RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 DNAI1Q9UI46 699 aa6.48□□□□□ -1.37
SYNCRIP-204ENST00000616122 USP42Q9H9J4 1324 aaKnown RBP6.48□□□□□ -1.37
SYNCRIP-204ENST00000616122 ZSCAN12O43309 604 aa6.48□□□□□ -1.37
SYNCRIP-204ENST00000616122 GNG11P61952 73 aa6.48□□□□□ -1.37
SYNCRIP-204ENST00000616122 AKNAD1Q5T1N1 836 aa6.48□□□□□ -1.37
SYNCRIP-204ENST00000616122 KRI1Q8N9T8 703 aaKnown RBP6.48□□□□□ -1.37
SYNCRIP-204ENST00000616122 KCNH3Q9ULD8 1083 aa6.48□□□□□ -1.37
SYNCRIP-204ENST00000616122 TDRD7Q8NHU6 1098 aaKnown RBP6.48□□□□□ -1.37
SYNCRIP-204ENST00000616122 CACTINQ8WUQ7 758 aaKnown RBP6.48□□□□□ -1.37
SYNCRIP-204ENST00000616122 MRFAP1L1Q96HT8 127 aa6.48□□□□□ -1.37
SYNCRIP-204ENST00000616122 PCDHA5Q9Y5H7 936 aa6.48□□□□□ -1.37
SYNCRIP-204ENST00000616122 ZPR1O75312 459 aa6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 RFX5P48382 616 aaPredicted RBP6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 CBX1P83916 185 aa6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 SNW1Q13573 536 aaKnown RBP6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 STOX1Q6ZVD7 989 aa6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 ZNF771Q7L3S4 317 aaPredicted RBP6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 NLRP10Q86W26 655 aa6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 SMARCC1Q92922 1105 aaPredicted RBP6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 ARMT1Q9H993 441 aa6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 NFE2L3Q9Y4A8 694 aa6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 A0A1W2PQ27 194 aa6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 A0A1W2PQ64 194 aa6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 A0A1W2PQD8 194 aa6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 NLRP5P59047 1200 aa6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 PUS7LQ9H0K6 701 aaKnown RBP6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 PAXBP1Q9Y5B6 917 aa6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 CFAP74Q9C0B2 1584 aa6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 CIAO1O76071 339 aa6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 PIP4K2BP78356 416 aa6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 SOGA3Q5TF21 947 aa6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 TPTE2Q6XPS3 522 aa6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 LINC00301Q8NCQ3 95 aa6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 MYRIPQ8NFW9 859 aa6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 N4BP3O15049 544 aa6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 LDHCP07864 332 aa6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 RESTQ13127 1097 aa6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 PYCARDQ9ULZ3 195 aa6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 MRVI1Q9Y6F6 885 aa6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 V9GY48 417 aaPredicted RBP6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 MAP3K15Q6ZN16 1313 aa6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 BMP15O95972 392 aa6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 GNAT2P19087 354 aa6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 IL6STP40189 918 aaPredicted RBP6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 AFMP43652 599 aa6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 USP5P45974 858 aa6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 SCARF1Q14162 830 aa6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 SMARCE1Q969G3 411 aa6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 PGBD1Q96JS3 809 aa6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 AIFM3Q96NN9 605 aa6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 NRBP1Q9UHY1 535 aa6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 PIK3C2BO00750 1634 aa6.47□□□□□ -1.37
SYNCRIP-204ENST00000616122 PDE4BQ07343 736 aa6.46□□□□□ -1.37
SYNCRIP-204ENST00000616122 STIM1Q13586 685 aa6.46□□□□□ -1.37
SYNCRIP-204ENST00000616122 CMA1P23946 247 aa6.46□□□□□ -1.37
SYNCRIP-204ENST00000616122 ATP2B2Q01814 1243 aa6.46□□□□□ -1.37
SYNCRIP-204ENST00000616122 SLC39A14Q15043 492 aa6.46□□□□□ -1.37
SYNCRIP-204ENST00000616122 CEP135Q66GS9 1140 aa6.46□□□□□ -1.37
SYNCRIP-204ENST00000616122 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.46□□□□□ -1.37
SYNCRIP-204ENST00000616122 TICAM2Q86XR7 235 aa6.46□□□□□ -1.37
SYNCRIP-204ENST00000616122 ZNF444Q8N0Y2 327 aaPredicted RBP6.46□□□□□ -1.37
SYNCRIP-204ENST00000616122 ANKIB1Q9P2G1 1089 aa6.46□□□□□ -1.37
SYNCRIP-204ENST00000616122 KIAA1210Q9ULL0 1709 aa6.46□□□□□ -1.38
SYNCRIP-204ENST00000616122 RIOK3O14730 519 aaKnown RBP6.46□□□□□ -1.38
SYNCRIP-204ENST00000616122 SSBP05455 408 aaKnown RBP eCLIP6.46□□□□□ -1.38
SYNCRIP-204ENST00000616122 IDEP14735 1019 aa6.46□□□□□ -1.38
SYNCRIP-204ENST00000616122 STX17P56962 302 aa6.46□□□□□ -1.38
SYNCRIP-204ENST00000616122 GPS2Q13227 327 aa6.46□□□□□ -1.38
SYNCRIP-204ENST00000616122 HSP90B2PQ58FF3 399 aa6.46□□□□□ -1.38
SYNCRIP-204ENST00000616122 KANK3Q6NY19 840 aa6.46□□□□□ -1.38
SYNCRIP-204ENST00000616122 KLHL34Q8N239 644 aa6.46□□□□□ -1.38
SYNCRIP-204ENST00000616122 CCDC150Q8NCX0 1101 aa6.46□□□□□ -1.38
SYNCRIP-204ENST00000616122 XPO4Q9C0E2 1151 aaKnown RBP6.46□□□□□ -1.38
SYNCRIP-204ENST00000616122 USP17L12C9JPN9 530 aa6.46□□□□□ -1.38
SYNCRIP-204ENST00000616122 USP17L21D6R901 530 aa6.46□□□□□ -1.38
SYNCRIP-204ENST00000616122 PRKCSHP14314 528 aaPredicted RBP6.46□□□□□ -1.38
SYNCRIP-204ENST00000616122 KIF5BP33176 963 aa6.46□□□□□ -1.38
SYNCRIP-204ENST00000616122 RPS8P62241 208 aaKnown RBP6.46□□□□□ -1.38
SYNCRIP-204ENST00000616122 ATG9AQ7Z3C6 839 aa6.46□□□□□ -1.38
SYNCRIP-204ENST00000616122 SPATA5Q8NB90 893 aa6.46□□□□□ -1.38
SYNCRIP-204ENST00000616122 ISCA1Q9BUE6 129 aa6.46□□□□□ -1.38
SYNCRIP-204ENST00000616122 CCDC87Q9NVE4 849 aa6.46□□□□□ -1.38
SYNCRIP-204ENST00000616122 RTEL1Q9NZ71 1219 aa6.46□□□□□ -1.38
SYNCRIP-204ENST00000616122 KCNJ14Q9UNX9 436 aa6.46□□□□□ -1.38
SYNCRIP-204ENST00000616122 MYO3AQ8NEV4 1616 aa6.46□□□□□ -1.38
SYNCRIP-204ENST00000616122 NCAPD2Q15021 1401 aa6.46□□□□□ -1.38
SYNCRIP-204ENST00000616122 PFKFB1P16118 471 aa6.46□□□□□ -1.38
SYNCRIP-204ENST00000616122 KIF4BQ2VIQ3 1234 aa6.46□□□□□ -1.38
SYNCRIP-204ENST00000616122 IFNL3Q8IZI9 196 aa6.46□□□□□ -1.38
SYNCRIP-204ENST00000616122 ZNHIT6Q9NWK9 470 aaKnown RBP6.46□□□□□ -1.38
SYNCRIP-204ENST00000616122 MCM9Q9NXL9 1143 aa6.46□□□□□ -1.38
SYNCRIP-204ENST00000616122 hCG_1642624A0A1W2PR95 340 aa6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 CTSWP56202 376 aa6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 TEX35Q5T0J7 233 aa6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 DHX58Q96C10 678 aa6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 CRNKL1Q9BZJ0 848 aaKnown RBP6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 ZMYND15Q9H091 742 aa6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 JAG2Q9Y219 1238 aa6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 LOC102724428A0A0B4J2F2 783 aa6.45□□□□□ -1.38
SYNCRIP-204ENST00000616122 C6orf229H3BNL8 230 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms