENST00000622836 RGMBQ6NW40 437 aa17.09■□□□□ 0.33
PCDHGC3-208ENST00000622836 ARMC9Q7Z3E5 817 aa17.09■□□□□ 0.33
PCDHGC3-208ENST00000622836 PAPPA2Q9BXP8 1791 aa17.08■□□□□ 0.33
PCDHGC3-208ENST00000622836 PPP1R12BO60237 982 aaPredicted RBP17.08■□□□□ 0.32
PCDHGC3-208ENST00000622836 GSTO1P78417 241 aa17.08■□□□□ 0.32
PCDHGC3-208ENST00000622836 MECOMQ03112 1051 aa17.08■□□□□ 0.32
PCDHGC3-208ENST00000622836 MOB2Q70IA6 237 aa17.08■□□□□ 0.32
PCDHGC3-208ENST00000622836 ZNF512BQ96KM6 892 aaPredicted RBP17.08■□□□□ 0.32
PCDHGC3-208ENST00000622836 LRRCC1Q9C099 1032 aa17.08■□□□□ 0.32
PCDHGC3-208ENST00000622836 USP40Q9NVE5 1235 aa17.08■□□□□ 0.32
PCDHGC3-208ENST00000622836 ANGEL1Q9UNK9 670 aaKnown RBP17.08■□□□□ 0.32
PCDHGC3-208ENST00000622836 SUPT16HQ9Y5B9 1047 aaKnown RBP17.08■□□□□ 0.32
PCDHGC3-208ENST00000622836 UBE2Q2LH0YL09 131 aa17.07■□□□□ 0.32
PCDHGC3-208ENST00000622836 LDHCP07864 332 aa17.07■□□□□ 0.32
PCDHGC3-208ENST00000622836 ZAP70P43403 619 aa17.07■□□□□ 0.32
PCDHGC3-208ENST00000622836 NBPF12Q5TAG4 269 aaPredicted RBP17.07■□□□□ 0.32
PCDHGC3-208ENST00000622836 CDC42EP5Q6NZY7 148 aa17.07■□□□□ 0.32
PCDHGC3-208ENST00000622836 CCDC102AQ96A19 550 aa17.07■□□□□ 0.32
PCDHGC3-208ENST00000622836 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.07■□□□□ 0.32
PCDHGC3-208ENST00000622836 PCDHB15Q9Y5E8 787 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms