RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 CIAO1O76071 339 aa27.75■■■□□ 2.03
NEDD4L-237ENST00000617539 CDAN1Q8IWY9 1227 aa27.75■■■□□ 2.03
NEDD4L-237ENST00000617539 LPIN2Q92539 896 aa27.75■■■□□ 2.03
NEDD4L-237ENST00000617539 CLMNQ96JQ2 1002 aa27.75■■■□□ 2.03
NEDD4L-237ENST00000617539 PA2G4Q9UQ80 394 aaKnown RBP27.75■■■□□ 2.03
NEDD4L-237ENST00000617539 TM4SF4P48230 202 aa27.74■■■□□ 2.03
NEDD4L-237ENST00000617539 SPRYD7Q5W111 196 aa27.74■■■□□ 2.03
NEDD4L-237ENST00000617539 FBXO3Q9UK99 471 aa27.74■■■□□ 2.03
NEDD4L-237ENST00000617539 BCAR3O75815 825 aa27.73■■■□□ 2.03
NEDD4L-237ENST00000617539 SLC5A1P13866 664 aa27.73■■■□□ 2.03
NEDD4L-237ENST00000617539 TRIM27P14373 513 aa27.73■■■□□ 2.03
NEDD4L-237ENST00000617539 DGKZQ13574 1117 aa27.73■■■□□ 2.03
NEDD4L-237ENST00000617539 TEPSINQ96N21 525 aa27.73■■■□□ 2.03
NEDD4L-237ENST00000617539 PPP1R12BO60237 982 aaPredicted RBP27.72■■■□□ 2.03
NEDD4L-237ENST00000617539 HDLBPQ00341 1268 aaKnown RBP27.72■■■□□ 2.03
NEDD4L-237ENST00000617539 SUPT20HL1Q3ZLR7 823 aa27.72■■■□□ 2.03
NEDD4L-237ENST00000617539 USP2O75604 605 aaPredicted RBP27.71■■■□□ 2.03
NEDD4L-237ENST00000617539 TNFAIP1Q13829 316 aa27.71■■■□□ 2.03
NEDD4L-237ENST00000617539 ATP2B3Q16720 1220 aa27.71■■■□□ 2.03
NEDD4L-237ENST00000617539 COPRSQ9NQ92 184 aa27.71■■■□□ 2.03
NEDD4L-237ENST00000617539 TCP10L2B9ZVM9 353 aa27.7■■■□□ 2.02
NEDD4L-237ENST00000617539 TEKT1Q969V4 418 aa27.7■■■□□ 2.02
NEDD4L-237ENST00000617539 TBC1D8O95759 1140 aa27.69■■■□□ 2.02
NEDD4L-237ENST00000617539 IL15P40933 162 aaPredicted RBP27.69■■■□□ 2.02
NEDD4L-237ENST00000617539 DIEXFQ68CQ4 756 aaKnown RBP27.69■■■□□ 2.02
NEDD4L-237ENST00000617539 ZDHHC15Q96MV8 337 aa27.69■■■□□ 2.02
NEDD4L-237ENST00000617539 TMEM39BQ9GZU3 492 aa27.69■■■□□ 2.02
NEDD4L-237ENST00000617539 CEP126Q9P2H0 1117 aa27.69■■■□□ 2.02
NEDD4L-237ENST00000617539 HDAC5Q9UQL6 1122 aa27.69■■■□□ 2.02
NEDD4L-237ENST00000617539 CCDC85CA6NKD9 419 aa27.68■■■□□ 2.02
NEDD4L-237ENST00000617539 CACNB3P54284 484 aa27.68■■■□□ 2.02
NEDD4L-237ENST00000617539 SREBF2Q12772 1141 aa27.68■■■□□ 2.02
NEDD4L-237ENST00000617539 ATF7IPQ6VMQ6 1270 aa27.68■■■□□ 2.02
NEDD4L-237ENST00000617539 SLC10A4Q96EP9 437 aa27.68■■■□□ 2.02
NEDD4L-237ENST00000617539 WNK4Q96J92 1243 aa27.68■■■□□ 2.02
NEDD4L-237ENST00000617539 MRIQ9BWK5 157 aa27.68■■■□□ 2.02
NEDD4L-237ENST00000617539 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.68■■■□□ 2.02
NEDD4L-237ENST00000617539 SUGT1Q9Y2Z0 365 aa27.68■■■□□ 2.02
NEDD4L-237ENST00000617539 UNCXA6NJT0 531 aa27.67■■■□□ 2.02
NEDD4L-237ENST00000617539 GNAI3P08754 354 aa27.67■■■□□ 2.02
NEDD4L-237ENST00000617539 MTX1Q13505 466 aa27.67■■■□□ 2.02
NEDD4L-237ENST00000617539 APOBEC3HQ6NTF7 200 aaKnown RBP27.67■■■□□ 2.02
NEDD4L-237ENST00000617539 FRAT1Q92837 279 aaPredicted RBP27.67■■■□□ 2.02
NEDD4L-237ENST00000617539 GJA5P36382 358 aa27.66■■■□□ 2.02
NEDD4L-237ENST00000617539 IREB2P48200 963 aaKnown RBP27.66■■■□□ 2.02
NEDD4L-237ENST00000617539 HNRNPUQ00839 825 aaKnown RBP eCLIP27.66■■■□□ 2.02
NEDD4L-237ENST00000617539 IPO8O15397 1037 aaKnown RBP27.65■■■□□ 2.02
NEDD4L-237ENST00000617539 ZBTB48P10074 688 aaPredicted RBP27.65■■■□□ 2.02
NEDD4L-237ENST00000617539 ADORA1P30542 326 aa27.65■■■□□ 2.02
NEDD4L-237ENST00000617539 PHKA1P46020 1223 aa27.65■■■□□ 2.02
NEDD4L-237ENST00000617539 WDR66Q8TBY9 1149 aa27.65■■■□□ 2.02
NEDD4L-237ENST00000617539 R3HDMLQ9H3Y0 253 aa27.65■■■□□ 2.02
NEDD4L-237ENST00000617539 MAST3O60307 1309 aa27.65■■■□□ 2.02
NEDD4L-237ENST00000617539 SRGAP3O43295 1099 aa27.64■■■□□ 2.02
NEDD4L-237ENST00000617539 CLUAP1Q96AJ1 413 aa27.64■■■□□ 2.02
NEDD4L-237ENST00000617539 CFHR5Q9BXR6 569 aa27.64■■■□□ 2.02
NEDD4L-237ENST00000617539 PRDX5P30044 214 aa27.63■■■□□ 2.01
NEDD4L-237ENST00000617539 TNNI2P48788 182 aa27.63■■■□□ 2.01
NEDD4L-237ENST00000617539 HHIPL2Q6UWX4 724 aa27.63■■■□□ 2.01
NEDD4L-237ENST00000617539 ANKRD13AQ8IZ07 590 aa27.63■■■□□ 2.01
NEDD4L-237ENST00000617539 ZNF296Q8WUU4 475 aaPredicted RBP27.63■■■□□ 2.01
NEDD4L-237ENST00000617539 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.63■■■□□ 2.01
NEDD4L-237ENST00000617539 MANSC4A6NHS7 340 aaPredicted RBP27.62■■■□□ 2.01
NEDD4L-237ENST00000617539 NOM1Q5C9Z4 860 aaKnown RBP27.61■■■□□ 2.01
NEDD4L-237ENST00000617539 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.61■■■□□ 2.01
NEDD4L-237ENST00000617539 CTU1Q7Z7A3 348 aaKnown RBP27.61■■■□□ 2.01
NEDD4L-237ENST00000617539 IFNL1Q8IU54 200 aa27.61■■■□□ 2.01
NEDD4L-237ENST00000617539 GPR25O00155 361 aa27.6■■■□□ 2.01
NEDD4L-237ENST00000617539 IGF2BP3O00425 579 aaKnown RBP eCLIP27.6■■■□□ 2.01
NEDD4L-237ENST00000617539 TIMM10P62072 90 aa27.6■■■□□ 2.01
NEDD4L-237ENST00000617539 DIXDC1Q155Q3 683 aa27.6■■■□□ 2.01
NEDD4L-237ENST00000617539 FKBP1CQ5VVH2 108 aa27.6■■■□□ 2.01
NEDD4L-237ENST00000617539 CCDC102BQ68D86 513 aa27.6■■■□□ 2.01
NEDD4L-237ENST00000617539 FAM83AQ86UY5 434 aa27.6■■■□□ 2.01
NEDD4L-237ENST00000617539 TMEM57Q8N5G2 664 aa27.6■■■□□ 2.01
NEDD4L-237ENST00000617539 ELP3Q9H9T3 547 aa27.6■■■□□ 2.01
NEDD4L-237ENST00000617539 DAGLAQ9Y4D2 1042 aa27.6■■■□□ 2.01
NEDD4L-237ENST00000617539 SALL1Q9NSC2 1324 aa27.6■■■□□ 2.01
NEDD4L-237ENST00000617539 ZBTB22O15209 634 aa27.59■■■□□ 2.01
NEDD4L-237ENST00000617539 TFCP2Q12800 502 aa27.59■■■□□ 2.01
NEDD4L-237ENST00000617539 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.59■■■□□ 2.012e-7■■□□□ 13.8
NEDD4L-237ENST00000617539 CNKSR2Q8WXI2 1034 aa27.59■■■□□ 2.01
NEDD4L-237ENST00000617539 GNL3LQ9NVN8 582 aaKnown RBP27.59■■■□□ 2.01
NEDD4L-237ENST00000617539 MYH2Q9UKX2 1941 aa27.59■■■□□ 2.01
NEDD4L-237ENST00000617539 PNMA6EA0A0J9YXQ4 647 aa27.58■■■□□ 2.01
NEDD4L-237ENST00000617539 SEMA3EO15041 775 aa27.58■■■□□ 2.01
NEDD4L-237ENST00000617539 GNAI2P04899 355 aa27.58■■■□□ 2.01
NEDD4L-237ENST00000617539 INHBEP58166 350 aa27.58■■■□□ 2.01
NEDD4L-237ENST00000617539 VGLL4Q14135 290 aa27.58■■■□□ 2.01
NEDD4L-237ENST00000617539 OPTNQ96CV9 577 aa27.58■■■□□ 2.01
NEDD4L-237ENST00000617539 DENND2AQ9ULE3 1009 aa27.58■■■□□ 2.01
NEDD4L-237ENST00000617539 HTTP42858 3142 aa27.57■■■□□ 2
NEDD4L-237ENST00000617539 RASGRF1Q13972 1273 aa27.57■■■□□ 2
NEDD4L-237ENST00000617539 ZKSCAN2Q63HK3 967 aa27.57■■■□□ 2
NEDD4L-237ENST00000617539 TMOD2Q9NZR1 351 aa27.57■■■□□ 2
NEDD4L-237ENST00000617539 RPAP1Q9BWH6 1393 aaPredicted RBP27.57■■■□□ 2
NEDD4L-237ENST00000617539 TNRC18O15417 2968 aaPredicted RBP27.56■■■□□ 2
NEDD4L-237ENST00000617539 A0A1B0GUL7 405 aa27.56■■■□□ 2
NEDD4L-237ENST00000617539 LDHBP07195 334 aaKnown RBP27.56■■■□□ 2
NEDD4L-237ENST00000617539 RGS19P49795 217 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms