RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 PROCA1Q8NCQ7 364 aaPredicted RBP8.16□□□□□ -1.1
SRGAP3-213ENST00000618999 FSD1Q9BTV5 496 aa8.16□□□□□ -1.1
SRGAP3-213ENST00000618999 UBR2Q8IWV8 1755 aa8.16□□□□□ -1.1
SRGAP3-213ENST00000618999 U2AF2P26368 475 aaKnown RBP eCLIP8.16□□□□□ -1.1
SRGAP3-213ENST00000618999 GTF2F1P35269 517 aaKnown RBP eCLIP8.16□□□□□ -1.1
SRGAP3-213ENST00000618999 ZNF165P49910 485 aa8.16□□□□□ -1.1
SRGAP3-213ENST00000618999 TPM4P67936 248 aa8.16□□□□□ -1.1
SRGAP3-213ENST00000618999 ANO6Q4KMQ2 910 aa8.16□□□□□ -1.1
SRGAP3-213ENST00000618999 TAF3Q5VWG9 929 aa8.16□□□□□ -1.1
SRGAP3-213ENST00000618999 RUFY3Q7L099 469 aa8.16□□□□□ -1.1
SRGAP3-213ENST00000618999 LUZP1Q86V48 1076 aa8.16□□□□□ -1.1
SRGAP3-213ENST00000618999 PI4K2BQ8TCG2 481 aa8.16□□□□□ -1.1
SRGAP3-213ENST00000618999 DACT1Q9NYF0 836 aa8.16□□□□□ -1.1
SRGAP3-213ENST00000618999 PYCARDQ9ULZ3 195 aa8.16□□□□□ -1.1
SRGAP3-213ENST00000618999 SALL3Q9BXA9 1300 aa8.16□□□□□ -1.1
SRGAP3-213ENST00000618999 LAMB4A4D0S4 1761 aa8.16□□□□□ -1.1
SRGAP3-213ENST00000618999 SMTNL1A8MU46 457 aa8.16□□□□□ -1.1
SRGAP3-213ENST00000618999 STK3Q13188 491 aa8.16□□□□□ -1.1
SRGAP3-213ENST00000618999 NARFQ9UHQ1 456 aa8.16□□□□□ -1.1
SRGAP3-213ENST00000618999 CDHR2Q9BYE9 1310 aa8.16□□□□□ -1.1
SRGAP3-213ENST00000618999 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.15□□□□□ -1.1
SRGAP3-213ENST00000618999 CCDC152Q4G0S7 254 aa8.15□□□□□ -1.1
SRGAP3-213ENST00000618999 HELBQ8NG08 1087 aaPredicted RBP8.15□□□□□ -1.1
SRGAP3-213ENST00000618999 UPF1Q92900 1129 aaKnown RBP eCLIP8.15□□□□□ -1.1
SRGAP3-213ENST00000618999 TRAIPQ9BWF2 469 aa8.15□□□□□ -1.1
SRGAP3-213ENST00000618999 PLA2G12BQ9BX93 195 aa8.15□□□□□ -1.1
SRGAP3-213ENST00000618999 TFIP11Q9UBB9 837 aaKnown RBP8.15□□□□□ -1.1
SRGAP3-213ENST00000618999 DBNLQ9UJU6 430 aaKnown RBP8.15□□□□□ -1.1
SRGAP3-213ENST00000618999 PRDM4Q9UKN5 801 aa8.15□□□□□ -1.1
SRGAP3-213ENST00000618999 AKAP2Q9Y2D5 859 aa8.15□□□□□ -1.1
SRGAP3-213ENST00000618999 A0A1B0GUL7 405 aa8.15□□□□□ -1.1
SRGAP3-213ENST00000618999 CCDC66A2RUB6 948 aa8.15□□□□□ -1.1
SRGAP3-213ENST00000618999 CSF1RP07333 972 aa8.15□□□□□ -1.1
SRGAP3-213ENST00000618999 IGHMBP2P38935 993 aaKnown RBP8.15□□□□□ -1.1
SRGAP3-213ENST00000618999 TBC1D9BQ66K14 1250 aa8.15□□□□□ -1.1
SRGAP3-213ENST00000618999 LRRC4BQ9NT99 713 aa8.15□□□□□ -1.1
SRGAP3-213ENST00000618999 PAPPAQ13219 1627 aa8.15□□□□□ -1.11
SRGAP3-213ENST00000618999 PTPN14Q15678 1187 aa8.15□□□□□ -1.11
SRGAP3-213ENST00000618999 CCDC158Q5M9N0 1113 aa8.15□□□□□ -1.11
SRGAP3-213ENST00000618999 TPTE2Q6XPS3 522 aa8.15□□□□□ -1.11
SRGAP3-213ENST00000618999 ATG9AQ7Z3C6 839 aa8.15□□□□□ -1.11
SRGAP3-213ENST00000618999 EVI5LQ96CN4 794 aa8.15□□□□□ -1.11
SRGAP3-213ENST00000618999 OGFRQ9NZT2 677 aa8.15□□□□□ -1.11
SRGAP3-213ENST00000618999 MTMR6Q9Y217 621 aa8.15□□□□□ -1.11
SRGAP3-213ENST00000618999 NDUFB9Q9Y6M9 179 aa8.15□□□□□ -1.11
SRGAP3-213ENST00000618999 KINO60870 393 aaKnown RBP8.14□□□□□ -1.11
SRGAP3-213ENST00000618999 CAVIN2O95810 425 aa8.14□□□□□ -1.11
SRGAP3-213ENST00000618999 TXNRD1Q16881 649 aa8.14□□□□□ -1.11
SRGAP3-213ENST00000618999 ERFEQ4G0M1 354 aa8.14□□□□□ -1.11
SRGAP3-213ENST00000618999 SEC31BQ9NQW1 1179 aa8.14□□□□□ -1.11
SRGAP3-213ENST00000618999 TFCP2L1Q9NZI6 479 aa8.14□□□□□ -1.11
SRGAP3-213ENST00000618999 CFAP45Q9UL16 551 aa8.14□□□□□ -1.11
SRGAP3-213ENST00000618999 NEMFO60524 1076 aa8.14□□□□□ -1.11
SRGAP3-213ENST00000618999 FILIP1Q7Z7B0 1213 aa8.14□□□□□ -1.11
SRGAP3-213ENST00000618999 NAT10Q9H0A0 1025 aaKnown RBP8.14□□□□□ -1.11
SRGAP3-213ENST00000618999 CIAO1O76071 339 aa8.14□□□□□ -1.11
SRGAP3-213ENST00000618999 IFIT1P09914 478 aaKnown RBP8.14□□□□□ -1.11
SRGAP3-213ENST00000618999 FKBP4Q02790 459 aaKnown RBP eCLIP8.14□□□□□ -1.11
SRGAP3-213ENST00000618999 CEBPZQ03701 1054 aaKnown RBP8.14□□□□□ -1.11
SRGAP3-213ENST00000618999 ATP2B3Q16720 1220 aa8.14□□□□□ -1.11
SRGAP3-213ENST00000618999 TTC39AQ5SRH9 613 aa8.14□□□□□ -1.11
SRGAP3-213ENST00000618999 CEP135Q66GS9 1140 aa8.14□□□□□ -1.11
SRGAP3-213ENST00000618999 EDC3Q96F86 508 aaKnown RBP8.14□□□□□ -1.11
SRGAP3-213ENST00000618999 NLRP3Q96P20 1036 aa8.14□□□□□ -1.11
SRGAP3-213ENST00000618999 NYXQ9GZU5 481 aa8.14□□□□□ -1.11
SRGAP3-213ENST00000618999 LSG1Q9H089 658 aaKnown RBP8.14□□□□□ -1.11
SRGAP3-213ENST00000618999 RBM8AQ9Y5S9 174 aaKnown RBP8.14□□□□□ -1.11
SRGAP3-213ENST00000618999 ARFGEF2Q9Y6D5 1785 aa8.13□□□□□ -1.11
SRGAP3-213ENST00000618999 NTSR2O95665 410 aa8.13□□□□□ -1.11
SRGAP3-213ENST00000618999 SF3A1Q15459 793 aaKnown RBP8.13□□□□□ -1.11
SRGAP3-213ENST00000618999 SNRKQ9NRH2 765 aa8.13□□□□□ -1.11
SRGAP3-213ENST00000618999 WNK3Q9BYP7 1800 aa8.13□□□□□ -1.11
SRGAP3-213ENST00000618999 RPAP1Q9BWH6 1393 aaPredicted RBP8.13□□□□□ -1.11
SRGAP3-213ENST00000618999 DTNBO60941 627 aa8.13□□□□□ -1.11
SRGAP3-213ENST00000618999 SLC27A3Q5K4L6 730 aa8.13□□□□□ -1.11
SRGAP3-213ENST00000618999 DDX46Q7L014 1031 aaKnown RBP8.13□□□□□ -1.11
SRGAP3-213ENST00000618999 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.13□□□□□ -1.11
SRGAP3-213ENST00000618999 ZNF710Q8N1W2 664 aa8.13□□□□□ -1.11
SRGAP3-213ENST00000618999 CBX8Q9HC52 389 aa8.13□□□□□ -1.11
SRGAP3-213ENST00000618999 CCDC171Q6TFL3 1326 aa8.13□□□□□ -1.11
SRGAP3-213ENST00000618999 FOSBP53539 338 aa8.13□□□□□ -1.11
SRGAP3-213ENST00000618999 AMIGO3Q86WK7 504 aa8.13□□□□□ -1.11
SRGAP3-213ENST00000618999 CDC5LQ99459 802 aaKnown RBP8.13□□□□□ -1.11
SRGAP3-213ENST00000618999 TM6SF1Q9BZW5 370 aa8.13□□□□□ -1.11
SRGAP3-213ENST00000618999 DNAJC25Q9H1X3 360 aa8.13□□□□□ -1.11
SRGAP3-213ENST00000618999 AFDNP55196 1824 aaKnown RBP8.12□□□□□ -1.11
SRGAP3-213ENST00000618999 GOLIM4O00461 696 aa8.12□□□□□ -1.11
SRGAP3-213ENST00000618999 ATP5JP18859 108 aa8.12□□□□□ -1.11
SRGAP3-213ENST00000618999 ZNF75DP51815 510 aa8.12□□□□□ -1.11
SRGAP3-213ENST00000618999 MDM2Q00987 491 aaPredicted RBP8.12□□□□□ -1.11
SRGAP3-213ENST00000618999 KRT32Q14532 448 aa8.12□□□□□ -1.11
SRGAP3-213ENST00000618999 KIF18AQ8NI77 898 aa8.12□□□□□ -1.11
SRGAP3-213ENST00000618999 XAGE2Q96GT9 111 aa8.12□□□□□ -1.11
SRGAP3-213ENST00000618999 SSUH2Q9Y2M2 353 aa8.12□□□□□ -1.11
SRGAP3-213ENST00000618999 TAF5LO75529 589 aa8.12□□□□□ -1.11
SRGAP3-213ENST00000618999 ZSCAN20P17040 1043 aaPredicted RBP8.12□□□□□ -1.11
SRGAP3-213ENST00000618999 CREB3L3Q68CJ9 461 aa8.12□□□□□ -1.11
SRGAP3-213ENST00000618999 FAM173BQ6P4H8 233 aa8.12□□□□□ -1.11
SRGAP3-213ENST00000618999 HOMER1Q86YM7 354 aa8.12□□□□□ -1.11
SRGAP3-213ENST00000618999 CEP57L1Q8IYX8 460 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms