RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 SALL1Q9NSC2 1324 aa30.72■■■□□ 2.51
PMS1-220ENST00000618056 THSD7BQ9C0I4 1608 aa30.72■■■□□ 2.51
PMS1-220ENST00000618056 PAPPA2Q9BXP8 1791 aa30.72■■■□□ 2.51
PMS1-220ENST00000618056 RPAP2Q8IXW5 612 aaPredicted RBP30.71■■■□□ 2.51
PMS1-220ENST00000618056 WDR33Q9C0J8 1336 aaKnown RBP30.71■■■□□ 2.51
PMS1-220ENST00000618056 ECE1P42892 770 aa30.7■■■□□ 2.51
PMS1-220ENST00000618056 TEKT1Q969V4 418 aa30.7■■■□□ 2.5
PMS1-220ENST00000618056 CAPNS2Q96L46 248 aa30.7■■■□□ 2.5
PMS1-220ENST00000618056 AOX1Q06278 1338 aa30.69■■■□□ 2.5
PMS1-220ENST00000618056 HUNKP57058 714 aa30.69■■■□□ 2.5
PMS1-220ENST00000618056 FKBP1BP68106 108 aa30.69■■■□□ 2.5
PMS1-220ENST00000618056 RASGRF1Q13972 1273 aa30.69■■■□□ 2.5
PMS1-220ENST00000618056 SPDYE2Q495Y8 402 aa30.68■■■□□ 2.5
PMS1-220ENST00000618056 TNNI3KQ59H18 835 aa30.68■■■□□ 2.5
PMS1-220ENST00000618056 CYP4F22Q6NT55 531 aa30.68■■■□□ 2.5
PMS1-220ENST00000618056 PPP2R3BQ9Y5P8 575 aa30.68■■■□□ 2.5
PMS1-220ENST00000618056 FPGT-TNNI3KV9GXZ4 949 aa30.68■■■□□ 2.5
PMS1-220ENST00000618056 CLRN2A0PK11 232 aa30.67■■■□□ 2.5
PMS1-220ENST00000618056 HHIPL2Q6UWX4 724 aa30.67■■■□□ 2.5
PMS1-220ENST00000618056 DEFB129Q9H1M3 183 aa30.67■■■□□ 2.5
PMS1-220ENST00000618056 MYH2Q9UKX2 1941 aa30.66■■■□□ 2.5
PMS1-220ENST00000618056 GORABQ5T7V8 394 aa30.66■■■□□ 2.5
PMS1-220ENST00000618056 PRAMEF18Q5VWM3 479 aa30.66■■■□□ 2.5
PMS1-220ENST00000618056 PAXIP1Q6ZW49 1069 aaPredicted RBP30.66■■■□□ 2.5
PMS1-220ENST00000618056 ZDHHC15Q96MV8 337 aa30.66■■■□□ 2.5
PMS1-220ENST00000618056 AKAP11Q9UKA4 1901 aa30.65■■■□□ 2.5
PMS1-220ENST00000618056 HMMRO75330 724 aa30.65■■■□□ 2.5
PMS1-220ENST00000618056 ARID4AP29374 1257 aaPredicted RBP30.65■■■□□ 2.5
PMS1-220ENST00000618056 ZGPATQ8N5A5 531 aaKnown RBP30.65■■■□□ 2.5
PMS1-220ENST00000618056 TDRD3Q9H7E2 651 aaKnown RBP30.65■■■□□ 2.5
PMS1-220ENST00000618056 ZNF70Q9UC06 446 aaPredicted RBP30.65■■■□□ 2.5
PMS1-220ENST00000618056 PRDX5P30044 214 aa30.64■■■□□ 2.5
PMS1-220ENST00000618056 NF2P35240 595 aa30.64■■■□□ 2.5
PMS1-220ENST00000618056 ERC1Q8IUD2 1116 aa30.64■■■□□ 2.5
PMS1-220ENST00000618056 SIRT2Q8IXJ6 389 aa30.64■■■□□ 2.5
PMS1-220ENST00000618056 VEZTQ9HBM0 779 aa30.64■■■□□ 2.5
PMS1-220ENST00000618056 LDHBP07195 334 aaKnown RBP30.63■■■□□ 2.49
PMS1-220ENST00000618056 TNFAIP1Q13829 316 aa30.63■■■□□ 2.49
PMS1-220ENST00000618056 HSP90AB4PQ58FF6 505 aa30.63■■■□□ 2.49
PMS1-220ENST00000618056 EXOC6BQ9Y2D4 811 aa30.63■■■□□ 2.49
PMS1-220ENST00000618056 UQCRFS1P1P0C7P4 283 aa30.61■■■□□ 2.49
PMS1-220ENST00000618056 RRP1P56182 461 aaKnown RBP30.61■■■□□ 2.49
PMS1-220ENST00000618056 APOBEC3HQ6NTF7 200 aaKnown RBP30.61■■■□□ 2.49
PMS1-220ENST00000618056 RGMBQ6NW40 437 aa30.61■■■□□ 2.49
PMS1-220ENST00000618056 DBNDD2Q9BQY9 259 aa30.61■■■□□ 2.49
PMS1-220ENST00000618056 HMG20BQ9P0W2 317 aa30.61■■■□□ 2.49
PMS1-220ENST00000618056 HSPA1AP0DMV8 641 aaKnown RBP30.6■■■□□ 2.49
PMS1-220ENST00000618056 HSPA1BP0DMV9 641 aaKnown RBP30.6■■■□□ 2.49
PMS1-220ENST00000618056 MAP2K2P36507 400 aa30.6■■■□□ 2.49
PMS1-220ENST00000618056 GRM1Q13255 1194 aa30.59■■■□□ 2.49
PMS1-220ENST00000618056 RASA3Q14644 834 aa30.59■■■□□ 2.49
PMS1-220ENST00000618056 SPATA5Q8NB90 893 aa30.59■■■□□ 2.49
PMS1-220ENST00000618056 CCDC158Q5M9N0 1113 aa30.58■■■□□ 2.49
PMS1-220ENST00000618056 SPTY2D1Q68D10 685 aaPredicted RBP30.58■■■□□ 2.49
PMS1-220ENST00000618056 EAF2Q96CJ1 260 aaPredicted RBP30.58■■■□□ 2.49
PMS1-220ENST00000618056 DBNLQ9UJU6 430 aaKnown RBP30.58■■■□□ 2.49
PMS1-220ENST00000618056 MCAMP43121 646 aa30.57■■■□□ 2.48
PMS1-220ENST00000618056 DIXDC1Q155Q3 683 aa30.57■■■□□ 2.48
PMS1-220ENST00000618056 CCDC102AQ96A19 550 aa30.57■■■□□ 2.48
PMS1-220ENST00000618056 ZNF512BQ96KM6 892 aaPredicted RBP30.57■■■□□ 2.48
PMS1-220ENST00000618056 ABCF2Q9UG63 623 aa30.57■■■□□ 2.48
PMS1-220ENST00000618056 DAGLAQ9Y4D2 1042 aa30.57■■■□□ 2.48
PMS1-220ENST00000618056 SSC5DA1L4H1 1573 aa30.57■■■□□ 2.48
PMS1-220ENST00000618056 MAP2K1Q02750 393 aaPredicted RBP30.57■■■□□ 2.48
PMS1-220ENST00000618056 NOGQ13253 232 aa30.57■■■□□ 2.48
PMS1-220ENST00000618056 SUPT20HL1Q3ZLR7 823 aa30.57■■■□□ 2.48
PMS1-220ENST00000618056 FKBP1CQ5VVH2 108 aa30.57■■■□□ 2.48
PMS1-220ENST00000618056 WBP1LQ9NX94 342 aa30.57■■■□□ 2.48
PMS1-220ENST00000618056 FAM155AB1AL88 458 aaPredicted RBP30.56■■■□□ 2.48
PMS1-220ENST00000618056 TNNI2P48788 182 aa30.56■■■□□ 2.48
PMS1-220ENST00000618056 ZNF157P51786 506 aaPredicted RBP30.56■■■□□ 2.48
PMS1-220ENST00000618056 PI16Q6UXB8 463 aa30.56■■■□□ 2.48
PMS1-220ENST00000618056 MOB2Q70IA6 237 aa30.56■■■□□ 2.48
PMS1-220ENST00000618056 RHPN1Q8TCX5 695 aa30.56■■■□□ 2.48
PMS1-220ENST00000618056 TMOD2Q9NZR1 351 aa30.56■■■□□ 2.48
PMS1-220ENST00000618056 AOC2O75106 756 aa30.55■■■□□ 2.48
PMS1-220ENST00000618056 TTLL12Q14166 644 aaPredicted RBP30.55■■■□□ 2.48
PMS1-220ENST00000618056 TTC39AQ5SRH9 613 aa30.55■■■□□ 2.48
PMS1-220ENST00000618056 ARMC9Q7Z3E5 817 aa30.55■■■□□ 2.48
PMS1-220ENST00000618056 MYO5AQ9Y4I1 1855 aaKnown RBP30.54■■■□□ 2.48
PMS1-220ENST00000618056 TCP10L2B9ZVM9 353 aa30.54■■■□□ 2.48
PMS1-220ENST00000618056 DZIP1Q86YF9 867 aaKnown RBP30.54■■■□□ 2.48
PMS1-220ENST00000618056 KIF1BPQ96EK5 621 aa30.54■■■□□ 2.48
PMS1-220ENST00000618056 CCDC8Q9H0W5 538 aaPredicted RBP30.54■■■□□ 2.48
PMS1-220ENST00000618056 TLR7Q9NYK1 1049 aaKnown RBP30.54■■■□□ 2.48
PMS1-220ENST00000618056 GAKO14976 1311 aa30.53■■■□□ 2.48
PMS1-220ENST00000618056 UBE2Q2LH0YL09 131 aa30.53■■■□□ 2.48
PMS1-220ENST00000618056 SLC10A3P09131 477 aa30.53■■■□□ 2.48
PMS1-220ENST00000618056 MAP3K11Q16584 847 aa30.53■■■□□ 2.48
PMS1-220ENST00000618056 NBPF12Q5TAG4 269 aaPredicted RBP30.53■■■□□ 2.48
PMS1-220ENST00000618056 ERICH6Q7L0X2 663 aa30.53■■■□□ 2.48
PMS1-220ENST00000618056 FAM83AQ86UY5 434 aa30.53■■■□□ 2.48
PMS1-220ENST00000618056 SLF2Q8IX21 1173 aa30.53■■■□□ 2.48
PMS1-220ENST00000618056 FAM163AQ96GL9 167 aaPredicted RBP30.53■■■□□ 2.48
PMS1-220ENST00000618056 TEPSINQ96N21 525 aa30.53■■■□□ 2.48
PMS1-220ENST00000618056 RAB11FIP3O75154 756 aa30.52■■■□□ 2.48
PMS1-220ENST00000618056 PPP1R12BO60237 982 aaPredicted RBP30.51■■■□□ 2.48
PMS1-220ENST00000618056 CACNB3P54284 484 aa30.51■■■□□ 2.48
PMS1-220ENST00000618056 AK9Q5TCS8 1911 aa30.51■■■□□ 2.47
PMS1-220ENST00000618056 LDLRAD1Q5T700 205 aa30.5■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms