RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 AKAP11Q9UKA4 1901 aa18.94■□□□□ 0.62
PCDHGC3-204ENST00000617222 H7C1D1 291 aa18.94■□□□□ 0.62
PCDHGC3-204ENST00000617222 MECOMQ03112 1051 aa18.94■□□□□ 0.62
PCDHGC3-204ENST00000617222 KBTBD3Q8NAB2 608 aa18.94■□□□□ 0.62
PCDHGC3-204ENST00000617222 RILPL2Q969X0 211 aa18.94■□□□□ 0.62
PCDHGC3-204ENST00000617222 EVI5LQ96CN4 794 aa18.94■□□□□ 0.62
PCDHGC3-204ENST00000617222 GSPT1P15170 499 aaKnown RBP18.93■□□□□ 0.62
PCDHGC3-204ENST00000617222 ZNF280AP59817 542 aaPredicted RBP18.93■□□□□ 0.62
PCDHGC3-204ENST00000617222 DIXDC1Q155Q3 683 aa18.93■□□□□ 0.62
PCDHGC3-204ENST00000617222 RBM26Q5T8P6 1007 aaKnown RBP18.93■□□□□ 0.62
PCDHGC3-204ENST00000617222 CNTROBQ8N137 903 aa18.93■□□□□ 0.62
PCDHGC3-204ENST00000617222 NSUN4Q96CB9 384 aaKnown RBP18.93■□□□□ 0.62
PCDHGC3-204ENST00000617222 RRAGCQ9HB90 399 aa18.93■□□□□ 0.62
PCDHGC3-204ENST00000617222 HACL1Q9UJ83 578 aa18.93■□□□□ 0.62
PCDHGC3-204ENST00000617222 MAST3O60307 1309 aa18.93■□□□□ 0.62
PCDHGC3-204ENST00000617222 POTECB2RU33 542 aa18.92■□□□□ 0.62
PCDHGC3-204ENST00000617222 CRKP46108 304 aa18.92■□□□□ 0.62
PCDHGC3-204ENST00000617222 RBM5P52756 815 aaKnown RBP eCLIP18.92■□□□□ 0.62
PCDHGC3-204ENST00000617222 SLC9C2Q5TAH2 1124 aa18.92■□□□□ 0.62
PCDHGC3-204ENST00000617222 NAA16Q6N069 864 aaPredicted RBP18.92■□□□□ 0.62
PCDHGC3-204ENST00000617222 SAMD7Q7Z3H4 446 aa18.92■□□□□ 0.62
PCDHGC3-204ENST00000617222 MAGEB6Q8N7X4 407 aa18.92■□□□□ 0.62
PCDHGC3-204ENST00000617222 ZNF384Q8TF68 577 aa18.92■□□□□ 0.62
PCDHGC3-204ENST00000617222 FSD1Q9BTV5 496 aa18.92■□□□□ 0.62
PCDHGC3-204ENST00000617222 MRIQ9BWK5 157 aa18.92■□□□□ 0.62
PCDHGC3-204ENST00000617222 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.92■□□□□ 0.62
PCDHGC3-204ENST00000617222 IGSF3O75054 1194 aa18.91■□□□□ 0.62
PCDHGC3-204ENST00000617222 LDHCP07864 332 aa18.91■□□□□ 0.62
PCDHGC3-204ENST00000617222 PDE6AP16499 860 aa18.91■□□□□ 0.62
PCDHGC3-204ENST00000617222 CYP7A1P22680 504 aa18.91■□□□□ 0.62
PCDHGC3-204ENST00000617222 YY1P25490 414 aa18.91■□□□□ 0.62
PCDHGC3-204ENST00000617222 MMP14P50281 582 aa18.91■□□□□ 0.62
PCDHGC3-204ENST00000617222 GSTO1P78417 241 aa18.91■□□□□ 0.62
PCDHGC3-204ENST00000617222 HDLBPQ00341 1268 aaKnown RBP18.91■□□□□ 0.62
PCDHGC3-204ENST00000617222 CFAP100Q494V2 611 aa18.91■□□□□ 0.62
PCDHGC3-204ENST00000617222 TBC1D10BQ4KMP7 808 aaPredicted RBP18.91■□□□□ 0.62
PCDHGC3-204ENST00000617222 TEKT1Q969V4 418 aa18.91■□□□□ 0.62
PCDHGC3-204ENST00000617222 MYOZ2Q9NPC6 264 aa18.91■□□□□ 0.62
PCDHGC3-204ENST00000617222 SERPINA10Q9UK55 444 aa18.91■□□□□ 0.62
PCDHGC3-204ENST00000617222 PCDHAC2Q9Y5I4 1007 aa18.91■□□□□ 0.62
PCDHGC3-204ENST00000617222 IQCA1LA6NCM1 817 aa18.9■□□□□ 0.62
PCDHGC3-204ENST00000617222 CHGBP05060 677 aa18.9■□□□□ 0.62
PCDHGC3-204ENST00000617222 SDSP20132 328 aa18.9■□□□□ 0.62
PCDHGC3-204ENST00000617222 DLGAP5Q15398 846 aa18.9■□□□□ 0.62
PCDHGC3-204ENST00000617222 SLFNL1Q499Z3 407 aa18.9■□□□□ 0.62
PCDHGC3-204ENST00000617222 HHIPL2Q6UWX4 724 aa18.9■□□□□ 0.62
PCDHGC3-204ENST00000617222 SLF2Q8IX21 1173 aa18.9■□□□□ 0.62
PCDHGC3-204ENST00000617222 NMRK2Q9NPI5 230 aa18.9■□□□□ 0.62
PCDHGC3-204ENST00000617222 ADARB2Q9NS39 739 aaKnown RBP18.9■□□□□ 0.62
PCDHGC3-204ENST00000617222 PSME4Q14997 1843 aa18.9■□□□□ 0.62
PCDHGC3-204ENST00000617222 RNF113AO15541 343 aaKnown RBP18.89■□□□□ 0.61
PCDHGC3-204ENST00000617222 EGFRP00533 1210 aa18.89■□□□□ 0.61
PCDHGC3-204ENST00000617222 VEGFAP15692 232 aaPredicted RBP18.89■□□□□ 0.61
PCDHGC3-204ENST00000617222 EPHX2P34913 555 aa18.89■□□□□ 0.61
PCDHGC3-204ENST00000617222 ADD2P35612 726 aa18.89■□□□□ 0.61
PCDHGC3-204ENST00000617222 ZSCAN25Q6NSZ9 544 aa18.89■□□□□ 0.61
PCDHGC3-204ENST00000617222 TRPM4Q8TD43 1214 aa18.89■□□□□ 0.61
PCDHGC3-204ENST00000617222 TAF1DQ9H5J8 278 aaPredicted RBP18.89■□□□□ 0.61
PCDHGC3-204ENST00000617222 DAGLAQ9Y4D2 1042 aa18.89■□□□□ 0.61
PCDHGC3-204ENST00000617222 MYH13Q9UKX3 1938 aa18.89■□□□□ 0.61
PCDHGC3-204ENST00000617222 ZNF532Q9HCE3 1301 aa18.89■□□□□ 0.61
PCDHGC3-204ENST00000617222 ZNF646O15015 1829 aaPredicted RBP18.88■□□□□ 0.61
PCDHGC3-204ENST00000617222 KIF4BQ2VIQ3 1234 aa18.88■□□□□ 0.61
PCDHGC3-204ENST00000617222 LRRFIP1Q32MZ4 808 aaKnown RBP18.88■□□□□ 0.61
PCDHGC3-204ENST00000617222 BMP2KLQ5H9B9 411 aa18.88■□□□□ 0.61
PCDHGC3-204ENST00000617222 FAM163AQ96GL9 167 aaPredicted RBP18.88■□□□□ 0.61
PCDHGC3-204ENST00000617222 PRMT6Q96LA8 375 aaPredicted RBP18.88■□□□□ 0.61
PCDHGC3-204ENST00000617222 ZDHHC15Q96MV8 337 aa18.88■□□□□ 0.61
PCDHGC3-204ENST00000617222 MROH7-TTC4A0A0A0MT08 1334 aa18.87■□□□□ 0.61
PCDHGC3-204ENST00000617222 TCRBV5S4A2TA0A5A2 114 aa18.87■□□□□ 0.61
PCDHGC3-204ENST00000617222 GAKO14976 1311 aa18.87■□□□□ 0.61
PCDHGC3-204ENST00000617222 HIRAP54198 1017 aaPredicted RBP18.87■□□□□ 0.61
PCDHGC3-204ENST00000617222 UBE3CQ15386 1083 aa18.87■□□□□ 0.61
PCDHGC3-204ENST00000617222 APOBEC3HQ6NTF7 200 aaKnown RBP18.87■□□□□ 0.61
PCDHGC3-204ENST00000617222 ADGRA1Q86SQ6 560 aa18.87■□□□□ 0.61
PCDHGC3-204ENST00000617222 MTMR14Q8NCE2 650 aa18.87■□□□□ 0.61
PCDHGC3-204ENST00000617222 ZBED3Q96IU2 234 aaPredicted RBP18.87■□□□□ 0.61
PCDHGC3-204ENST00000617222 SPDYE2BA6NHP3 402 aa18.86■□□□□ 0.61
PCDHGC3-204ENST00000617222 ZFYP08048 801 aaPredicted RBP18.86■□□□□ 0.61
PCDHGC3-204ENST00000617222 SPDYE6P0CI01 402 aa18.86■□□□□ 0.61
PCDHGC3-204ENST00000617222 NBPF9Q3BBW0 867 aa18.86■□□□□ 0.61
PCDHGC3-204ENST00000617222 TMED8Q6PL24 325 aaPredicted RBP18.86■□□□□ 0.61
PCDHGC3-204ENST00000617222 MIGA1Q8NAN2 632 aa18.86■□□□□ 0.61
PCDHGC3-204ENST00000617222 GPBP1L1Q9HC44 474 aaPredicted RBP18.86■□□□□ 0.61
PCDHGC3-204ENST00000617222 GPR75-ASB3A0A0A6YYF3 556 aa18.85■□□□□ 0.61
PCDHGC3-204ENST00000617222 WNT10BO00744 389 aa18.85■□□□□ 0.61
PCDHGC3-204ENST00000617222 BTDP43251 543 aa18.85■□□□□ 0.61
PCDHGC3-204ENST00000617222 EAPPQ56P03 285 aaPredicted RBP18.85■□□□□ 0.61
PCDHGC3-204ENST00000617222 USP50Q70EL3 339 aaPredicted RBP18.85■□□□□ 0.61
PCDHGC3-204ENST00000617222 NOL10Q9BSC4 688 aaKnown RBP18.85■□□□□ 0.61
PCDHGC3-204ENST00000617222 AATFQ9NY61 560 aaKnown RBP eCLIP18.85■□□□□ 0.61
PCDHGC3-204ENST00000617222 WDR90Q96KV7 1748 aa18.85■□□□□ 0.61
PCDHGC3-204ENST00000617222 BAG3O95817 575 aa18.84■□□□□ 0.61
PCDHGC3-204ENST00000617222 DYNLL1P63167 89 aaKnown RBP18.84■□□□□ 0.61
PCDHGC3-204ENST00000617222 TICAM2Q86XR7 235 aa18.84■□□□□ 0.61
PCDHGC3-204ENST00000617222 TDRD3Q9H7E2 651 aaKnown RBP18.84■□□□□ 0.61
PCDHGC3-204ENST00000617222 USP40Q9NVE5 1235 aa18.84■□□□□ 0.61
PCDHGC3-204ENST00000617222 ASTN2O75129 1339 aaPredicted RBP18.83■□□□□ 0.61
PCDHGC3-204ENST00000617222 MAGEB6P1A0A0J9YX57 407 aa18.83■□□□□ 0.6
PCDHGC3-204ENST00000617222 CLRN2A0PK11 232 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms