RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 DDRGK1Q96HY6 314 aa14.09□□□□□ -0.15
PDPN-211ENST00000617617 LRP2BPQ9P2M1 347 aa14.09□□□□□ -0.15
PDPN-211ENST00000617617 COL4A5P29400 1685 aa14.09□□□□□ -0.15
PDPN-211ENST00000617617 C21orf2O43822 256 aa14.08□□□□□ -0.16
PDPN-211ENST00000617617 MAGEB6Q8N7X4 407 aa14.08□□□□□ -0.16
PDPN-211ENST00000617617 ZNF384Q8TF68 577 aa14.08□□□□□ -0.16
PDPN-211ENST00000617617 PUS7LQ9H0K6 701 aaKnown RBP14.08□□□□□ -0.16
PDPN-211ENST00000617617 ANP32AP39687 249 aaKnown RBP14.08□□□□□ -0.16
PDPN-211ENST00000617617 RABEP1Q15276 862 aa14.08□□□□□ -0.16
PDPN-211ENST00000617617 SNX21Q969T3 373 aa14.08□□□□□ -0.16
PDPN-211ENST00000617617 GPR101Q96P66 508 aaPredicted RBP14.08□□□□□ -0.16
PDPN-211ENST00000617617 FOXP2O15409 715 aa14.07□□□□□ -0.16
PDPN-211ENST00000617617 STRIP1Q5VSL9 837 aa14.07□□□□□ -0.16
PDPN-211ENST00000617617 STRBPQ96SI9 672 aaKnown RBP14.07□□□□□ -0.16
PDPN-211ENST00000617617 TM6SF1Q9BZW5 370 aa14.07□□□□□ -0.16
PDPN-211ENST00000617617 HSPD1P10809 573 aaKnown RBP14.07□□□□□ -0.16
PDPN-211ENST00000617617 SEC62Q99442 399 aaKnown RBP14.07□□□□□ -0.16
PDPN-211ENST00000617617 GPAA1O43292 621 aa14.06□□□□□ -0.16
PDPN-211ENST00000617617 FRAT2O75474 233 aaPredicted RBP14.06□□□□□ -0.16
PDPN-211ENST00000617617 CHGBP05060 677 aa14.06□□□□□ -0.16
PDPN-211ENST00000617617 PPP4CP60510 307 aa14.06□□□□□ -0.16
PDPN-211ENST00000617617 MECOMQ03112 1051 aa14.06□□□□□ -0.16
PDPN-211ENST00000617617 GIMAP6Q6P9H5 292 aa14.06□□□□□ -0.16
PDPN-211ENST00000617617 RIOK1Q9BRS2 568 aaKnown RBP14.06□□□□□ -0.16
PDPN-211ENST00000617617 IQSEC3Q9UPP2 1182 aaPredicted RBP14.06□□□□□ -0.16
PDPN-211ENST00000617617 RBM8AQ9Y5S9 174 aaKnown RBP14.06□□□□□ -0.16
PDPN-211ENST00000617617 GAKO14976 1311 aa14.06□□□□□ -0.16
PDPN-211ENST00000617617 MYH1P12882 1939 aa14.06□□□□□ -0.16
PDPN-211ENST00000617617 BAZ2AQ9UIF9 1905 aaKnown RBP14.06□□□□□ -0.16
PDPN-211ENST00000617617 ADAMTSL1Q8N6G6 1762 aa14.06□□□□□ -0.16
PDPN-211ENST00000617617 LDHBP07195 334 aaKnown RBP14.06□□□□□ -0.16
PDPN-211ENST00000617617 MMP14P50281 582 aa14.06□□□□□ -0.16
PDPN-211ENST00000617617 NAA16Q6N069 864 aaPredicted RBP14.06□□□□□ -0.16
PDPN-211ENST00000617617 SLF2Q8IX21 1173 aa14.06□□□□□ -0.16
PDPN-211ENST00000617617 CTNNA3Q9UI47 895 aa14.06□□□□□ -0.16
PDPN-211ENST00000617617 HDLBPQ00341 1268 aaKnown RBP14.05□□□□□ -0.16
PDPN-211ENST00000617617 RNF20Q5VTR2 975 aa14.05□□□□□ -0.16
PDPN-211ENST00000617617 RAI14Q9P0K7 980 aa14.05□□□□□ -0.16
PDPN-211ENST00000617617 ECE2O60344 883 aa14.05□□□□□ -0.16
PDPN-211ENST00000617617 LDHCP07864 332 aa14.05□□□□□ -0.16
PDPN-211ENST00000617617 PATL2C9JE40 543 aaKnown RBP14.05□□□□□ -0.16
PDPN-211ENST00000617617 CYP7A1P22680 504 aa14.05□□□□□ -0.16
PDPN-211ENST00000617617 CREB3L3Q68CJ9 461 aa14.05□□□□□ -0.16
PDPN-211ENST00000617617 CCDC129Q6ZRS4 1044 aa14.05□□□□□ -0.16
PDPN-211ENST00000617617 ALDH8A1Q9H2A2 487 aaPredicted RBP14.05□□□□□ -0.16
PDPN-211ENST00000617617 ABCF2Q9UG63 623 aa14.05□□□□□ -0.16
PDPN-211ENST00000617617 SNX14Q9Y5W7 946 aa14.05□□□□□ -0.16
PDPN-211ENST00000617617 MYO3BQ8WXR4 1341 aa14.05□□□□□ -0.16
PDPN-211ENST00000617617 MROH7-TTC4A0A0A0MT08 1334 aa14.04□□□□□ -0.16
PDPN-211ENST00000617617 SLC27A2O14975 620 aa14.04□□□□□ -0.16
PDPN-211ENST00000617617 PRDX5P30044 214 aa14.04□□□□□ -0.16
PDPN-211ENST00000617617 SLFNL1Q499Z3 407 aa14.04□□□□□ -0.16
PDPN-211ENST00000617617 DACT2Q5SW24 774 aa14.04□□□□□ -0.16
PDPN-211ENST00000617617 ADGRA1Q86SQ6 560 aa14.04□□□□□ -0.16
PDPN-211ENST00000617617 RIMBP2O15034 1052 aa14.04□□□□□ -0.16
PDPN-211ENST00000617617 CHAF1AQ13111 956 aaPredicted RBP14.04□□□□□ -0.16
PDPN-211ENST00000617617 KRT32Q14532 448 aa14.04□□□□□ -0.16
PDPN-211ENST00000617617 AIDAQ96BJ3 306 aa14.04□□□□□ -0.16
PDPN-211ENST00000617617 MAGEB6P1A0A0J9YX57 407 aa14.03□□□□□ -0.16
PDPN-211ENST00000617617 IARSP41252 1262 aaKnown RBP14.03□□□□□ -0.16
PDPN-211ENST00000617617 MFSD14BQ5SR56 506 aa14.03□□□□□ -0.16
PDPN-211ENST00000617617 PALD1Q9ULE6 856 aa14.03□□□□□ -0.16
PDPN-211ENST00000617617 GPR75-ASB3A0A0A6YYF3 556 aa14.03□□□□□ -0.16
PDPN-211ENST00000617617 USP17L3A6NCW0 530 aa14.03□□□□□ -0.16
PDPN-211ENST00000617617 USP17L4A6NCW7 530 aa14.03□□□□□ -0.16
PDPN-211ENST00000617617 NT5C2P49902 561 aa14.03□□□□□ -0.16
PDPN-211ENST00000617617 AOC3Q16853 763 aa14.03□□□□□ -0.16
PDPN-211ENST00000617617 TTLL5Q6EMB2 1281 aa14.03□□□□□ -0.16
PDPN-211ENST00000617617 USP17L1Q7RTZ2 530 aa14.03□□□□□ -0.16
PDPN-211ENST00000617617 DZIP1Q86YF9 867 aaKnown RBP14.03□□□□□ -0.16
PDPN-211ENST00000617617 TAOK3Q9H2K8 898 aa14.03□□□□□ -0.16
PDPN-211ENST00000617617 PPIP5K2O43314 1243 aa14.02□□□□□ -0.16
PDPN-211ENST00000617617 ZKSCAN1P17029 563 aaPredicted RBP14.02□□□□□ -0.16
PDPN-211ENST00000617617 VPS53Q5VIR6 699 aa14.02□□□□□ -0.16
PDPN-211ENST00000617617 HHIPL2Q6UWX4 724 aa14.02□□□□□ -0.16
PDPN-211ENST00000617617 NFKBIEO00221 500 aa14.02□□□□□ -0.17
PDPN-211ENST00000617617 MBD4O95243 580 aa14.02□□□□□ -0.17
PDPN-211ENST00000617617 GTF2IP78347 998 aa14.02□□□□□ -0.17
PDPN-211ENST00000617617 CERS5Q8N5B7 392 aa14.02□□□□□ -0.17
PDPN-211ENST00000617617 NLGN2Q8NFZ4 835 aa14.02□□□□□ -0.17
PDPN-211ENST00000617617 IPO9Q96P70 1041 aaKnown RBP14.02□□□□□ -0.17
PDPN-211ENST00000617617 GSG1L2A8MUP6 293 aa14.01□□□□□ -0.17
PDPN-211ENST00000617617 VIL1P09327 827 aaKnown RBP14.01□□□□□ -0.17
PDPN-211ENST00000617617 LCORLQ8N3X6 602 aa14.01□□□□□ -0.17
PDPN-211ENST00000617617 ZSWIM6Q9HCJ5 1215 aa14.01□□□□□ -0.17
PDPN-211ENST00000617617 ANAPC4Q9UJX5 808 aa14.01□□□□□ -0.17
PDPN-211ENST00000617617 YDJCA8MPS7 323 aa14.01□□□□□ -0.17
PDPN-211ENST00000617617 PLCG2P16885 1265 aa14.01□□□□□ -0.17
PDPN-211ENST00000617617 DOK7Q18PE1 504 aa14.01□□□□□ -0.17
PDPN-211ENST00000617617 RASEFQ8IZ41 740 aa14.01□□□□□ -0.17
PDPN-211ENST00000617617 ZNRF3Q9ULT6 936 aa14.01□□□□□ -0.17
PDPN-211ENST00000617617 WDR19Q8NEZ3 1342 aa14.01□□□□□ -0.17
PDPN-211ENST00000617617 MYH8P13535 1937 aa14□□□□□ -0.17
PDPN-211ENST00000617617 G3V3G9 751 aa14□□□□□ -0.17
PDPN-211ENST00000617617 PSMA5P28066 241 aa14□□□□□ -0.17
PDPN-211ENST00000617617 MCM2P49736 904 aa14□□□□□ -0.17
PDPN-211ENST00000617617 GRIK5Q16478 980 aa14□□□□□ -0.17
PDPN-211ENST00000617617 DCAF8Q5TAQ9 597 aa14□□□□□ -0.17
PDPN-211ENST00000617617 FBXL16Q8N461 479 aa14□□□□□ -0.17
PDPN-211ENST00000617617 ATP8A2Q9NTI2 1148 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms