RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 RASGRF1Q13972 1273 aa13.41□□□□□ -0.26
PCDHGA9-202ENST00000616887 APPBP2Q92624 585 aa13.41□□□□□ -0.26
PCDHGA9-202ENST00000616887 TSPY26PQ9H489 355 aa13.41□□□□□ -0.26
PCDHGA9-202ENST00000616887 LRP5O75197 1615 aa13.41□□□□□ -0.26
PCDHGA9-202ENST00000616887 PUM3Q15397 648 aaKnown RBP13.4□□□□□ -0.26
PCDHGA9-202ENST00000616887 ERFEQ4G0M1 354 aa13.4□□□□□ -0.26
PCDHGA9-202ENST00000616887 DHX32Q7L7V1 743 aaKnown RBP13.4□□□□□ -0.26
PCDHGA9-202ENST00000616887 SRP68Q9UHB9 627 aaKnown RBP13.4□□□□□ -0.26
PCDHGA9-202ENST00000616887 AKAP11Q9UKA4 1901 aa13.4□□□□□ -0.26
PCDHGA9-202ENST00000616887 RIOK3O14730 519 aaKnown RBP13.4□□□□□ -0.26
PCDHGA9-202ENST00000616887 BCAMP50895 628 aa13.4□□□□□ -0.26
PCDHGA9-202ENST00000616887 ANKRD7Q92527 254 aa13.4□□□□□ -0.26
PCDHGA9-202ENST00000616887 ALDH8A1Q9H2A2 487 aaPredicted RBP13.4□□□□□ -0.26
PCDHGA9-202ENST00000616887 SBF2Q86WG5 1849 aa13.4□□□□□ -0.26
PCDHGA9-202ENST00000616887 MYO5AQ9Y4I1 1855 aaKnown RBP13.4□□□□□ -0.26
PCDHGA9-202ENST00000616887 MBD3O95983 291 aa13.39□□□□□ -0.27
PCDHGA9-202ENST00000616887 ADD2P35612 726 aa13.39□□□□□ -0.27
PCDHGA9-202ENST00000616887 EXOSC10Q01780 885 aaKnown RBP13.39□□□□□ -0.27
PCDHGA9-202ENST00000616887 SLC51AQ86UW1 340 aa13.39□□□□□ -0.27
PCDHGA9-202ENST00000616887 OGFRQ9NZT2 677 aa13.39□□□□□ -0.27
PCDHGA9-202ENST00000616887 ZNF532Q9HCE3 1301 aa13.39□□□□□ -0.27
PCDHGA9-202ENST00000616887 LAMA4Q16363 1823 aa13.39□□□□□ -0.27
PCDHGA9-202ENST00000616887 CTDNEP1O95476 244 aa13.39□□□□□ -0.27
PCDHGA9-202ENST00000616887 LPIN2Q92539 896 aa13.39□□□□□ -0.27
PCDHGA9-202ENST00000616887 FEZ1Q99689 392 aa13.39□□□□□ -0.27
PCDHGA9-202ENST00000616887 TBC1D9BQ66K14 1250 aa13.38□□□□□ -0.27
PCDHGA9-202ENST00000616887 NHSQ6T4R5 1651 aa13.38□□□□□ -0.27
PCDHGA9-202ENST00000616887 DDX60Q8IY21 1712 aaKnown RBP13.38□□□□□ -0.27
PCDHGA9-202ENST00000616887 SPEF2Q9C093 1822 aa13.38□□□□□ -0.27
PCDHGA9-202ENST00000616887 NBPF3Q9H094 633 aa13.38□□□□□ -0.27
PCDHGA9-202ENST00000616887 MROH5Q6ZUA9 1318 aa13.38□□□□□ -0.27
PCDHGA9-202ENST00000616887 TRIM37O94972 964 aa13.38□□□□□ -0.27
PCDHGA9-202ENST00000616887 PDE6AP16499 860 aa13.38□□□□□ -0.27
PCDHGA9-202ENST00000616887 ARID4AP29374 1257 aaPredicted RBP13.38□□□□□ -0.27
PCDHGA9-202ENST00000616887 CHRNDQ07001 517 aa13.38□□□□□ -0.27
PCDHGA9-202ENST00000616887 CCDC152Q4G0S7 254 aa13.38□□□□□ -0.27
PCDHGA9-202ENST00000616887 PARP10Q53GL7 1025 aa13.38□□□□□ -0.27
PCDHGA9-202ENST00000616887 DHX37Q8IY37 1157 aaKnown RBP13.38□□□□□ -0.27
PCDHGA9-202ENST00000616887 TMEM87AQ8NBN3 555 aa13.38□□□□□ -0.27
PCDHGA9-202ENST00000616887 INCENPQ9NQS7 918 aa13.38□□□□□ -0.27
PCDHGA9-202ENST00000616887 USP25Q9UHP3 1055 aa13.38□□□□□ -0.27
PCDHGA9-202ENST00000616887 ABCC12Q96J65 1359 aa13.37□□□□□ -0.27
PCDHGA9-202ENST00000616887 ZFYP08048 801 aaPredicted RBP13.37□□□□□ -0.27
PCDHGA9-202ENST00000616887 SPATA5Q8NB90 893 aa13.37□□□□□ -0.27
PCDHGA9-202ENST00000616887 SPTLC3Q9NUV7 552 aa13.37□□□□□ -0.27
PCDHGA9-202ENST00000616887 TFIP11Q9UBB9 837 aaKnown RBP13.37□□□□□ -0.27
PCDHGA9-202ENST00000616887 RREB1Q92766 1687 aa13.37□□□□□ -0.27
PCDHGA9-202ENST00000616887 TTC6Q86TZ1 520 aa13.37□□□□□ -0.27
PCDHGA9-202ENST00000616887 TBC1D10CQ8IV04 446 aa13.37□□□□□ -0.27
PCDHGA9-202ENST00000616887 TAF1P21675 1872 aa13.37□□□□□ -0.27
PCDHGA9-202ENST00000616887 TCRBV5S4A2TA0A5A2 114 aa13.36□□□□□ -0.27
PCDHGA9-202ENST00000616887 APPP05067 770 aa13.36□□□□□ -0.27
PCDHGA9-202ENST00000616887 SLFN14P0C7P3 912 aa13.36□□□□□ -0.27
PCDHGA9-202ENST00000616887 IGHMBP2P38935 993 aaKnown RBP13.36□□□□□ -0.27
PCDHGA9-202ENST00000616887 ANTXR2P58335 489 aa13.36□□□□□ -0.27
PCDHGA9-202ENST00000616887 CHAF1AQ13111 956 aaPredicted RBP13.36□□□□□ -0.27
PCDHGA9-202ENST00000616887 IMMTQ16891 758 aaKnown RBP13.36□□□□□ -0.27
PCDHGA9-202ENST00000616887 MAGEB6Q8N7X4 407 aa13.36□□□□□ -0.27
PCDHGA9-202ENST00000616887 NSUN7Q8NE18 718 aaKnown RBP13.36□□□□□ -0.27
PCDHGA9-202ENST00000616887 SLC5A1P13866 664 aa13.36□□□□□ -0.27
PCDHGA9-202ENST00000616887 GABPB1Q06547 395 aaPredicted RBP13.36□□□□□ -0.27
PCDHGA9-202ENST00000616887 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.36□□□□□ -0.27
PCDHGA9-202ENST00000616887 COL5A3P25940 1745 aaPredicted RBP13.36□□□□□ -0.27
PCDHGA9-202ENST00000616887 PTPDC1A2A3K4 754 aa13.35□□□□□ -0.27
PCDHGA9-202ENST00000616887 GNPATO15228 680 aa13.35□□□□□ -0.27
PCDHGA9-202ENST00000616887 PFKFB2O60825 505 aa13.35□□□□□ -0.27
PCDHGA9-202ENST00000616887 HMGB1P09429 215 aaKnown RBP13.35□□□□□ -0.27
PCDHGA9-202ENST00000616887 BRD2P25440 801 aaKnown RBP13.35□□□□□ -0.27
PCDHGA9-202ENST00000616887 PDIA3P30101 505 aaKnown RBP13.35□□□□□ -0.27
PCDHGA9-202ENST00000616887 GUCY1B3Q02153 619 aa13.35□□□□□ -0.27
PCDHGA9-202ENST00000616887 CELF1Q92879 486 aaKnown RBP13.35□□□□□ -0.27
PCDHGA9-202ENST00000616887 ZNF512BQ96KM6 892 aaPredicted RBP13.35□□□□□ -0.27
PCDHGA9-202ENST00000616887 AGXT2Q9BYV1 514 aa13.35□□□□□ -0.27
PCDHGA9-202ENST00000616887 FTOQ9C0B1 505 aaKnown RBP eCLIP13.35□□□□□ -0.27
PCDHGA9-202ENST00000616887 ADCY5O95622 1261 aa13.35□□□□□ -0.27
PCDHGA9-202ENST00000616887 HMGB2P26583 209 aaKnown RBP13.35□□□□□ -0.27
PCDHGA9-202ENST00000616887 GYG1P46976 350 aa13.35□□□□□ -0.27
PCDHGA9-202ENST00000616887 STK11IPQ8N1F8 1099 aa13.35□□□□□ -0.27
PCDHGA9-202ENST00000616887 ZNF652Q9Y2D9 606 aa13.35□□□□□ -0.27
PCDHGA9-202ENST00000616887 ATP6V1DQ9Y5K8 247 aa13.35□□□□□ -0.27
PCDHGA9-202ENST00000616887 ZNF213O14771 459 aa13.34□□□□□ -0.27
PCDHGA9-202ENST00000616887 PRC1O43663 620 aa13.34□□□□□ -0.27
PCDHGA9-202ENST00000616887 PRKAB2O43741 272 aa13.34□□□□□ -0.27
PCDHGA9-202ENST00000616887 PHF14O94880 888 aa13.34□□□□□ -0.27
PCDHGA9-202ENST00000616887 KLRK1P26718 216 aa13.34□□□□□ -0.27
PCDHGA9-202ENST00000616887 UBE2HP62256 183 aa13.34□□□□□ -0.27
PCDHGA9-202ENST00000616887 LRRFIP1Q32MZ4 808 aaKnown RBP13.34□□□□□ -0.27
PCDHGA9-202ENST00000616887 MB21D2Q8IYB1 491 aaPredicted RBP13.34□□□□□ -0.27
PCDHGA9-202ENST00000616887 AK7Q96M32 723 aa13.34□□□□□ -0.27
PCDHGA9-202ENST00000616887 ARMT1Q9H993 441 aa13.34□□□□□ -0.27
PCDHGA9-202ENST00000616887 SENP2Q9HC62 589 aa13.34□□□□□ -0.27
PCDHGA9-202ENST00000616887 EPB41L4AQ9HCS5 686 aaPredicted RBP13.34□□□□□ -0.27
PCDHGA9-202ENST00000616887 RGL2O15211 777 aa13.34□□□□□ -0.27
PCDHGA9-202ENST00000616887 RXRAP19793 462 aa13.34□□□□□ -0.27
PCDHGA9-202ENST00000616887 MIGA1Q8NAN2 632 aa13.34□□□□□ -0.27
PCDHGA9-202ENST00000616887 CCDC66A2RUB6 948 aa13.33□□□□□ -0.27
PCDHGA9-202ENST00000616887 MBD4O95243 580 aa13.33□□□□□ -0.27
PCDHGA9-202ENST00000616887 PDCP20941 246 aa13.33□□□□□ -0.27
PCDHGA9-202ENST00000616887 CEBPZQ03701 1054 aaKnown RBP13.33□□□□□ -0.27
PCDHGA9-202ENST00000616887 TTF1Q15361 905 aaPredicted RBP13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms