RNA–Protein interactions for RNA: ENST00000622565.4

LTBP4-239, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 4

Gene LTBP4, Length 756 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-239ENST00000622565 CDAN1Q8IWY9 1227 aa24.06■■□□□ 1.44
LTBP4-239ENST00000622565 CEP126Q9P2H0 1117 aa24.06■■□□□ 1.44
LTBP4-239ENST00000622565 ANGEL1Q9UNK9 670 aaKnown RBP24.06■■□□□ 1.44
LTBP4-239ENST00000622565 HDAC5Q9UQL6 1122 aa24.06■■□□□ 1.44
LTBP4-239ENST00000622565 PPP2R3BQ9Y5P8 575 aa24.06■■□□□ 1.44
LTBP4-239ENST00000622565 IL15P40933 162 aaPredicted RBP24.05■■□□□ 1.44
LTBP4-239ENST00000622565 MTX1Q13505 466 aa24.05■■□□□ 1.44
LTBP4-239ENST00000622565 TMEM57Q8N5G2 664 aa24.05■■□□□ 1.44
LTBP4-239ENST00000622565 TBC1D22AQ8WUA7 517 aa24.05■■□□□ 1.44
LTBP4-239ENST00000622565 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.05■■□□□ 1.44
LTBP4-239ENST00000622565 SRGAP3O43295 1099 aa24.04■■□□□ 1.44
LTBP4-239ENST00000622565 TRPA1O75762 1119 aa24.04■■□□□ 1.44
LTBP4-239ENST00000622565 MKRN3Q13064 507 aaKnown RBP24.04■■□□□ 1.44
LTBP4-239ENST00000622565 ARMC9Q7Z3E5 817 aa24.04■■□□□ 1.44
LTBP4-239ENST00000622565 ADORA1P30542 326 aa24.03■■□□□ 1.44
LTBP4-239ENST00000622565 MAP3K11Q16584 847 aa24.03■■□□□ 1.44
LTBP4-239ENST00000622565 ZKSCAN2Q63HK3 967 aa24.03■■□□□ 1.44
LTBP4-239ENST00000622565 SAGE1Q9NXZ1 904 aa24.03■■□□□ 1.44
LTBP4-239ENST00000622565 TCP10L2B9ZVM9 353 aa24.02■■□□□ 1.44
LTBP4-239ENST00000622565 PHKA1P46020 1223 aa24.02■■□□□ 1.44
LTBP4-239ENST00000622565 HDLBPQ00341 1268 aaKnown RBP24.02■■□□□ 1.44
LTBP4-239ENST00000622565 CLMNQ96JQ2 1002 aa24.02■■□□□ 1.44
LTBP4-239ENST00000622565 TEPSINQ96N21 525 aa24.02■■□□□ 1.44
LTBP4-239ENST00000622565 ZBED9Q6R2W3 1325 aa24.02■■□□□ 1.44
LTBP4-239ENST00000622565 PNMA6EA0A0J9YXQ4 647 aa24.01■■□□□ 1.43
LTBP4-239ENST00000622565 CACNB3P54284 484 aa24.01■■□□□ 1.43
LTBP4-239ENST00000622565 USP2O75604 605 aaPredicted RBP24■■□□□ 1.43
LTBP4-239ENST00000622565 GNAI2P04899 355 aa24■■□□□ 1.43
LTBP4-239ENST00000622565 TIMM10P62072 90 aa24■■□□□ 1.43
LTBP4-239ENST00000622565 TFCP2Q12800 502 aa24■■□□□ 1.43
LTBP4-239ENST00000622565 APOBEC3HQ6NTF7 200 aaKnown RBP24■■□□□ 1.43
LTBP4-239ENST00000622565 TEKT1Q969V4 418 aa24■■□□□ 1.43
LTBP4-239ENST00000622565 TMEM39BQ9GZU3 492 aa24■■□□□ 1.43
LTBP4-239ENST00000622565 RLBP1P12271 317 aa23.99■■□□□ 1.43
LTBP4-239ENST00000622565 SUPT20HL1Q3ZLR7 823 aa23.99■■□□□ 1.43
LTBP4-239ENST00000622565 SPRYD7Q5W111 196 aa23.99■■□□□ 1.43
LTBP4-239ENST00000622565 ABHD8Q96I13 439 aa23.99■■□□□ 1.43
LTBP4-239ENST00000622565 ZDHHC15Q96MV8 337 aa23.99■■□□□ 1.43
LTBP4-239ENST00000622565 MRIQ9BWK5 157 aa23.99■■□□□ 1.43
LTBP4-239ENST00000622565 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.99■■□□□ 1.43
LTBP4-239ENST00000622565 SUGT1Q9Y2Z0 365 aa23.99■■□□□ 1.43
LTBP4-239ENST00000622565 REM2Q8IYK8 340 aaPredicted RBP23.98■■□□□ 1.43
LTBP4-239ENST00000622565 WDR66Q8TBY9 1149 aa23.98■■□□□ 1.43
LTBP4-239ENST00000622565 PPP1R12BO60237 982 aaPredicted RBP23.97■■□□□ 1.43
LTBP4-239ENST00000622565 PRDX5P30044 214 aa23.97■■□□□ 1.43
LTBP4-239ENST00000622565 TM4SF4P48230 202 aa23.97■■□□□ 1.43
LTBP4-239ENST00000622565 TNFAIP1Q13829 316 aa23.97■■□□□ 1.43
LTBP4-239ENST00000622565 CCDC102BQ68D86 513 aa23.97■■□□□ 1.43
LTBP4-239ENST00000622565 A0A1B0GUL7 405 aa23.96■■□□□ 1.43
LTBP4-239ENST00000622565 DIXDC1Q155Q3 683 aa23.96■■□□□ 1.43
LTBP4-239ENST00000622565 HHIPL2Q6UWX4 724 aa23.96■■□□□ 1.43
LTBP4-239ENST00000622565 SLC10A4Q96EP9 437 aa23.96■■□□□ 1.43
LTBP4-239ENST00000622565 MYH13Q9UKX3 1938 aa23.96■■□□□ 1.43
LTBP4-239ENST00000622565 MAST3O60307 1309 aa23.95■■□□□ 1.42
LTBP4-239ENST00000622565 CASP8AP2Q9UKL3 1982 aa23.95■■□□□ 1.42
LTBP4-239ENST00000622565 MCOLN1Q9GZU1 580 aa23.95■■□□□ 1.42
LTBP4-239ENST00000622565 TBC1D8O95759 1140 aa23.94■■□□□ 1.42
LTBP4-239ENST00000622565 GJA5P36382 358 aa23.94■■□□□ 1.42
LTBP4-239ENST00000622565 XAGE2Q96GT9 111 aa23.94■■□□□ 1.42
LTBP4-239ENST00000622565 WNK4Q96J92 1243 aa23.94■■□□□ 1.42
LTBP4-239ENST00000622565 C1orf115Q9H7X2 142 aa23.94■■□□□ 1.42
LTBP4-239ENST00000622565 GNL3LQ9NVN8 582 aaKnown RBP23.94■■□□□ 1.42
LTBP4-239ENST00000622565 DAGLAQ9Y4D2 1042 aa23.94■■□□□ 1.42
LTBP4-239ENST00000622565 SALL1Q9NSC2 1324 aa23.93■■□□□ 1.42
LTBP4-239ENST00000622565 OTOFQ9HC10 1997 aa23.93■■□□□ 1.42
LTBP4-239ENST00000622565 AKAP11Q9UKA4 1901 aa23.93■■□□□ 1.42
LTBP4-239ENST00000622565 ZBTB22O15209 634 aa23.93■■□□□ 1.42
LTBP4-239ENST00000622565 IREB2P48200 963 aaKnown RBP23.93■■□□□ 1.42
LTBP4-239ENST00000622565 RASGRF1Q13972 1273 aa23.93■■□□□ 1.42
LTBP4-239ENST00000622565 DENND2AQ9ULE3 1009 aa23.93■■□□□ 1.42
LTBP4-239ENST00000622565 SEMA3EO15041 775 aa23.92■■□□□ 1.42
LTBP4-239ENST00000622565 ZBTB7BO15156 539 aaPredicted RBP23.92■■□□□ 1.42
LTBP4-239ENST00000622565 TNNI2P48788 182 aa23.92■■□□□ 1.42
LTBP4-239ENST00000622565 DGKZQ13574 1117 aa23.92■■□□□ 1.42
LTBP4-239ENST00000622565 POLA2Q14181 598 aa23.92■■□□□ 1.42
LTBP4-239ENST00000622565 R3HDMLQ9H3Y0 253 aa23.92■■□□□ 1.42
LTBP4-239ENST00000622565 LDHBP07195 334 aaKnown RBP23.91■■□□□ 1.42
LTBP4-239ENST00000622565 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.91■■□□□ 1.42
LTBP4-239ENST00000622565 ANKRD13AQ8IZ07 590 aa23.91■■□□□ 1.42
LTBP4-239ENST00000622565 AKAP2Q9Y2D5 859 aa23.91■■□□□ 1.42
LTBP4-239ENST00000622565 UNCXA6NJT0 531 aa23.9■■□□□ 1.42
LTBP4-239ENST00000622565 SREBF2Q12772 1141 aa23.9■■□□□ 1.42
LTBP4-239ENST00000622565 CDC42EP5Q6NZY7 148 aa23.9■■□□□ 1.42
LTBP4-239ENST00000622565 FAM83AQ86UY5 434 aa23.9■■□□□ 1.42
LTBP4-239ENST00000622565 ITPRIPQ8IWB1 547 aa23.9■■□□□ 1.42
LTBP4-239ENST00000622565 FTSJ3Q8IY81 847 aaKnown RBP23.9■■□□□ 1.42
LTBP4-239ENST00000622565 CNKSR2Q8WXI2 1034 aa23.9■■□□□ 1.42
LTBP4-239ENST00000622565 NEUROD6Q96NK8 337 aa23.9■■□□□ 1.42
LTBP4-239ENST00000622565 ELP3Q9H9T3 547 aa23.9■■□□□ 1.42
LTBP4-239ENST00000622565 ZBTB48P10074 688 aaPredicted RBP23.89■■□□□ 1.41
LTBP4-239ENST00000622565 ATP8B2P98198 1209 aa23.89■■□□□ 1.41
LTBP4-239ENST00000622565 FKBP1CQ5VVH2 108 aa23.89■■□□□ 1.41
LTBP4-239ENST00000622565 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.89■■□□□ 1.412e-6■□□□□ 8.3
LTBP4-239ENST00000622565 SSH3Q8TE77 659 aa23.89■■□□□ 1.41
LTBP4-239ENST00000622565 NFIAQ12857 509 aa23.88■■□□□ 1.41
LTBP4-239ENST00000622565 G3BP1Q13283 466 aaKnown RBP eCLIP23.88■■□□□ 1.41
LTBP4-239ENST00000622565 PI16Q6UXB8 463 aa23.88■■□□□ 1.41
LTBP4-239ENST00000622565 PANK1Q8TE04 598 aa23.88■■□□□ 1.41
LTBP4-239ENST00000622565 TMOD2Q9NZR1 351 aa23.88■■□□□ 1.41
LTBP4-239ENST00000622565 LAMB1P07942 1786 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms