RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 ZNF652Q9Y2D9 606 aa8.01□□□□□ -1.13
NEDD9-216ENST00000620854 ANKARQ7Z5J8 1434 aa8.01□□□□□ -1.13
NEDD9-216ENST00000620854 PCDH11XQ9BZA7 1347 aa8.01□□□□□ -1.13
NEDD9-216ENST00000620854 PCDH11YQ9BZA8 1340 aa8.01□□□□□ -1.13
NEDD9-216ENST00000620854 A0A087WZG4 1122 aa8□□□□□ -1.13
NEDD9-216ENST00000620854 FANCGO15287 622 aa8□□□□□ -1.13
NEDD9-216ENST00000620854 SASH3O75995 380 aa8□□□□□ -1.13
NEDD9-216ENST00000620854 RAD51AP2Q09MP3 1159 aa8□□□□□ -1.13
NEDD9-216ENST00000620854 ADALQ6DHV7 355 aa8□□□□□ -1.13
NEDD9-216ENST00000620854 KLF18A0A0U1RQI7 1052 aa8□□□□□ -1.13
NEDD9-216ENST00000620854 TFRCP02786 760 aaKnown RBP8□□□□□ -1.13
NEDD9-216ENST00000620854 FDPSP14324 419 aaKnown RBP8□□□□□ -1.13
NEDD9-216ENST00000620854 SMC1AQ14683 1233 aaKnown RBP8□□□□□ -1.13
NEDD9-216ENST00000620854 ZNF827Q17R98 1081 aa8□□□□□ -1.13
NEDD9-216ENST00000620854 CCDC70Q6NSX1 233 aa8□□□□□ -1.13
NEDD9-216ENST00000620854 LMBR1LQ6UX01 489 aa8□□□□□ -1.13
NEDD9-216ENST00000620854 LINC00301Q8NCQ3 95 aa8□□□□□ -1.13
NEDD9-216ENST00000620854 CCDC150Q8NCX0 1101 aa8□□□□□ -1.13
NEDD9-216ENST00000620854 ACSBG1Q96GR2 724 aa8□□□□□ -1.13
NEDD9-216ENST00000620854 ZNF594Q96JF6 807 aaPredicted RBP8□□□□□ -1.13
NEDD9-216ENST00000620854 CEP89Q96ST8 783 aa8□□□□□ -1.13
NEDD9-216ENST00000620854 PREX1Q8TCU6 1659 aa8□□□□□ -1.13
NEDD9-216ENST00000620854 ADGRL3Q9HAR2 1447 aa8□□□□□ -1.13
NEDD9-216ENST00000620854 GOLGA8BA8MQT2 603 aa8□□□□□ -1.13
NEDD9-216ENST00000620854 PFKFB1P16118 471 aa8□□□□□ -1.13
NEDD9-216ENST00000620854 BICDL1Q6ZP65 573 aa8□□□□□ -1.13
NEDD9-216ENST00000620854 TRMT44Q8IYL2 757 aaKnown RBP8□□□□□ -1.13
NEDD9-216ENST00000620854 CCDC191Q8NCU4 936 aa8□□□□□ -1.13
NEDD9-216ENST00000620854 MPHOSPH8Q99549 860 aa8□□□□□ -1.13
NEDD9-216ENST00000620854 OSBPL5Q9H0X9 879 aaPredicted RBP8□□□□□ -1.13
NEDD9-216ENST00000620854 RNF216Q9NWF9 866 aaPredicted RBP8□□□□□ -1.13
NEDD9-216ENST00000620854 SYKP43405 635 aa7.99□□□□□ -1.13
NEDD9-216ENST00000620854 NAA16Q6N069 864 aaPredicted RBP7.99□□□□□ -1.13
NEDD9-216ENST00000620854 SAMD1Q6SPF0 538 aaPredicted RBP7.99□□□□□ -1.13
NEDD9-216ENST00000620854 ARHGEF25Q86VW2 580 aa7.99□□□□□ -1.13
NEDD9-216ENST00000620854 SMARCC2Q8TAQ2 1214 aa7.99□□□□□ -1.13
NEDD9-216ENST00000620854 L2HGDHQ9H9P8 463 aa7.99□□□□□ -1.13
NEDD9-216ENST00000620854 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.99□□□□□ -1.13
NEDD9-216ENST00000620854 HSPD1P10809 573 aaKnown RBP7.99□□□□□ -1.13
NEDD9-216ENST00000620854 CASQ1P31415 396 aa7.99□□□□□ -1.13
NEDD9-216ENST00000620854 GCKRQ14397 625 aa7.99□□□□□ -1.13
NEDD9-216ENST00000620854 CEP126Q9P2H0 1117 aa7.99□□□□□ -1.13
NEDD9-216ENST00000620854 LCMT1Q9UIC8 334 aa7.99□□□□□ -1.13
NEDD9-216ENST00000620854 MED23Q9ULK4 1368 aa7.99□□□□□ -1.13
NEDD9-216ENST00000620854 RICTORQ6R327 1708 aa7.99□□□□□ -1.13
NEDD9-216ENST00000620854 FOXN1O15353 648 aa7.99□□□□□ -1.13
NEDD9-216ENST00000620854 WDHD1O75717 1129 aaPredicted RBP7.99□□□□□ -1.13
NEDD9-216ENST00000620854 PTPN12Q05209 780 aaKnown RBP7.99□□□□□ -1.13
NEDD9-216ENST00000620854 ANKRD13DQ6ZTN6 518 aa7.99□□□□□ -1.13
NEDD9-216ENST00000620854 CCDC12Q8WUD4 166 aaPredicted RBP7.99□□□□□ -1.13
NEDD9-216ENST00000620854 SUGCTQ9HAC7 445 aa7.99□□□□□ -1.13
NEDD9-216ENST00000620854 DENND2AQ9ULE3 1009 aa7.99□□□□□ -1.13
NEDD9-216ENST00000620854 USP31Q70CQ4 1352 aa7.99□□□□□ -1.13
NEDD9-216ENST00000620854 ZNF609O15014 1411 aa7.99□□□□□ -1.13
NEDD9-216ENST00000620854 PEAK1Q9H792 1746 aa7.99□□□□□ -1.13
NEDD9-216ENST00000620854 NEURL1BA8MQ27 555 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 KIF28PB7ZC32 967 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 UBE2Q2LH0YL09 131 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 COBLO75128 1261 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 ZPR1O75312 459 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 ATP5JP18859 108 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 ZSCAN26Q16670 478 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 CCDC93Q567U6 631 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 KLHL10Q6JEL2 608 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 KLHL34Q8N239 644 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 PHKBQ93100 1093 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 CDCA7Q9BWT1 371 aaPredicted RBP7.98□□□□□ -1.13
NEDD9-216ENST00000620854 PARD6BQ9BYG5 372 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 ARFGAP3Q9NP61 516 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 IMPACTQ9P2X3 320 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 SPATA31D1Q6ZQQ2 1576 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 MTF1Q14872 753 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 NCAPHQ15003 741 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 MYSM1Q5VVJ2 828 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 HINFPQ9BQA5 517 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 MYL10Q9BUA6 226 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 PLEKHA4Q9H4M7 779 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 PAG1Q9NWQ8 432 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 RSPH14Q9UHP6 348 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 CARMIL3Q8ND23 1372 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 PSDA5PKW4 1024 aaPredicted RBP7.98□□□□□ -1.13
NEDD9-216ENST00000620854 NLRP12P59046 1061 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 USPL1Q5W0Q7 1092 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 TRIM65Q6PJ69 517 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 TOGARAM2Q6ZUX3 1019 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 BRINP3Q76B58 766 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 ADAMTS13Q76LX8 1427 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 VPS18Q9P253 973 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 PPP2R2CQ9Y2T4 447 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 A0A0U1RQJ8 604 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 IFIT1P09914 478 aaKnown RBP7.98□□□□□ -1.13
NEDD9-216ENST00000620854 RHOXF2BP0C7M4 288 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 GPTP24298 496 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 PPP2R3AQ06190 1150 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 TSGA10IPQ3SY00 556 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 CCDC158Q5M9N0 1113 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 CAGE1Q8TC20 777 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 ATRIPQ8WXE1 791 aa7.98□□□□□ -1.13
NEDD9-216ENST00000620854 SMARCC1Q92922 1105 aaPredicted RBP7.98□□□□□ -1.13
NEDD9-216ENST00000620854 RHOXF2Q9BQY4 288 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms