RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 CYP7A1P22680 504 aa12.79□□□□□ -0.36
CPNE3-212ENST00000621783 HSPA4P34932 840 aa12.79□□□□□ -0.36
CPNE3-212ENST00000621783 KIAA2012Q0VF49 1180 aa12.79□□□□□ -0.36
CPNE3-212ENST00000621783 DCAF8Q5TAQ9 597 aa12.79□□□□□ -0.36
CPNE3-212ENST00000621783 VPS53Q5VIR6 699 aa12.79□□□□□ -0.36
CPNE3-212ENST00000621783 SPTY2D1Q68D10 685 aaPredicted RBP12.79□□□□□ -0.36
CPNE3-212ENST00000621783 NAA16Q6N069 864 aaPredicted RBP12.79□□□□□ -0.36
CPNE3-212ENST00000621783 ZNF384Q8TF68 577 aa12.79□□□□□ -0.36
CPNE3-212ENST00000621783 MAP4K1Q92918 833 aa12.79□□□□□ -0.36
CPNE3-212ENST00000621783 DBNDD1Q9H9R9 158 aa12.79□□□□□ -0.36
CPNE3-212ENST00000621783 PALD1Q9ULE6 856 aa12.79□□□□□ -0.36
CPNE3-212ENST00000621783 RBM8AQ9Y5S9 174 aaKnown RBP12.79□□□□□ -0.36
CPNE3-212ENST00000621783 PSME4Q14997 1843 aa12.78□□□□□ -0.36
CPNE3-212ENST00000621783 MBD4O95243 580 aa12.78□□□□□ -0.36
CPNE3-212ENST00000621783 LDHBP07195 334 aaKnown RBP12.78□□□□□ -0.36
CPNE3-212ENST00000621783 GTF2IP78347 998 aa12.78□□□□□ -0.36
CPNE3-212ENST00000621783 MECOMQ03112 1051 aa12.78□□□□□ -0.36
CPNE3-212ENST00000621783 GRIK5Q16478 980 aa12.78□□□□□ -0.36
CPNE3-212ENST00000621783 ADGRA1Q86SQ6 560 aa12.78□□□□□ -0.36
CPNE3-212ENST00000621783 DZIP1Q86YF9 867 aaKnown RBP12.78□□□□□ -0.36
CPNE3-212ENST00000621783 TBC1D22AQ8WUA7 517 aa12.78□□□□□ -0.36
CPNE3-212ENST00000621783 NSUN4Q96CB9 384 aaKnown RBP12.78□□□□□ -0.36
CPNE3-212ENST00000621783 DSCC1Q9BVC3 393 aa12.78□□□□□ -0.36
CPNE3-212ENST00000621783 BCS1LQ9Y276 419 aa12.78□□□□□ -0.36
CPNE3-212ENST00000621783 SCN9AQ15858 1988 aa12.78□□□□□ -0.36
CPNE3-212ENST00000621783 LAMA4Q16363 1823 aa12.77□□□□□ -0.37
CPNE3-212ENST00000621783 FOXP2O15409 715 aa12.77□□□□□ -0.37
CPNE3-212ENST00000621783 IGSF3O75054 1194 aa12.77□□□□□ -0.37
CPNE3-212ENST00000621783 HSPD1P10809 573 aaKnown RBP12.77□□□□□ -0.37
CPNE3-212ENST00000621783 ANAPC15P60006 121 aa12.77□□□□□ -0.37
CPNE3-212ENST00000621783 NECTIN1Q15223 517 aa12.77□□□□□ -0.37
CPNE3-212ENST00000621783 MFSD14BQ5SR56 506 aa12.77□□□□□ -0.37
CPNE3-212ENST00000621783 PODNQ7Z5L7 613 aa12.77□□□□□ -0.37
CPNE3-212ENST00000621783 LCORLQ8N3X6 602 aa12.77□□□□□ -0.37
CPNE3-212ENST00000621783 MIGA1Q8NAN2 632 aa12.77□□□□□ -0.37
CPNE3-212ENST00000621783 FBXW7Q969H0 707 aa12.77□□□□□ -0.37
CPNE3-212ENST00000621783 AIDAQ96BJ3 306 aa12.77□□□□□ -0.37
CPNE3-212ENST00000621783 FHDC1Q9C0D6 1143 aaPredicted RBP12.77□□□□□ -0.37
CPNE3-212ENST00000621783 ZNF277Q9NRM2 450 aaPredicted RBP12.77□□□□□ -0.37
CPNE3-212ENST00000621783 U3KPZ7 1027 aaPredicted RBP12.77□□□□□ -0.37
CPNE3-212ENST00000621783 SLC27A2O14975 620 aa12.76□□□□□ -0.37
CPNE3-212ENST00000621783 CREB3L3Q68CJ9 461 aa12.76□□□□□ -0.37
CPNE3-212ENST00000621783 TMED8Q6PL24 325 aaPredicted RBP12.76□□□□□ -0.37
CPNE3-212ENST00000621783 IL17RAQ96F46 866 aa12.76□□□□□ -0.37
CPNE3-212ENST00000621783 TAOK3Q9H2K8 898 aa12.76□□□□□ -0.37
CPNE3-212ENST00000621783 ARMT1Q9H993 441 aa12.76□□□□□ -0.37
CPNE3-212ENST00000621783 ADAMTSL1Q8N6G6 1762 aa12.76□□□□□ -0.37
CPNE3-212ENST00000621783 MAGEB6P1A0A0J9YX57 407 aa12.75□□□□□ -0.37
CPNE3-212ENST00000621783 NFKBIEO00221 500 aa12.75□□□□□ -0.37
CPNE3-212ENST00000621783 IARSP41252 1262 aaKnown RBP12.75□□□□□ -0.37
CPNE3-212ENST00000621783 GSTO1P78417 241 aa12.75□□□□□ -0.37
CPNE3-212ENST00000621783 TTLL5Q6EMB2 1281 aa12.75□□□□□ -0.37
CPNE3-212ENST00000621783 RASEFQ8IZ41 740 aa12.75□□□□□ -0.37
CPNE3-212ENST00000621783 LARGE2Q8N3Y3 721 aa12.75□□□□□ -0.37
CPNE3-212ENST00000621783 CERS5Q8N5B7 392 aa12.75□□□□□ -0.37
CPNE3-212ENST00000621783 KCNB2Q92953 911 aa12.75□□□□□ -0.37
CPNE3-212ENST00000621783 DDRGK1Q96HY6 314 aa12.75□□□□□ -0.37
CPNE3-212ENST00000621783 STRBPQ96SI9 672 aaKnown RBP12.75□□□□□ -0.37
CPNE3-212ENST00000621783 RIOK1Q9BRS2 568 aaKnown RBP12.75□□□□□ -0.37
CPNE3-212ENST00000621783 VPS33BQ9H267 617 aa12.75□□□□□ -0.37
CPNE3-212ENST00000621783 SNX14Q9Y5W7 946 aa12.75□□□□□ -0.37
CPNE3-212ENST00000621783 TIAM2Q8IVF5 1701 aa12.74□□□□□ -0.37
CPNE3-212ENST00000621783 MROH7-TTC4A0A0A0MT08 1334 aa12.74□□□□□ -0.37
CPNE3-212ENST00000621783 LTBP3Q9NS15 1303 aa12.74□□□□□ -0.37
CPNE3-212ENST00000621783 YDJCA8MPS7 323 aa12.74□□□□□ -0.37
CPNE3-212ENST00000621783 FKBP1AP62942 108 aaKnown RBP12.74□□□□□ -0.37
CPNE3-212ENST00000621783 DYNLL1P63167 89 aaKnown RBP12.74□□□□□ -0.37
CPNE3-212ENST00000621783 RABEP1Q15276 862 aa12.74□□□□□ -0.37
CPNE3-212ENST00000621783 DIXDC1Q155Q3 683 aa12.74□□□□□ -0.37
CPNE3-212ENST00000621783 STRIP1Q5VSL9 837 aa12.74□□□□□ -0.37
CPNE3-212ENST00000621783 RNF20Q5VTR2 975 aa12.74□□□□□ -0.37
CPNE3-212ENST00000621783 MXD3Q9BW11 206 aa12.74□□□□□ -0.37
CPNE3-212ENST00000621783 KCNQ5Q9NR82 932 aa12.74□□□□□ -0.37
CPNE3-212ENST00000621783 SUGT1Q9Y2Z0 365 aa12.74□□□□□ -0.37
CPNE3-212ENST00000621783 MYH2Q9UKX2 1941 aa12.74□□□□□ -0.37
CPNE3-212ENST00000621783 RPAP1Q9BWH6 1393 aaPredicted RBP12.73□□□□□ -0.37
CPNE3-212ENST00000621783 GAKO14976 1311 aa12.73□□□□□ -0.37
CPNE3-212ENST00000621783 ZMYM6O95789 1325 aa12.73□□□□□ -0.37
CPNE3-212ENST00000621783 USP17L3A6NCW0 530 aa12.73□□□□□ -0.37
CPNE3-212ENST00000621783 USP17L4A6NCW7 530 aa12.73□□□□□ -0.37
CPNE3-212ENST00000621783 GNAT2P19087 354 aa12.73□□□□□ -0.37
CPNE3-212ENST00000621783 RASSF7Q02833 373 aa12.73□□□□□ -0.37
CPNE3-212ENST00000621783 DACT2Q5SW24 774 aa12.73□□□□□ -0.37
CPNE3-212ENST00000621783 USP17L1Q7RTZ2 530 aa12.73□□□□□ -0.37
CPNE3-212ENST00000621783 NIM1KQ8IY84 436 aa12.73□□□□□ -0.37
CPNE3-212ENST00000621783 EPB41L4AQ9HCS5 686 aaPredicted RBP12.73□□□□□ -0.37
CPNE3-212ENST00000621783 AATFQ9NY61 560 aaKnown RBP eCLIP12.73□□□□□ -0.37
CPNE3-212ENST00000621783 TAF6LQ9Y6J9 622 aa12.73□□□□□ -0.37
CPNE3-212ENST00000621783 SLC4A4Q9Y6R1 1079 aa12.73□□□□□ -0.37
CPNE3-212ENST00000621783 LAMB1P07942 1786 aa12.73□□□□□ -0.37
CPNE3-212ENST00000621783 NAV1Q8NEY1 1877 aa12.72□□□□□ -0.37
CPNE3-212ENST00000621783 DDX60LQ5H9U9 1706 aaKnown RBP12.72□□□□□ -0.37
CPNE3-212ENST00000621783 PRKAB2O43741 272 aa12.72□□□□□ -0.37
CPNE3-212ENST00000621783 LDHCP07864 332 aa12.72□□□□□ -0.37
CPNE3-212ENST00000621783 CYP21A2P08686 494 aa12.72□□□□□ -0.37
CPNE3-212ENST00000621783 ZKSCAN1P17029 563 aaPredicted RBP12.72□□□□□ -0.37
CPNE3-212ENST00000621783 GSG1L2A8MUP6 293 aa12.71□□□□□ -0.37
CPNE3-212ENST00000621783 F8W031 263 aaPredicted RBP12.71□□□□□ -0.37
CPNE3-212ENST00000621783 FGAP02671 866 aa12.71□□□□□ -0.37
CPNE3-212ENST00000621783 APPP05067 770 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms