RNA–Protein interactions for RNA: ENST00000622044.1

PCDHGA11-203, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA11, Length 3,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-203ENST00000622044 TXLNBQ8N3L3 684 aa13.08□□□□□ -0.32
PCDHGA11-203ENST00000622044 KAZALD1Q96I82 304 aa13.08□□□□□ -0.32
PCDHGA11-203ENST00000622044 VPS37DQ86XT2 251 aa13.08□□□□□ -0.32
PCDHGA11-203ENST00000622044 CAGE1Q8TC20 777 aa13.08□□□□□ -0.32
PCDHGA11-203ENST00000622044 SMARCE1Q969G3 411 aa13.08□□□□□ -0.32
PCDHGA11-203ENST00000622044 RAI14Q9P0K7 980 aa13.08□□□□□ -0.32
PCDHGA11-203ENST00000622044 PPP2R2CQ9Y2T4 447 aa13.08□□□□□ -0.32
PCDHGA11-203ENST00000622044 DLC1Q96QB1 1528 aa13.08□□□□□ -0.32
PCDHGA11-203ENST00000622044 ERICH2A1L162 156 aa13.07□□□□□ -0.32
PCDHGA11-203ENST00000622044 COBLO75128 1261 aa13.07□□□□□ -0.32
PCDHGA11-203ENST00000622044 CTDNEP1O95476 244 aa13.07□□□□□ -0.32
PCDHGA11-203ENST00000622044 FILIP1LQ4L180 1135 aa13.07□□□□□ -0.32
PCDHGA11-203ENST00000622044 AXDND1Q5T1B0 1012 aaPredicted RBP13.07□□□□□ -0.32
PCDHGA11-203ENST00000622044 PI16Q6UXB8 463 aa13.07□□□□□ -0.32
PCDHGA11-203ENST00000622044 CERS3Q8IU89 383 aa13.07□□□□□ -0.32
PCDHGA11-203ENST00000622044 HAUS7Q99871 368 aa13.07□□□□□ -0.32
PCDHGA11-203ENST00000622044 ZKSCAN3Q9BRR0 538 aa13.07□□□□□ -0.32
PCDHGA11-203ENST00000622044 RIMS1Q86UR5 1692 aaKnown RBP13.07□□□□□ -0.32
PCDHGA11-203ENST00000622044 IFIT3O14879 490 aaKnown RBP13.07□□□□□ -0.32
PCDHGA11-203ENST00000622044 CDKL5O76039 1030 aa13.07□□□□□ -0.32
PCDHGA11-203ENST00000622044 DHX8Q14562 1220 aaKnown RBP13.07□□□□□ -0.32
PCDHGA11-203ENST00000622044 TSR1Q2NL82 804 aaKnown RBP13.07□□□□□ -0.32
PCDHGA11-203ENST00000622044 METTL24Q5JXM2 366 aa13.07□□□□□ -0.32
PCDHGA11-203ENST00000622044 ZNF569Q5MCW4 686 aa13.07□□□□□ -0.32
PCDHGA11-203ENST00000622044 GOLGA1Q92805 767 aa13.07□□□□□ -0.32
PCDHGA11-203ENST00000622044 TMEM131LA2VDJ0 1609 aa13.07□□□□□ -0.32
PCDHGA11-203ENST00000622044 USP42Q9H9J4 1324 aaKnown RBP13.07□□□□□ -0.32
PCDHGA11-203ENST00000622044 B4E1Z4 1266 aa13.07□□□□□ -0.32
PCDHGA11-203ENST00000622044 TULP1O00294 542 aaPredicted RBP13.07□□□□□ -0.32
PCDHGA11-203ENST00000622044 ERLIN1O75477 346 aa13.07□□□□□ -0.32
PCDHGA11-203ENST00000622044 SNRPA1P09661 255 aaKnown RBP13.07□□□□□ -0.32
PCDHGA11-203ENST00000622044 ZSCAN26Q16670 478 aa13.07□□□□□ -0.32
PCDHGA11-203ENST00000622044 TMEM67Q5HYA8 995 aa13.07□□□□□ -0.32
PCDHGA11-203ENST00000622044 TRIM22Q8IYM9 498 aa13.07□□□□□ -0.32
PCDHGA11-203ENST00000622044 CMTR1Q8N1G2 835 aaKnown RBP13.07□□□□□ -0.32
PCDHGA11-203ENST00000622044 FBXO18Q8NFZ0 1043 aa13.07□□□□□ -0.32
PCDHGA11-203ENST00000622044 GDAP1L1Q96MZ0 367 aa13.07□□□□□ -0.32
PCDHGA11-203ENST00000622044 NRKQ7Z2Y5 1582 aa13.07□□□□□ -0.32
PCDHGA11-203ENST00000622044 ANKRD26Q9UPS8 1709 aa13.07□□□□□ -0.32
PCDHGA11-203ENST00000622044 PSDA5PKW4 1024 aaPredicted RBP13.06□□□□□ -0.32
PCDHGA11-203ENST00000622044 GPTP24298 496 aa13.06□□□□□ -0.32
PCDHGA11-203ENST00000622044 SRRTQ9BXP5 876 aaKnown RBP13.06□□□□□ -0.32
PCDHGA11-203ENST00000622044 RTEL1Q9NZ71 1219 aa13.06□□□□□ -0.32
PCDHGA11-203ENST00000622044 RSPH14Q9UHP6 348 aa13.06□□□□□ -0.32
PCDHGA11-203ENST00000622044 KCNH3Q9ULD8 1083 aa13.06□□□□□ -0.32
PCDHGA11-203ENST00000622044 ANKRD65E5RJM6 399 aa13.06□□□□□ -0.32
PCDHGA11-203ENST00000622044 POLR2DO15514 142 aaKnown RBP13.06□□□□□ -0.32
PCDHGA11-203ENST00000622044 EIF3JO75822 258 aaKnown RBP13.06□□□□□ -0.32
PCDHGA11-203ENST00000622044 ST5P78524 1137 aa13.06□□□□□ -0.32
PCDHGA11-203ENST00000622044 PDE4CQ08493 712 aa13.06□□□□□ -0.32
PCDHGA11-203ENST00000622044 KRT40Q6A162 431 aa13.06□□□□□ -0.32
PCDHGA11-203ENST00000622044 RBM43Q6ZSC3 357 aaKnown RBP13.06□□□□□ -0.32
PCDHGA11-203ENST00000622044 BRAPQ7Z569 592 aa13.06□□□□□ -0.32
PCDHGA11-203ENST00000622044 GRAMD1CQ8IYS0 662 aa13.06□□□□□ -0.32
PCDHGA11-203ENST00000622044 STAMQ92783 540 aa13.06□□□□□ -0.32
PCDHGA11-203ENST00000622044 AIDAQ96BJ3 306 aa13.06□□□□□ -0.32
PCDHGA11-203ENST00000622044 TBX22Q9Y458 520 aa13.06□□□□□ -0.32
PCDHGA11-203ENST00000622044 PCDHA5Q9Y5H7 936 aa13.06□□□□□ -0.32
PCDHGA11-203ENST00000622044 SLC12A7Q9Y666 1083 aa13.06□□□□□ -0.32
PCDHGA11-203ENST00000622044 MAST3O60307 1309 aa13.06□□□□□ -0.32
PCDHGA11-203ENST00000622044 ATL3Q6DD88 541 aa13.06□□□□□ -0.32
PCDHGA11-203ENST00000622044 DHX58Q96C10 678 aa13.06□□□□□ -0.32
PCDHGA11-203ENST00000622044 SIRT1Q96EB6 747 aa13.06□□□□□ -0.32
PCDHGA11-203ENST00000622044 PUS3Q9BZE2 481 aaKnown RBP13.06□□□□□ -0.32
PCDHGA11-203ENST00000622044 IRX2Q9BZI1 471 aaPredicted RBP13.06□□□□□ -0.32
PCDHGA11-203ENST00000622044 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.06□□□□□ -0.32
PCDHGA11-203ENST00000622044 RABEP2Q9H5N1 569 aa13.06□□□□□ -0.32
PCDHGA11-203ENST00000622044 ZNF446Q9NWS9 450 aa13.06□□□□□ -0.32
PCDHGA11-203ENST00000622044 ZBTB43O43298 467 aa13.05□□□□□ -0.32
PCDHGA11-203ENST00000622044 SLC9C2Q5TAH2 1124 aa13.05□□□□□ -0.32
PCDHGA11-203ENST00000622044 HINFPQ9BQA5 517 aa13.05□□□□□ -0.32
PCDHGA11-203ENST00000622044 HELLSQ9NRZ9 838 aa13.05□□□□□ -0.32
PCDHGA11-203ENST00000622044 CWC25Q9NXE8 425 aaPredicted RBP13.05□□□□□ -0.32
PCDHGA11-203ENST00000622044 DACH1Q9UI36 760 aa13.05□□□□□ -0.32
PCDHGA11-203ENST00000622044 TBC1D2BQ9UPU7 963 aa13.05□□□□□ -0.32
PCDHGA11-203ENST00000622044 ZNF609O15014 1411 aa13.05□□□□□ -0.32
PCDHGA11-203ENST00000622044 MED23Q9ULK4 1368 aa13.05□□□□□ -0.32
PCDHGA11-203ENST00000622044 M0R2C6 588 aa13.05□□□□□ -0.32
PCDHGA11-203ENST00000622044 ARHGAP6O43182 974 aa13.05□□□□□ -0.32
PCDHGA11-203ENST00000622044 WDHD1O75717 1129 aaPredicted RBP13.05□□□□□ -0.32
PCDHGA11-203ENST00000622044 YEATS4O95619 227 aa13.05□□□□□ -0.32
PCDHGA11-203ENST00000622044 FGAP02671 866 aa13.05□□□□□ -0.32
PCDHGA11-203ENST00000622044 CCT6AP40227 531 aaKnown RBP13.05□□□□□ -0.32
PCDHGA11-203ENST00000622044 NBPF11Q86T75 865 aa13.05□□□□□ -0.32
PCDHGA11-203ENST00000622044 NUP88Q99567 741 aaPredicted RBP13.05□□□□□ -0.32
PCDHGA11-203ENST00000622044 KCNJ14Q9UNX9 436 aa13.05□□□□□ -0.32
PCDHGA11-203ENST00000622044 CCDC175P0C221 793 aa13.05□□□□□ -0.32
PCDHGA11-203ENST00000622044 ANKRD20A12PQ8NF67 263 aa13.05□□□□□ -0.32
PCDHGA11-203ENST00000622044 SMARCC2Q8TAQ2 1214 aa13.05□□□□□ -0.32
PCDHGA11-203ENST00000622044 COPRSQ9NQ92 184 aa13.05□□□□□ -0.32
PCDHGA11-203ENST00000622044 USP31Q70CQ4 1352 aa13.04□□□□□ -0.32
PCDHGA11-203ENST00000622044 ATF3P18847 181 aa13.04□□□□□ -0.32
PCDHGA11-203ENST00000622044 TDO2P48775 406 aa13.04□□□□□ -0.32
PCDHGA11-203ENST00000622044 CHMP4BP1P59074 171 aa13.04□□□□□ -0.32
PCDHGA11-203ENST00000622044 NOM1Q5C9Z4 860 aaKnown RBP13.04□□□□□ -0.32
PCDHGA11-203ENST00000622044 WWC2Q6AWC2 1192 aa13.04□□□□□ -0.32
PCDHGA11-203ENST00000622044 OSBP2Q969R2 916 aa13.04□□□□□ -0.32
PCDHGA11-203ENST00000622044 ZNF274Q96GC6 653 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA11-203ENST00000622044 OSBPL5Q9H0X9 879 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA11-203ENST00000622044 IPO7O95373 1038 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms