RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 GUCA1BQ9UMX6 200 aa18.37■□□□□ 0.53
GABRB3-215ENST00000622697 PLEKHG3A1L390 1219 aa18.37■□□□□ 0.53
GABRB3-215ENST00000622697 CCT6AP40227 531 aaKnown RBP18.37■□□□□ 0.53
GABRB3-215ENST00000622697 MYL5Q02045 173 aa18.37■□□□□ 0.53
GABRB3-215ENST00000622697 UBXN1Q04323 297 aa18.37■□□□□ 0.53
GABRB3-215ENST00000622697 ZNF75DP51815 510 aa18.37■□□□□ 0.53
GABRB3-215ENST00000622697 GNAT2P19087 354 aa18.37■□□□□ 0.53
GABRB3-215ENST00000622697 TPCN1Q9ULQ1 816 aa18.37■□□□□ 0.53
GABRB3-215ENST00000622697 ELP1O95163 1332 aa18.36■□□□□ 0.53
GABRB3-215ENST00000622697 ZAP70P43403 619 aa18.36■□□□□ 0.53
GABRB3-215ENST00000622697 ZNF569Q5MCW4 686 aa18.36■□□□□ 0.53
GABRB3-215ENST00000622697 NEURL1BA8MQ27 555 aa18.36■□□□□ 0.53
GABRB3-215ENST00000622697 CTDSPL2Q05D32 466 aa18.36■□□□□ 0.53
GABRB3-215ENST00000622697 UBE2Q2Q8WVN8 375 aa18.36■□□□□ 0.53
GABRB3-215ENST00000622697 CCDC94Q9BW85 323 aaPredicted RBP18.36■□□□□ 0.53
GABRB3-215ENST00000622697 KIF24Q5T7B8 1368 aa18.36■□□□□ 0.53
GABRB3-215ENST00000622697 ZNF622Q969S3 477 aaKnown RBP eCLIP18.36■□□□□ 0.53
GABRB3-215ENST00000622697 FAM107BQ9H098 131 aa18.36■□□□□ 0.53
GABRB3-215ENST00000622697 RNF187Q5TA31 235 aaPredicted RBP18.36■□□□□ 0.53
GABRB3-215ENST00000622697 MAATS1Q7Z4T9 603 aa18.36■□□□□ 0.53
GABRB3-215ENST00000622697 SIRT2Q8IXJ6 389 aa18.36■□□□□ 0.53
GABRB3-215ENST00000622697 MAPK8IP1Q9UQF2 711 aa18.36■□□□□ 0.53
GABRB3-215ENST00000622697 GIGYF1O75420 1035 aaPredicted RBP18.36■□□□□ 0.53
GABRB3-215ENST00000622697 SYNMO15061 1565 aa18.35■□□□□ 0.53
GABRB3-215ENST00000622697 GSTO1P78417 241 aa18.35■□□□□ 0.53
GABRB3-215ENST00000622697 APPBP2Q92624 585 aa18.35■□□□□ 0.53
GABRB3-215ENST00000622697 RHOXF2BP0C7M4 288 aa18.35■□□□□ 0.53
GABRB3-215ENST00000622697 CYLC1P35663 651 aaPredicted RBP18.35■□□□□ 0.53
GABRB3-215ENST00000622697 RHOXF2Q9BQY4 288 aa18.35■□□□□ 0.53
GABRB3-215ENST00000622697 SAMM50Q9Y512 469 aa18.35■□□□□ 0.53
GABRB3-215ENST00000622697 CTAGE9A4FU28 777 aa18.35■□□□□ 0.53
GABRB3-215ENST00000622697 HLA-DOAP06340 250 aa18.35■□□□□ 0.53
GABRB3-215ENST00000622697 SPAG1Q07617 926 aa18.35■□□□□ 0.53
GABRB3-215ENST00000622697 ANGEL1Q9UNK9 670 aaKnown RBP18.35■□□□□ 0.53
GABRB3-215ENST00000622697 BEND3Q5T5X7 828 aa18.35■□□□□ 0.53
GABRB3-215ENST00000622697 RTL9Q8NET4 1388 aa18.35■□□□□ 0.53
GABRB3-215ENST00000622697 SF3B2Q13435 895 aaKnown RBP18.34■□□□□ 0.53
GABRB3-215ENST00000622697 RASEFQ8IZ41 740 aa18.34■□□□□ 0.53
GABRB3-215ENST00000622697 SYCP3Q8IZU3 236 aa18.34■□□□□ 0.53
GABRB3-215ENST00000622697 KCNH3Q9ULD8 1083 aa18.34■□□□□ 0.53
GABRB3-215ENST00000622697 IBTKQ9P2D0 1353 aaPredicted RBP18.34■□□□□ 0.53
GABRB3-215ENST00000622697 hCG_1642624A0A1W2PR95 340 aa18.34■□□□□ 0.53
GABRB3-215ENST00000622697 E7EWF7 191 aa18.34■□□□□ 0.53
GABRB3-215ENST00000622697 LLPHQ9BRT6 129 aaKnown RBP18.34■□□□□ 0.53
GABRB3-215ENST00000622697 BTG4Q9NY30 223 aa18.34■□□□□ 0.53
GABRB3-215ENST00000622697 CHMP4BP1P59074 171 aa18.34■□□□□ 0.53
GABRB3-215ENST00000622697 POLR2DO15514 142 aaKnown RBP18.34■□□□□ 0.53
GABRB3-215ENST00000622697 NSFL1CQ9UNZ2 370 aaKnown RBP18.34■□□□□ 0.53
GABRB3-215ENST00000622697 ZNF202O95125 648 aa18.34■□□□□ 0.53
GABRB3-215ENST00000622697 ADCK5Q3MIX3 580 aa18.34■□□□□ 0.53
GABRB3-215ENST00000622697 BAG1Q99933 345 aaPredicted RBP18.34■□□□□ 0.53
GABRB3-215ENST00000622697 PHACTR2O75167 634 aa18.33■□□□□ 0.53
GABRB3-215ENST00000622697 PROSER3Q2NL68 480 aa18.33■□□□□ 0.53
GABRB3-215ENST00000622697 SPAG5Q96R06 1193 aa18.33■□□□□ 0.53
GABRB3-215ENST00000622697 GSTTP1A0A1W2PQM5 241 aa18.33■□□□□ 0.53
GABRB3-215ENST00000622697 U2AF2P26368 475 aaKnown RBP eCLIP18.33■□□□□ 0.53
GABRB3-215ENST00000622697 YEATS2Q9ULM3 1422 aa18.33■□□□□ 0.52
GABRB3-215ENST00000622697 PLA2R1Q13018 1463 aa18.33■□□□□ 0.52
GABRB3-215ENST00000622697 ATL3Q6DD88 541 aa18.33■□□□□ 0.52
GABRB3-215ENST00000622697 GTF3C6Q969F1 213 aa18.33■□□□□ 0.52
GABRB3-215ENST00000622697 NAA15Q9BXJ9 866 aaKnown RBP18.33■□□□□ 0.52
GABRB3-215ENST00000622697 ANTXR1Q9H6X2 564 aa18.33■□□□□ 0.52
GABRB3-215ENST00000622697 NR1I2O75469 434 aa18.33■□□□□ 0.52
GABRB3-215ENST00000622697 FEZ1Q99689 392 aa18.33■□□□□ 0.52
GABRB3-215ENST00000622697 V9GY48 417 aaPredicted RBP18.33■□□□□ 0.52
GABRB3-215ENST00000622697 METP08581 1390 aa18.33■□□□□ 0.52
GABRB3-215ENST00000622697 GOLGA6L7A0A1B0GV03 622 aa18.33■□□□□ 0.52
GABRB3-215ENST00000622697 TNNI2P48788 182 aa18.33■□□□□ 0.52
GABRB3-215ENST00000622697 GNAQP50148 359 aa18.32■□□□□ 0.52
GABRB3-215ENST00000622697 DIS3L2Q8IYB7 885 aaKnown RBP18.32■□□□□ 0.52
GABRB3-215ENST00000622697 GOLGA1Q92805 767 aa18.32■□□□□ 0.52
GABRB3-215ENST00000622697 KCNJ14Q9UNX9 436 aa18.32■□□□□ 0.52
GABRB3-215ENST00000622697 MTMR6Q9Y217 621 aa18.32■□□□□ 0.52
GABRB3-215ENST00000622697 CALM1P0DP23 149 aa18.32■□□□□ 0.52
GABRB3-215ENST00000622697 CALM2P0DP24 149 aa18.32■□□□□ 0.52
GABRB3-215ENST00000622697 CALM3P0DP25 149 aa18.32■□□□□ 0.52
GABRB3-215ENST00000622697 FANCCQ00597 558 aa18.32■□□□□ 0.52
GABRB3-215ENST00000622697 EHBP1Q8NDI1 1231 aa18.32■□□□□ 0.52
GABRB3-215ENST00000622697 SAP30BPQ9UHR5 308 aaKnown RBP18.32■□□□□ 0.52
GABRB3-215ENST00000622697 CTNND2Q9UQB3 1225 aa18.32■□□□□ 0.52
GABRB3-215ENST00000622697 DNAJC10Q8IXB1 793 aa18.32■□□□□ 0.52
GABRB3-215ENST00000622697 VPS16Q9H269 839 aa18.32■□□□□ 0.52
GABRB3-215ENST00000622697 ATP5JP18859 108 aa18.31■□□□□ 0.52
GABRB3-215ENST00000622697 TBCAO75347 108 aaKnown RBP18.31■□□□□ 0.52
GABRB3-215ENST00000622697 DTHD1Q6ZMT9 781 aa18.31■□□□□ 0.52
GABRB3-215ENST00000622697 CCDC24Q8N4L8 307 aa18.31■□□□□ 0.52
GABRB3-215ENST00000622697 IQUBQ8NA54 791 aa18.31■□□□□ 0.52
GABRB3-215ENST00000622697 TLR7Q9NYK1 1049 aaKnown RBP18.31■□□□□ 0.52
GABRB3-215ENST00000622697 MYO5CQ9NQX4 1742 aa18.31■□□□□ 0.52
GABRB3-215ENST00000622697 PUM3Q15397 648 aaKnown RBP18.31■□□□□ 0.52
GABRB3-215ENST00000622697 PIK3AP1Q6ZUJ8 805 aa18.31■□□□□ 0.52
GABRB3-215ENST00000622697 POTEJP0CG39 1038 aa18.31■□□□□ 0.52
GABRB3-215ENST00000622697 CALML3P27482 149 aa18.31■□□□□ 0.52
GABRB3-215ENST00000622697 TM6SF1Q9BZW5 370 aa18.31■□□□□ 0.52
GABRB3-215ENST00000622697 C6orf50Q9HD87 102 aa18.31■□□□□ 0.52
GABRB3-215ENST00000622697 ST5P78524 1137 aa18.3■□□□□ 0.52
GABRB3-215ENST00000622697 PRAMEF22A3QJZ6 481 aa18.3■□□□□ 0.52
GABRB3-215ENST00000622697 MAP2K1Q02750 393 aaPredicted RBP18.3■□□□□ 0.52
GABRB3-215ENST00000622697 KRT40Q6A162 431 aa18.3■□□□□ 0.52
GABRB3-215ENST00000622697 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms