RNA–Protein interactions for RNA: ENST00000619396.4

KHSRP-213, Transcript of KH-type splicing regulatory protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KHSRP, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-213ENST00000619396 ITPK1Q13572 414 aa35.08■■■■□ 3.21
KHSRP-213ENST00000619396 RTEL1Q9NZ71 1219 aa35.08■■■■□ 3.21
KHSRP-213ENST00000619396 FSIP1Q8NA03 581 aa35.07■■■■□ 3.2
KHSRP-213ENST00000619396 CACTINQ8WUQ7 758 aaKnown RBP35.07■■■■□ 3.2
KHSRP-213ENST00000619396 GOLGA6L19H0YKK7 550 aa35.06■■■■□ 3.2
KHSRP-213ENST00000619396 KINO60870 393 aaKnown RBP35.06■■■■□ 3.2
KHSRP-213ENST00000619396 FGAP02671 866 aa35.06■■■■□ 3.2
KHSRP-213ENST00000619396 CCDC87Q9NVE4 849 aa35.06■■■■□ 3.2
KHSRP-213ENST00000619396 ME1P48163 572 aa35.06■■■■□ 3.2
KHSRP-213ENST00000619396 HAND2P61296 217 aa35.06■■■■□ 3.2
KHSRP-213ENST00000619396 IMMTQ16891 758 aaKnown RBP35.06■■■■□ 3.2
KHSRP-213ENST00000619396 MRFAP1L1Q96HT8 127 aa35.06■■■■□ 3.2
KHSRP-213ENST00000619396 PCDHA7Q9UN72 937 aa35.06■■■■□ 3.2
KHSRP-213ENST00000619396 MYO5AQ9Y4I1 1855 aaKnown RBP35.05■■■■□ 3.2
KHSRP-213ENST00000619396 MB21D2Q8IYB1 491 aaPredicted RBP35.05■■■■□ 3.2
KHSRP-213ENST00000619396 BCL2L12Q9HB09 334 aa35.05■■■■□ 3.2
KHSRP-213ENST00000619396 LTBP4Q8N2S1 1624 aa35.05■■■■□ 3.2
KHSRP-213ENST00000619396 CDCA7Q9BWT1 371 aaPredicted RBP35.05■■■■□ 3.2
KHSRP-213ENST00000619396 LOC102724428A0A0B4J2F2 783 aa35.04■■■■□ 3.2
KHSRP-213ENST00000619396 SIK1P57059 783 aa35.04■■■■□ 3.2
KHSRP-213ENST00000619396 DHX40Q8IX18 779 aaKnown RBP35.04■■■■□ 3.2
KHSRP-213ENST00000619396 FMR1NBQ8N0W7 255 aaPredicted RBP35.04■■■■□ 3.2
KHSRP-213ENST00000619396 MYH14Q7Z406 1995 aaKnown RBP35.04■■■■□ 3.2
KHSRP-213ENST00000619396 SNAP23O00161 211 aa35.04■■■■□ 3.2
KHSRP-213ENST00000619396 PDE8BO95263 885 aa35.04■■■■□ 3.2
KHSRP-213ENST00000619396 APPBP2Q92624 585 aa35.04■■■■□ 3.2
KHSRP-213ENST00000619396 HPS5Q9UPZ3 1129 aa35.04■■■■□ 3.2
KHSRP-213ENST00000619396 MYH7P12883 1935 aa35.03■■■■□ 3.2
KHSRP-213ENST00000619396 ANO10Q9NW15 660 aa35.03■■■■□ 3.2
KHSRP-213ENST00000619396 THRAP3Q9Y2W1 955 aaKnown RBP35.03■■■■□ 3.2
KHSRP-213ENST00000619396 ADALQ6DHV7 355 aa35.02■■■■□ 3.2
KHSRP-213ENST00000619396 ABCC12Q96J65 1359 aa35.02■■■■□ 3.2
KHSRP-213ENST00000619396 KCNQ2O43526 872 aa35.02■■■■□ 3.2
KHSRP-213ENST00000619396 PRC1O43663 620 aa35.02■■■■□ 3.2
KHSRP-213ENST00000619396 PHKA1P46020 1223 aa35.02■■■■□ 3.2
KHSRP-213ENST00000619396 PIP4K2BP78356 416 aa35.02■■■■□ 3.2
KHSRP-213ENST00000619396 SPATA31A5Q5VU36 1347 aa35.01■■■■□ 3.2
KHSRP-213ENST00000619396 SPATA31A7Q8IWB4 1347 aa35.01■■■■□ 3.2
KHSRP-213ENST00000619396 A0A1W2PQ27 194 aa35.01■■■■□ 3.2
KHSRP-213ENST00000619396 A0A1W2PQ64 194 aa35.01■■■■□ 3.2
KHSRP-213ENST00000619396 A0A1W2PQD8 194 aa35.01■■■■□ 3.2
KHSRP-213ENST00000619396 ANTXR2P58335 489 aa35.01■■■■□ 3.2
KHSRP-213ENST00000619396 LINC00301Q8NCQ3 95 aa35.01■■■■□ 3.2
KHSRP-213ENST00000619396 MRPS27Q92552 414 aaKnown RBP35.01■■■■□ 3.2
KHSRP-213ENST00000619396 ZMYND15Q9H091 742 aa35.01■■■■□ 3.2
KHSRP-213ENST00000619396 CTIFO43310 598 aaKnown RBP35.01■■■■□ 3.19
KHSRP-213ENST00000619396 OTUD7BQ6GQQ9 843 aa35.01■■■■□ 3.19
KHSRP-213ENST00000619396 CCDC94Q9BW85 323 aaPredicted RBP35.01■■■■□ 3.19
KHSRP-213ENST00000619396 PIH1D3Q9NQM4 214 aaKnown RBP35.01■■■■□ 3.19
KHSRP-213ENST00000619396 SEC31BQ9NQW1 1179 aa35.01■■■■□ 3.19
KHSRP-213ENST00000619396 A0A087WWV3 80 aa35■■■■□ 3.19
KHSRP-213ENST00000619396 KLF18A0A0U1RQI7 1052 aa34.99■■■■□ 3.19
KHSRP-213ENST00000619396 FBXO18Q8NFZ0 1043 aa34.99■■■■□ 3.19
KHSRP-213ENST00000619396 C8orf76Q96K31 380 aa34.99■■■■□ 3.19
KHSRP-213ENST00000619396 DDX60Q8IY21 1712 aaKnown RBP34.99■■■■□ 3.19
KHSRP-213ENST00000619396 CAMTA2O94983 1202 aa34.98■■■■□ 3.19
KHSRP-213ENST00000619396 CCDC102BQ68D86 513 aa34.98■■■■□ 3.19
KHSRP-213ENST00000619396 LRRC8AQ8IWT6 810 aa34.98■■■■□ 3.19
KHSRP-213ENST00000619396 CLIC4Q9Y696 253 aa34.98■■■■□ 3.19
KHSRP-213ENST00000619396 GPAA1O43292 621 aa34.98■■■■□ 3.19
KHSRP-213ENST00000619396 DHX16O60231 1041 aaKnown RBP34.98■■■■□ 3.19
KHSRP-213ENST00000619396 NCOA7Q8NI08 942 aa34.98■■■■□ 3.19
KHSRP-213ENST00000619396 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP34.97■■■■□ 3.19
KHSRP-213ENST00000619396 BECN2A8MW95 431 aa34.97■■■■□ 3.19
KHSRP-213ENST00000619396 POLR3EQ9NVU0 708 aa34.97■■■■□ 3.19
KHSRP-213ENST00000619396 WDR19Q8NEZ3 1342 aa34.96■■■■□ 3.19
KHSRP-213ENST00000619396 GOLGA8BA8MQT2 603 aa34.96■■■■□ 3.19
KHSRP-213ENST00000619396 ORC3Q9UBD5 711 aaPredicted RBP34.96■■■■□ 3.19
KHSRP-213ENST00000619396 A0A1B0GVL5 298 aa34.96■■■■□ 3.19
KHSRP-213ENST00000619396 YEATS4O95619 227 aa34.96■■■■□ 3.19
KHSRP-213ENST00000619396 SLC9C2Q5TAH2 1124 aa34.96■■■■□ 3.19
KHSRP-213ENST00000619396 C16orf45Q96MC5 204 aaPredicted RBP34.96■■■■□ 3.19
KHSRP-213ENST00000619396 NDUFA8P51970 172 aa34.95■■■■□ 3.19
KHSRP-213ENST00000619396 CEP57L1Q8IYX8 460 aa34.95■■■■□ 3.19
KHSRP-213ENST00000619396 ERCC4Q92889 916 aaPredicted RBP34.95■■■■□ 3.19
KHSRP-213ENST00000619396 UTP14AQ9BVJ6 771 aaKnown RBP34.95■■■■□ 3.19
KHSRP-213ENST00000619396 IDH1O75874 414 aaKnown RBP34.94■■■■□ 3.18
KHSRP-213ENST00000619396 ADD2P35612 726 aa34.94■■■■□ 3.18
KHSRP-213ENST00000619396 RBM6P78332 1123 aaKnown RBP34.94■■■■□ 3.18
KHSRP-213ENST00000619396 KCNG4Q8TDN1 519 aa34.94■■■■□ 3.18
KHSRP-213ENST00000619396 ARID3AQ99856 593 aa34.94■■■■□ 3.18
KHSRP-213ENST00000619396 ZNF213O14771 459 aa34.94■■■■□ 3.18
KHSRP-213ENST00000619396 POLR3DP05423 398 aaPredicted RBP34.94■■■■□ 3.18
KHSRP-213ENST00000619396 BRAPQ7Z569 592 aa34.94■■■■□ 3.18
KHSRP-213ENST00000619396 ANKRD7Q92527 254 aa34.94■■■■□ 3.18
KHSRP-213ENST00000619396 NEMFO60524 1076 aa34.93■■■■□ 3.18
KHSRP-213ENST00000619396 KCNQ4P56696 695 aa34.93■■■■□ 3.18
KHSRP-213ENST00000619396 ARID5BQ14865 1188 aa34.93■■■■□ 3.18
KHSRP-213ENST00000619396 STK38Q15208 465 aa34.93■■■■□ 3.18
KHSRP-213ENST00000619396 MYSM1Q5VVJ2 828 aa34.93■■■■□ 3.18
KHSRP-213ENST00000619396 TNNT1P13805 278 aa34.93■■■■□ 3.18
KHSRP-213ENST00000619396 FGFR2P21802 821 aa34.93■■■■□ 3.18
KHSRP-213ENST00000619396 PUM3Q15397 648 aaKnown RBP34.93■■■■□ 3.18
KHSRP-213ENST00000619396 ZNF512BQ96KM6 892 aaPredicted RBP34.93■■■■□ 3.18
KHSRP-213ENST00000619396 NEDD4P46934 1319 aa34.93■■■■□ 3.18
KHSRP-213ENST00000619396 LRP5O75197 1615 aa34.93■■■■□ 3.18
KHSRP-213ENST00000619396 SDF4Q9BRK5 362 aa34.92■■■■□ 3.18
KHSRP-213ENST00000619396 DDX24Q9GZR7 859 aaKnown RBP eCLIP34.92■■■■□ 3.181e-7■■■□□ 18.7
KHSRP-213ENST00000619396 NBPF3Q9H094 633 aa34.92■■■■□ 3.18
KHSRP-213ENST00000619396 WWC3Q9ULE0 1092 aa34.92■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms