RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 A6NNZ2 444 aa15.31■□□□□ 0.04
PPP4R3B-205ENST00000616288 MXRA7P84157 204 aa15.31■□□□□ 0.04
PPP4R3B-205ENST00000616288 TUBB8Q3ZCM7 444 aa15.31■□□□□ 0.04
PPP4R3B-205ENST00000616288 CCDC82Q8N4S0 544 aa15.31■□□□□ 0.04
PPP4R3B-205ENST00000616288 THOC1Q96FV9 657 aaKnown RBP15.31■□□□□ 0.04
PPP4R3B-205ENST00000616288 CCDC178Q5BJE1 867 aa15.31■□□□□ 0.04
PPP4R3B-205ENST00000616288 GSPT2Q8IYD1 628 aaKnown RBP15.31■□□□□ 0.04
PPP4R3B-205ENST00000616288 UBAC1Q9BSL1 405 aa15.31■□□□□ 0.04
PPP4R3B-205ENST00000616288 PARP3Q9Y6F1 533 aa15.31■□□□□ 0.04
PPP4R3B-205ENST00000616288 GOLGA8BA8MQT2 603 aa15.3■□□□□ 0.04
PPP4R3B-205ENST00000616288 KRT86O43790 486 aa15.3■□□□□ 0.04
PPP4R3B-205ENST00000616288 STX10O60499 249 aa15.3■□□□□ 0.04
PPP4R3B-205ENST00000616288 NDUFA8P51970 172 aa15.3■□□□□ 0.04
PPP4R3B-205ENST00000616288 HIBCHQ6NVY1 386 aaPredicted RBP15.3■□□□□ 0.04
PPP4R3B-205ENST00000616288 ARHGAP31Q2M1Z3 1444 aa15.3■□□□□ 0.04
PPP4R3B-205ENST00000616288 CUTAO60888 179 aa15.3■□□□□ 0.04
PPP4R3B-205ENST00000616288 IQCB1Q15051 598 aa15.3■□□□□ 0.04
PPP4R3B-205ENST00000616288 NUTM2AQ8IVF1 878 aaPredicted RBP15.3■□□□□ 0.04
PPP4R3B-205ENST00000616288 TAF4BQ92750 862 aa15.3■□□□□ 0.04
PPP4R3B-205ENST00000616288 CARMIL2Q6F5E8 1435 aa15.3■□□□□ 0.04
PPP4R3B-205ENST00000616288 MYO1EQ12965 1108 aa15.3■□□□□ 0.04
PPP4R3B-205ENST00000616288 TOGARAM2Q6ZUX3 1019 aa15.3■□□□□ 0.04
PPP4R3B-205ENST00000616288 G2E3Q7L622 706 aa15.3■□□□□ 0.04
PPP4R3B-205ENST00000616288 SPATS2Q86XZ4 545 aaKnown RBP15.3■□□□□ 0.04
PPP4R3B-205ENST00000616288 EHBP1Q8NDI1 1231 aa15.3■□□□□ 0.04
PPP4R3B-205ENST00000616288 AIDAQ96BJ3 306 aa15.3■□□□□ 0.04
PPP4R3B-205ENST00000616288 KAT14Q9H8E8 782 aa15.3■□□□□ 0.04
PPP4R3B-205ENST00000616288 KIF9Q9HAQ2 790 aa15.3■□□□□ 0.04
PPP4R3B-205ENST00000616288 KIF3CO14782 793 aa15.29■□□□□ 0.04
PPP4R3B-205ENST00000616288 NEFHP12036 1026 aa15.29■□□□□ 0.04
PPP4R3B-205ENST00000616288 ZC3H6P61129 1189 aaKnown RBP15.29■□□□□ 0.04
PPP4R3B-205ENST00000616288 NAA15Q9BXJ9 866 aaKnown RBP15.29■□□□□ 0.04
PPP4R3B-205ENST00000616288 ESF1Q9H501 851 aaKnown RBP15.29■□□□□ 0.04
PPP4R3B-205ENST00000616288 FAM53CQ9NYF3 392 aa15.29■□□□□ 0.04
PPP4R3B-205ENST00000616288 STK38LQ9Y2H1 464 aa15.29■□□□□ 0.04
PPP4R3B-205ENST00000616288 RPS6KB1P23443 525 aa15.29■□□□□ 0.04
PPP4R3B-205ENST00000616288 TAF7Q15545 349 aaPredicted RBP15.29■□□□□ 0.04
PPP4R3B-205ENST00000616288 CCDC6Q16204 474 aa15.29■□□□□ 0.04
PPP4R3B-205ENST00000616288 CNGA4Q8IV77 575 aa15.29■□□□□ 0.04
PPP4R3B-205ENST00000616288 CCDC47Q96A33 483 aaKnown RBP15.29■□□□□ 0.04
PPP4R3B-205ENST00000616288 FAM227BQ96M60 508 aa15.29■□□□□ 0.04
PPP4R3B-205ENST00000616288 SELENOSQ9BQE4 189 aa15.29■□□□□ 0.04
PPP4R3B-205ENST00000616288 SMIM23A6NLE4 172 aa15.29■□□□□ 0.04
PPP4R3B-205ENST00000616288 EXOC5O00471 708 aa15.29■□□□□ 0.04
PPP4R3B-205ENST00000616288 SLC27A2O14975 620 aa15.29■□□□□ 0.04
PPP4R3B-205ENST00000616288 NEXNQ0ZGT2 675 aa15.29■□□□□ 0.04
PPP4R3B-205ENST00000616288 PNOCQ13519 176 aa15.29■□□□□ 0.04
PPP4R3B-205ENST00000616288 CCDC129Q6ZRS4 1044 aa15.29■□□□□ 0.04
PPP4R3B-205ENST00000616288 SAR1BQ9Y6B6 198 aa15.29■□□□□ 0.04
PPP4R3B-205ENST00000616288 GRIN2AQ12879 1464 aa15.28■□□□□ 0.04
PPP4R3B-205ENST00000616288 TLDC2A0PJX2 215 aa15.28■□□□□ 0.04
PPP4R3B-205ENST00000616288 SOWAHDA6NJG2 315 aa15.28■□□□□ 0.04
PPP4R3B-205ENST00000616288 MRPS25P82663 173 aaKnown RBP15.28■□□□□ 0.04
PPP4R3B-205ENST00000616288 FCHSD1Q86WN1 690 aa15.28■□□□□ 0.04
PPP4R3B-205ENST00000616288 GOLGA8KD6RF30 607 aa15.28■□□□□ 0.04
PPP4R3B-205ENST00000616288 CAND2O75155 1236 aa15.28■□□□□ 0.04
PPP4R3B-205ENST00000616288 CAPRIN2Q6IMN6 1127 aaKnown RBP15.28■□□□□ 0.04
PPP4R3B-205ENST00000616288 LMNTD2Q8IXW0 634 aa15.28■□□□□ 0.04
PPP4R3B-205ENST00000616288 ZNF513Q8N8E2 541 aaPredicted RBP15.28■□□□□ 0.04
PPP4R3B-205ENST00000616288 JPH4Q96JJ6 628 aa15.28■□□□□ 0.04
PPP4R3B-205ENST00000616288 HMG20BQ9P0W2 317 aa15.28■□□□□ 0.04
PPP4R3B-205ENST00000616288 ZNF330Q9Y3S2 320 aaPredicted RBP15.28■□□□□ 0.04
PPP4R3B-205ENST00000616288 FANCD2Q9BXW9 1451 aa15.28■□□□□ 0.04
PPP4R3B-205ENST00000616288 RNASE9P60153 205 aaKnown RBP15.28■□□□□ 0.04
PPP4R3B-205ENST00000616288 CACNA2D3Q8IZS8 1091 aa15.28■□□□□ 0.04
PPP4R3B-205ENST00000616288 PCDHA7Q9UN72 937 aa15.28■□□□□ 0.04
PPP4R3B-205ENST00000616288 LAMC3Q9Y6N6 1575 aa15.28■□□□□ 0.04
PPP4R3B-205ENST00000616288 ERCC6Q03468 1493 aa15.27■□□□□ 0.04
PPP4R3B-205ENST00000616288 LACTBP83111 547 aaPredicted RBP15.27■□□□□ 0.04
PPP4R3B-205ENST00000616288 GIGYF2Q6Y7W6 1299 aaKnown RBP15.27■□□□□ 0.04
PPP4R3B-205ENST00000616288 ALS2CR12Q96Q35 445 aa15.27■□□□□ 0.04
PPP4R3B-205ENST00000616288 TRIM21P19474 475 aaKnown RBP15.27■□□□□ 0.04
PPP4R3B-205ENST00000616288 GUCY2FP51841 1108 aa15.27■□□□□ 0.04
PPP4R3B-205ENST00000616288 KIF5AQ12840 1032 aa15.27■□□□□ 0.04
PPP4R3B-205ENST00000616288 VPS16Q9H269 839 aa15.27■□□□□ 0.04
PPP4R3B-205ENST00000616288 CFAP74Q9C0B2 1584 aa15.27■□□□□ 0.03
PPP4R3B-205ENST00000616288 TMEM232C9JQI7 657 aa15.27■□□□□ 0.03
PPP4R3B-205ENST00000616288 HAND2P61296 217 aa15.27■□□□□ 0.03
PPP4R3B-205ENST00000616288 HSP90AB2PQ58FF8 381 aa15.27■□□□□ 0.03
PPP4R3B-205ENST00000616288 PRAM1Q96QH2 718 aa15.27■□□□□ 0.03
PPP4R3B-205ENST00000616288 TMX4Q9H1E5 349 aaPredicted RBP15.27■□□□□ 0.03
PPP4R3B-205ENST00000616288 CC2D2AQ9P2K1 1620 aa15.27■□□□□ 0.03
PPP4R3B-205ENST00000616288 VIMP08670 466 aaKnown RBP15.26■□□□□ 0.03
PPP4R3B-205ENST00000616288 C8orf74Q6P047 294 aa15.26■□□□□ 0.03
PPP4R3B-205ENST00000616288 DHX40Q8IX18 779 aaKnown RBP15.26■□□□□ 0.03
PPP4R3B-205ENST00000616288 FAM167BQ9BTA0 163 aa15.26■□□□□ 0.03
PPP4R3B-205ENST00000616288 U3KPZ7 1027 aaPredicted RBP15.26■□□□□ 0.03
PPP4R3B-205ENST00000616288 POLE2P56282 527 aa15.26■□□□□ 0.03
PPP4R3B-205ENST00000616288 LMOD2Q6P5Q4 547 aa15.26■□□□□ 0.03
PPP4R3B-205ENST00000616288 MIEF2Q96C03 454 aa15.26■□□□□ 0.03
PPP4R3B-205ENST00000616288 TRIM4Q9C037 500 aa15.26■□□□□ 0.03
PPP4R3B-205ENST00000616288 E9PCH4 1651 aa15.26■□□□□ 0.03
PPP4R3B-205ENST00000616288 KDM5DQ9BY66 1539 aa15.26■□□□□ 0.03
PPP4R3B-205ENST00000616288 CYLC1P35663 651 aaPredicted RBP15.26■□□□□ 0.03
PPP4R3B-205ENST00000616288 MAP3K9P80192 1104 aa15.26■□□□□ 0.03
PPP4R3B-205ENST00000616288 ZNF827Q17R98 1081 aa15.26■□□□□ 0.03
PPP4R3B-205ENST00000616288 LRRC23Q53EV4 343 aaPredicted RBP15.26■□□□□ 0.03
PPP4R3B-205ENST00000616288 SWT1Q5T5J6 900 aaKnown RBP15.26■□□□□ 0.03
PPP4R3B-205ENST00000616288 TANGO6Q9C0B7 1094 aa15.26■□□□□ 0.03
PPP4R3B-205ENST00000616288 ZSWIM6Q9HCJ5 1215 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms