RNA–Protein interactions for RNA: ENST00000620916.2

MATR3-228, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 3,134 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-228ENST00000620916 LMCD1Q9NZU5 365 aa5.93□□□□□ -1.46
MATR3-228ENST00000620916 PLEKHH1Q9ULM0 1364 aa5.93□□□□□ -1.46
MATR3-228ENST00000620916 A0A087WUV0 522 aaPredicted RBP5.93□□□□□ -1.46
MATR3-228ENST00000620916 EIF3CLB5ME19 914 aaKnown RBP5.93□□□□□ -1.46
MATR3-228ENST00000620916 TPPPO94811 219 aa5.93□□□□□ -1.46
MATR3-228ENST00000620916 RAB27AP51159 221 aa5.93□□□□□ -1.46
MATR3-228ENST00000620916 PKN1Q16512 942 aa5.93□□□□□ -1.46
MATR3-228ENST00000620916 CCDC184Q52MB2 194 aa5.93□□□□□ -1.46
MATR3-228ENST00000620916 C16orf87Q6PH81 154 aa5.93□□□□□ -1.46
MATR3-228ENST00000620916 EIF3CQ99613 913 aaKnown RBP5.93□□□□□ -1.46
MATR3-228ENST00000620916 IRX2Q9BZI1 471 aaPredicted RBP5.93□□□□□ -1.46
MATR3-228ENST00000620916 GIGYF1O75420 1035 aaPredicted RBP5.92□□□□□ -1.46
MATR3-228ENST00000620916 FMNL1O95466 1100 aaPredicted RBP5.92□□□□□ -1.46
MATR3-228ENST00000620916 HARSP12081 509 aaKnown RBP5.92□□□□□ -1.46
MATR3-228ENST00000620916 ZNF24P17028 368 aa5.92□□□□□ -1.46
MATR3-228ENST00000620916 ZFYVE27Q5T4F4 411 aa5.92□□□□□ -1.46
MATR3-228ENST00000620916 FILIP1Q7Z7B0 1213 aa5.92□□□□□ -1.46
MATR3-228ENST00000620916 ANKRD18AQ8IVF6 992 aa5.92□□□□□ -1.46
MATR3-228ENST00000620916 TRIM42Q8IWZ5 723 aa5.92□□□□□ -1.46
MATR3-228ENST00000620916 STAG2Q8N3U4 1231 aa5.92□□□□□ -1.46
MATR3-228ENST00000620916 PDCD7Q8N8D1 485 aaKnown RBP5.92□□□□□ -1.46
MATR3-228ENST00000620916 PHC3Q8NDX5 983 aa5.92□□□□□ -1.46
MATR3-228ENST00000620916 BICD1Q96G01 975 aa5.92□□□□□ -1.46
MATR3-228ENST00000620916 PCMTD1Q96MG8 357 aaPredicted RBP5.92□□□□□ -1.46
MATR3-228ENST00000620916 BEGAINQ9BUH8 593 aa5.92□□□□□ -1.46
MATR3-228ENST00000620916 UNC45AQ9H3U1 944 aa5.92□□□□□ -1.46
MATR3-228ENST00000620916 MKRN1Q9UHC7 482 aaKnown RBP5.92□□□□□ -1.46
MATR3-228ENST00000620916 BARX2Q9UMQ3 279 aaPredicted RBP5.92□□□□□ -1.46
MATR3-228ENST00000620916 YTHDC2Q9H6S0 1430 aaKnown RBP5.92□□□□□ -1.46
MATR3-228ENST00000620916 A0A0G2JS52 829 aa5.92□□□□□ -1.46
MATR3-228ENST00000620916 ACTN2P35609 894 aa5.92□□□□□ -1.46
MATR3-228ENST00000620916 SESN3P58005 492 aa5.92□□□□□ -1.46
MATR3-228ENST00000620916 KMT5BQ4FZB7 885 aa5.92□□□□□ -1.46
MATR3-228ENST00000620916 KIAA1524Q8TCG1 905 aa5.92□□□□□ -1.46
MATR3-228ENST00000620916 CDCA7Q9BWT1 371 aaPredicted RBP5.92□□□□□ -1.46
MATR3-228ENST00000620916 TMEM98Q9Y2Y6 226 aa5.92□□□□□ -1.46
MATR3-228ENST00000620916 SPDYE16A6NNV3 312 aaPredicted RBP5.92□□□□□ -1.46
MATR3-228ENST00000620916 SLC27A2O14975 620 aa5.92□□□□□ -1.46
MATR3-228ENST00000620916 STIP1P31948 543 aaKnown RBP5.92□□□□□ -1.46
MATR3-228ENST00000620916 IQCB1Q15051 598 aa5.92□□□□□ -1.46
MATR3-228ENST00000620916 ZSCAN23Q3MJ62 389 aa5.92□□□□□ -1.46
MATR3-228ENST00000620916 SOGA3Q5TF21 947 aa5.92□□□□□ -1.46
MATR3-228ENST00000620916 LRSAM1Q6UWE0 723 aa5.92□□□□□ -1.46
MATR3-228ENST00000620916 GBP6Q6ZN66 633 aa5.92□□□□□ -1.46
MATR3-228ENST00000620916 SPATA21Q7Z572 469 aa5.92□□□□□ -1.46
MATR3-228ENST00000620916 PMFBP1Q8TBY8 1022 aa5.92□□□□□ -1.46
MATR3-228ENST00000620916 BMP2KQ9NSY1 1161 aaPredicted RBP5.92□□□□□ -1.46
MATR3-228ENST00000620916 WNK3Q9BYP7 1800 aa5.91□□□□□ -1.46
MATR3-228ENST00000620916 PIK3C2GO75747 1445 aa5.91□□□□□ -1.46
MATR3-228ENST00000620916 CPDO75976 1380 aa5.91□□□□□ -1.46
MATR3-228ENST00000620916 LMO7Q8WWI1 1683 aa5.91□□□□□ -1.46
MATR3-228ENST00000620916 A6NJR5 290 aa5.91□□□□□ -1.46
MATR3-228ENST00000620916 TRIM37O94972 964 aa5.91□□□□□ -1.46
MATR3-228ENST00000620916 TADA2BQ86TJ2 420 aa5.91□□□□□ -1.46
MATR3-228ENST00000620916 TBC1D5Q92609 795 aa5.91□□□□□ -1.46
MATR3-228ENST00000620916 COL24A1Q17RW2 1714 aa5.91□□□□□ -1.46
MATR3-228ENST00000620916 OVOS2A0A0G2JMS6 1433 aa5.91□□□□□ -1.46
MATR3-228ENST00000620916 OVOS2A0A0J9YW53 1432 aa5.91□□□□□ -1.46
MATR3-228ENST00000620916 OVOS2Q6IE36 1432 aa5.91□□□□□ -1.46
MATR3-228ENST00000620916 SHTN1A0MZ66 631 aa5.91□□□□□ -1.46
MATR3-228ENST00000620916 FCHSD2O94868 740 aa5.91□□□□□ -1.46
MATR3-228ENST00000620916 RTN3O95197 1032 aaPredicted RBP5.91□□□□□ -1.46
MATR3-228ENST00000620916 KIF4AO95239 1232 aa5.91□□□□□ -1.46
MATR3-228ENST00000620916 GJA8P48165 433 aa5.91□□□□□ -1.46
MATR3-228ENST00000620916 CCNHP51946 323 aaPredicted RBP5.91□□□□□ -1.46
MATR3-228ENST00000620916 CCDC73Q6ZRK6 1079 aa5.91□□□□□ -1.46
MATR3-228ENST00000620916 NEK11Q8NG66 645 aa5.91□□□□□ -1.46
MATR3-228ENST00000620916 MIPOL1Q8TD10 442 aa5.91□□□□□ -1.46
MATR3-228ENST00000620916 CCDC34Q96HJ3 373 aa5.91□□□□□ -1.46
MATR3-228ENST00000620916 RBM17Q96I25 401 aaKnown RBP5.91□□□□□ -1.46
MATR3-228ENST00000620916 SPATA32Q96LK8 384 aa5.91□□□□□ -1.46
MATR3-228ENST00000620916 YIPF2Q9BWQ6 316 aa5.91□□□□□ -1.46
MATR3-228ENST00000620916 MTFR1LQ9H019 292 aa5.91□□□□□ -1.46
MATR3-228ENST00000620916 NPDC1Q9NQX5 325 aaPredicted RBP5.91□□□□□ -1.46
MATR3-228ENST00000620916 CLIP2Q9UDT6 1046 aa5.91□□□□□ -1.46
MATR3-228ENST00000620916 U2SURPO15042 1029 aaKnown RBP5.9□□□□□ -1.46
MATR3-228ENST00000620916 GALR2O43603 387 aaPredicted RBP5.9□□□□□ -1.46
MATR3-228ENST00000620916 ERLIN1O75477 346 aa5.9□□□□□ -1.46
MATR3-228ENST00000620916 CCDC175P0C221 793 aa5.9□□□□□ -1.46
MATR3-228ENST00000620916 H2AFXP16104 143 aaPredicted RBP5.9□□□□□ -1.46
MATR3-228ENST00000620916 HOXA10P31260 410 aaPredicted RBP5.9□□□□□ -1.46
MATR3-228ENST00000620916 PREPLQ4J6C6 727 aaPredicted RBP5.9□□□□□ -1.46
MATR3-228ENST00000620916 CDCA2Q69YH5 1023 aaPredicted RBP5.9□□□□□ -1.46
MATR3-228ENST00000620916 MIGA1Q8NAN2 632 aa5.9□□□□□ -1.46
MATR3-228ENST00000620916 MORC4Q8TE76 937 aa5.9□□□□□ -1.46
MATR3-228ENST00000620916 GDPD2Q9HCC8 539 aa5.9□□□□□ -1.46
MATR3-228ENST00000620916 USP25Q9UHP3 1055 aa5.9□□□□□ -1.46
MATR3-228ENST00000620916 ATP8A1Q9Y2Q0 1164 aa5.9□□□□□ -1.46
MATR3-228ENST00000620916 GPTP24298 496 aa5.9□□□□□ -1.46
MATR3-228ENST00000620916 ZNF394Q53GI3 561 aa5.9□□□□□ -1.46
MATR3-228ENST00000620916 WLSQ5T9L3 541 aa5.9□□□□□ -1.46
MATR3-228ENST00000620916 SFMBT2Q5VUG0 894 aa5.9□□□□□ -1.46
MATR3-228ENST00000620916 RCSD1Q6JBY9 416 aa5.9□□□□□ -1.46
MATR3-228ENST00000620916 SLC16A10Q8TF71 515 aa5.9□□□□□ -1.46
MATR3-228ENST00000620916 KCNN1Q92952 543 aa5.9□□□□□ -1.46
MATR3-228ENST00000620916 TRAIPQ9BWF2 469 aa5.9□□□□□ -1.46
MATR3-228ENST00000620916 TPX2Q9ULW0 747 aaKnown RBP5.9□□□□□ -1.46
MATR3-228ENST00000620916 COG6Q9Y2V7 657 aa5.9□□□□□ -1.46
MATR3-228ENST00000620916 FHOD1Q9Y613 1164 aa5.9□□□□□ -1.46
MATR3-228ENST00000620916 QSER1Q2KHR3 1735 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms