RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 PDE8BO95263 885 aa14.01□□□□□ -0.17
TARDBP-221ENST00000619555 IREB2P48200 963 aaKnown RBP14.01□□□□□ -0.17
TARDBP-221ENST00000619555 BCAMP50895 628 aa14.01□□□□□ -0.17
TARDBP-221ENST00000619555 NOM1Q5C9Z4 860 aaKnown RBP14.01□□□□□ -0.17
TARDBP-221ENST00000619555 CFHR5Q9BXR6 569 aa14.01□□□□□ -0.17
TARDBP-221ENST00000619555 TCP10L2B9ZVM9 353 aa14□□□□□ -0.17
TARDBP-221ENST00000619555 IGF2BP3O00425 579 aaKnown RBP eCLIP14□□□□□ -0.17
TARDBP-221ENST00000619555 FKTNO75072 461 aa14□□□□□ -0.17
TARDBP-221ENST00000619555 FRAT2O75474 233 aaPredicted RBP14□□□□□ -0.17
TARDBP-221ENST00000619555 ZBTB48P10074 688 aaPredicted RBP14□□□□□ -0.17
TARDBP-221ENST00000619555 GJA5P36382 358 aa14□□□□□ -0.17
TARDBP-221ENST00000619555 RFX5P48382 616 aaPredicted RBP14□□□□□ -0.17
TARDBP-221ENST00000619555 CAVIN4Q5BKX8 364 aa14□□□□□ -0.17
TARDBP-221ENST00000619555 IFNL1Q8IU54 200 aa14□□□□□ -0.17
TARDBP-221ENST00000619555 TEPSINQ96N21 525 aa14□□□□□ -0.17
TARDBP-221ENST00000619555 UNCXA6NJT0 531 aa13.99□□□□□ -0.17
TARDBP-221ENST00000619555 ALDH1A1P00352 501 aa13.99□□□□□ -0.17
TARDBP-221ENST00000619555 FGFR2P21802 821 aa13.99□□□□□ -0.17
TARDBP-221ENST00000619555 INHBEP58166 350 aa13.99□□□□□ -0.17
TARDBP-221ENST00000619555 TNFAIP1Q13829 316 aa13.99□□□□□ -0.17
TARDBP-221ENST00000619555 PKN2Q16513 984 aaKnown RBP13.99□□□□□ -0.17
TARDBP-221ENST00000619555 ALDH1L2Q3SY69 923 aa13.99□□□□□ -0.17
TARDBP-221ENST00000619555 ANKRD13AQ8IZ07 590 aa13.99□□□□□ -0.17
TARDBP-221ENST00000619555 TRMT2AQ8IZ69 625 aaKnown RBP13.99□□□□□ -0.17
TARDBP-221ENST00000619555 TMEM39BQ9GZU3 492 aa13.99□□□□□ -0.17
TARDBP-221ENST00000619555 SMC4Q9NTJ3 1288 aa13.99□□□□□ -0.17
TARDBP-221ENST00000619555 TNRC18O15417 2968 aaPredicted RBP13.99□□□□□ -0.17
TARDBP-221ENST00000619555 ARAP2Q8WZ64 1704 aa13.98□□□□□ -0.17
TARDBP-221ENST00000619555 EYA2O00167 538 aa13.98□□□□□ -0.17
TARDBP-221ENST00000619555 CACNB3P54284 484 aa13.98□□□□□ -0.17
TARDBP-221ENST00000619555 TBC1D22AQ8WUA7 517 aa13.98□□□□□ -0.17
TARDBP-221ENST00000619555 ELP3Q9H9T3 547 aa13.98□□□□□ -0.17
TARDBP-221ENST00000619555 IFIT1P09914 478 aaKnown RBP13.97□□□□□ -0.17
TARDBP-221ENST00000619555 HDLBPQ00341 1268 aaKnown RBP13.97□□□□□ -0.17
TARDBP-221ENST00000619555 PUM3Q15397 648 aaKnown RBP13.97□□□□□ -0.17
TARDBP-221ENST00000619555 FBXO46Q6PJ61 603 aaPredicted RBP13.97□□□□□ -0.17
TARDBP-221ENST00000619555 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.97□□□□□ -0.17
TARDBP-221ENST00000619555 PTPN18Q99952 460 aa13.97□□□□□ -0.17
TARDBP-221ENST00000619555 NOB1Q9ULX3 412 aaKnown RBP13.97□□□□□ -0.17
TARDBP-221ENST00000619555 OTOFQ9HC10 1997 aa13.96□□□□□ -0.17
TARDBP-221ENST00000619555 HOXD11P31277 338 aaPredicted RBP13.96□□□□□ -0.17
TARDBP-221ENST00000619555 TNNI2P48788 182 aa13.96□□□□□ -0.17
TARDBP-221ENST00000619555 MAP3K9P80192 1104 aa13.96□□□□□ -0.17
TARDBP-221ENST00000619555 ATG9AQ7Z3C6 839 aa13.96□□□□□ -0.17
TARDBP-221ENST00000619555 TEKT1Q969V4 418 aa13.96□□□□□ -0.17
TARDBP-221ENST00000619555 OPTNQ96CV9 577 aa13.96□□□□□ -0.17
TARDBP-221ENST00000619555 KIF16BQ96L93 1317 aa13.95□□□□□ -0.18
TARDBP-221ENST00000619555 TESPA1A2RU30 521 aaPredicted RBP13.95□□□□□ -0.18
TARDBP-221ENST00000619555 UBTFL1P0CB47 393 aaPredicted RBP13.95□□□□□ -0.18
TARDBP-221ENST00000619555 SLC5A1P13866 664 aa13.95□□□□□ -0.18
TARDBP-221ENST00000619555 CRHR2Q13324 411 aa13.95□□□□□ -0.18
TARDBP-221ENST00000619555 APOBEC3HQ6NTF7 200 aaKnown RBP13.95□□□□□ -0.18
TARDBP-221ENST00000619555 LPIN2Q92539 896 aa13.95□□□□□ -0.18
TARDBP-221ENST00000619555 ZDHHC15Q96MV8 337 aa13.95□□□□□ -0.18
TARDBP-221ENST00000619555 MRIQ9BWK5 157 aa13.95□□□□□ -0.18
TARDBP-221ENST00000619555 SIL1Q9H173 461 aa13.95□□□□□ -0.18
TARDBP-221ENST00000619555 RNF216Q9NWF9 866 aaPredicted RBP13.95□□□□□ -0.18
TARDBP-221ENST00000619555 KIAA0100Q14667 2235 aaKnown RBP13.95□□□□□ -0.18
TARDBP-221ENST00000619555 LAMB1P07942 1786 aa13.94□□□□□ -0.18
TARDBP-221ENST00000619555 HNRNPUQ00839 825 aaKnown RBP eCLIP13.94□□□□□ -0.18
TARDBP-221ENST00000619555 VGLL4Q14135 290 aa13.94□□□□□ -0.18
TARDBP-221ENST00000619555 OTUD7BQ6GQQ9 843 aa13.94□□□□□ -0.18
TARDBP-221ENST00000619555 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.94□□□□□ -0.183e-13■□□□□ 8.3
TARDBP-221ENST00000619555 MS4A4AQ96JQ5 239 aa13.94□□□□□ -0.18
TARDBP-221ENST00000619555 SUGT1Q9Y2Z0 365 aa13.94□□□□□ -0.18
TARDBP-221ENST00000619555 TRIM17Q9Y577 477 aa13.94□□□□□ -0.18
TARDBP-221ENST00000619555 HHIPL2Q6UWX4 724 aa13.93□□□□□ -0.18
TARDBP-221ENST00000619555 OTOP1Q7RTM1 612 aa13.93□□□□□ -0.18
TARDBP-221ENST00000619555 BRI3BPQ8WY22 251 aa13.93□□□□□ -0.18
TARDBP-221ENST00000619555 TMOD2Q9NZR1 351 aa13.93□□□□□ -0.18
TARDBP-221ENST00000619555 PA2G4Q9UQ80 394 aaKnown RBP13.93□□□□□ -0.18
TARDBP-221ENST00000619555 LRRFIP2Q9Y608 721 aaKnown RBP13.93□□□□□ -0.18
TARDBP-221ENST00000619555 MAST3O60307 1309 aa13.92□□□□□ -0.18
TARDBP-221ENST00000619555 MYH13Q9UKX3 1938 aa13.92□□□□□ -0.18
TARDBP-221ENST00000619555 CIAO1O76071 339 aa13.92□□□□□ -0.18
TARDBP-221ENST00000619555 CT47B1P0C2W7 299 aaPredicted RBP13.92□□□□□ -0.18
TARDBP-221ENST00000619555 CAP1Q01518 475 aa13.92□□□□□ -0.18
TARDBP-221ENST00000619555 ATP2B3Q16720 1220 aa13.92□□□□□ -0.18
TARDBP-221ENST00000619555 FAM83AQ86UY5 434 aa13.92□□□□□ -0.18
TARDBP-221ENST00000619555 WDR66Q8TBY9 1149 aa13.92□□□□□ -0.18
TARDBP-221ENST00000619555 CD99L2Q8TCZ2 262 aa13.92□□□□□ -0.18
TARDBP-221ENST00000619555 OTUD5Q96G74 571 aa13.92□□□□□ -0.18
TARDBP-221ENST00000619555 API5Q9BZZ5 524 aaKnown RBP13.92□□□□□ -0.18
TARDBP-221ENST00000619555 CEP126Q9P2H0 1117 aa13.92□□□□□ -0.18
TARDBP-221ENST00000619555 CSADQ9Y600 493 aa13.92□□□□□ -0.18
TARDBP-221ENST00000619555 CCL15-CCL14A0A0B4J2E2 113 aa13.91□□□□□ -0.18
TARDBP-221ENST00000619555 DIXDC1Q155Q3 683 aa13.91□□□□□ -0.18
TARDBP-221ENST00000619555 CCL15Q16663 113 aa13.91□□□□□ -0.18
TARDBP-221ENST00000619555 FKBP1CQ5VVH2 108 aa13.91□□□□□ -0.18
TARDBP-221ENST00000619555 ZKSCAN4Q969J2 545 aaPredicted RBP13.91□□□□□ -0.18
TARDBP-221ENST00000619555 ERO1AQ96HE7 468 aa13.91□□□□□ -0.18
TARDBP-221ENST00000619555 MEIS3Q99687 375 aa13.91□□□□□ -0.18
TARDBP-221ENST00000619555 FBXO3Q9UK99 471 aa13.91□□□□□ -0.18
TARDBP-221ENST00000619555 SNCAIPQ9Y6H5 919 aa13.91□□□□□ -0.18
TARDBP-221ENST00000619555 HTTP42858 3142 aa13.9□□□□□ -0.18
TARDBP-221ENST00000619555 SPDYE5A6NIY4 337 aa13.9□□□□□ -0.18
TARDBP-221ENST00000619555 PHKA1P46020 1223 aa13.9□□□□□ -0.18
TARDBP-221ENST00000619555 GTF2A2P52657 109 aa13.9□□□□□ -0.18
TARDBP-221ENST00000619555 RARSP54136 660 aaKnown RBP13.9□□□□□ -0.18
TARDBP-221ENST00000619555 SP3Q02447 781 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms