RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 ZNF274Q96GC6 653 aaPredicted RBP14.43□□□□□ -0.1
MSH6-213ENST00000614496 CLIC6Q96NY7 704 aa14.43□□□□□ -0.1
MSH6-213ENST00000614496 NLRP12P59046 1061 aa14.42□□□□□ -0.1
MSH6-213ENST00000614496 MAP3K12Q12852 859 aa14.42□□□□□ -0.1
MSH6-213ENST00000614496 KRT40Q6A162 431 aa14.42□□□□□ -0.1
MSH6-213ENST00000614496 OSBP2Q969R2 916 aa14.42□□□□□ -0.1
MSH6-213ENST00000614496 ZFP91Q96JP5 570 aaPredicted RBP14.42□□□□□ -0.1
MSH6-213ENST00000614496 ANKRD26Q9UPS8 1709 aa14.42□□□□□ -0.1
MSH6-213ENST00000614496 ZMYM1Q5SVZ6 1142 aa14.42□□□□□ -0.1
MSH6-213ENST00000614496 MFSD6Q6ZSS7 791 aa14.42□□□□□ -0.1
MSH6-213ENST00000614496 TRMT44Q8IYL2 757 aaKnown RBP14.42□□□□□ -0.1
MSH6-213ENST00000614496 APPBP2Q92624 585 aa14.42□□□□□ -0.1
MSH6-213ENST00000614496 CARMIL3Q8ND23 1372 aa14.42□□□□□ -0.1
MSH6-213ENST00000614496 RANBP6O60518 1105 aaKnown RBP14.41□□□□□ -0.1
MSH6-213ENST00000614496 LZTFL1Q9NQ48 299 aa14.41□□□□□ -0.1
MSH6-213ENST00000614496 FBXO18Q8NFZ0 1043 aa14.41□□□□□ -0.1
MSH6-213ENST00000614496 DLG5Q8TDM6 1919 aa14.41□□□□□ -0.1
MSH6-213ENST00000614496 DHX58Q96C10 678 aa14.41□□□□□ -0.1
MSH6-213ENST00000614496 RNF216Q9NWF9 866 aaPredicted RBP14.41□□□□□ -0.1
MSH6-213ENST00000614496 ANGEL1Q9UNK9 670 aaKnown RBP14.41□□□□□ -0.1
MSH6-213ENST00000614496 PTPRUQ92729 1446 aa14.41□□□□□ -0.1
MSH6-213ENST00000614496 SLC4A8Q2Y0W8 1093 aa14.41□□□□□ -0.1
MSH6-213ENST00000614496 MIGA1Q8NAN2 632 aa14.41□□□□□ -0.1
MSH6-213ENST00000614496 ZNF827Q17R98 1081 aa14.4□□□□□ -0.1
MSH6-213ENST00000614496 CMTR1Q8N1G2 835 aaKnown RBP14.4□□□□□ -0.1
MSH6-213ENST00000614496 KCNH3Q9ULD8 1083 aa14.4□□□□□ -0.1
MSH6-213ENST00000614496 KCNJ14Q9UNX9 436 aa14.4□□□□□ -0.1
MSH6-213ENST00000614496 YEATS4O95619 227 aa14.4□□□□□ -0.1
MSH6-213ENST00000614496 EVCP57679 992 aa14.4□□□□□ -0.1
MSH6-213ENST00000614496 CAGE1Q8TC20 777 aa14.4□□□□□ -0.1
MSH6-213ENST00000614496 TCHHQ07283 1943 aa14.4□□□□□ -0.1
MSH6-213ENST00000614496 ATP1A3P13637 1013 aa14.4□□□□□ -0.1
MSH6-213ENST00000614496 WTAPQ15007 396 aa14.4□□□□□ -0.1
MSH6-213ENST00000614496 LINC00301Q8NCQ3 95 aa14.4□□□□□ -0.1
MSH6-213ENST00000614496 CCDC102AQ96A19 550 aa14.4□□□□□ -0.1
MSH6-213ENST00000614496 ITSN1Q15811 1721 aa14.39□□□□□ -0.11
MSH6-213ENST00000614496 KIF5CO60282 957 aa14.39□□□□□ -0.11
MSH6-213ENST00000614496 KIF20AO95235 890 aa14.39□□□□□ -0.11
MSH6-213ENST00000614496 RTEL1Q9NZ71 1219 aa14.39□□□□□ -0.11
MSH6-213ENST00000614496 TTF1Q15361 905 aaPredicted RBP14.39□□□□□ -0.11
MSH6-213ENST00000614496 RTN1Q16799 776 aa14.39□□□□□ -0.11
MSH6-213ENST00000614496 CCDC191Q8NCU4 936 aa14.39□□□□□ -0.11
MSH6-213ENST00000614496 IMPACTQ9P2X3 320 aa14.39□□□□□ -0.11
MSH6-213ENST00000614496 PUF60Q9UHX1 559 aaKnown RBP14.39□□□□□ -0.11
MSH6-213ENST00000614496 POLR2DO15514 142 aaKnown RBP14.39□□□□□ -0.11
MSH6-213ENST00000614496 CTDSPL2Q05D32 466 aa14.39□□□□□ -0.11
MSH6-213ENST00000614496 MAGEB6Q8N7X4 407 aa14.39□□□□□ -0.11
MSH6-213ENST00000614496 ADKP55263 362 aaKnown RBP14.38□□□□□ -0.11
MSH6-213ENST00000614496 IQCB1Q15051 598 aa14.38□□□□□ -0.11
MSH6-213ENST00000614496 BAG1Q99933 345 aaPredicted RBP14.38□□□□□ -0.11
MSH6-213ENST00000614496 FANCLQ9NW38 375 aa14.38□□□□□ -0.11
MSH6-213ENST00000614496 CEP131Q9UPN4 1083 aa14.38□□□□□ -0.11
MSH6-213ENST00000614496 hCG_1642624A0A1W2PR95 340 aa14.38□□□□□ -0.11
MSH6-213ENST00000614496 MCM6Q14566 821 aa14.38□□□□□ -0.11
MSH6-213ENST00000614496 SLC4A4Q9Y6R1 1079 aa14.38□□□□□ -0.11
MSH6-213ENST00000614496 ZNF609O15014 1411 aa14.38□□□□□ -0.11
MSH6-213ENST00000614496 TECPR2O15040 1411 aa14.38□□□□□ -0.11
MSH6-213ENST00000614496 CDC25BP30305 580 aa14.38□□□□□ -0.11
MSH6-213ENST00000614496 KRI1Q8N9T8 703 aaKnown RBP14.38□□□□□ -0.11
MSH6-213ENST00000614496 PPP1R13BQ96KQ4 1090 aa14.38□□□□□ -0.11
MSH6-213ENST00000614496 ERBB3P21860 1342 aa14.38□□□□□ -0.11
MSH6-213ENST00000614496 CCDC196A0A1B0GTZ2 297 aa14.37□□□□□ -0.11
MSH6-213ENST00000614496 MBD4O95243 580 aa14.37□□□□□ -0.11
MSH6-213ENST00000614496 PUS7LQ9H0K6 701 aaKnown RBP14.37□□□□□ -0.11
MSH6-213ENST00000614496 NFE2L3Q9Y4A8 694 aa14.37□□□□□ -0.11
MSH6-213ENST00000614496 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.37□□□□□ -0.113e-7■■■□□ 17.8
MSH6-213ENST00000614496 CEMIPQ8WUJ3 1361 aa14.37□□□□□ -0.11
MSH6-213ENST00000614496 MARCH6O60337 910 aa14.37□□□□□ -0.11
MSH6-213ENST00000614496 SLC5A1P13866 664 aa14.37□□□□□ -0.11
MSH6-213ENST00000614496 ITGA6P23229 1130 aa14.37□□□□□ -0.11
MSH6-213ENST00000614496 JAKMIP3Q5VZ66 844 aa14.37□□□□□ -0.11
MSH6-213ENST00000614496 FBXO38Q6PIJ6 1188 aa14.37□□□□□ -0.11
MSH6-213ENST00000614496 AK7Q96M32 723 aa14.37□□□□□ -0.11
MSH6-213ENST00000614496 NUP88Q99567 741 aaPredicted RBP14.37□□□□□ -0.11
MSH6-213ENST00000614496 DESI2Q9BSY9 194 aa14.37□□□□□ -0.11
MSH6-213ENST00000614496 RIMS1Q86UR5 1692 aaKnown RBP14.37□□□□□ -0.11
MSH6-213ENST00000614496 FAM193AP78312 1265 aa14.37□□□□□ -0.11
MSH6-213ENST00000614496 DIS3L2Q8IYB7 885 aaKnown RBP14.37□□□□□ -0.11
MSH6-213ENST00000614496 ARMT1Q9H993 441 aa14.37□□□□□ -0.11
MSH6-213ENST00000614496 CABP5Q9NP86 173 aa14.37□□□□□ -0.11
MSH6-213ENST00000614496 MED23Q9ULK4 1368 aa14.37□□□□□ -0.11
MSH6-213ENST00000614496 PXDNLA1KZ92 1463 aa14.37□□□□□ -0.11
MSH6-213ENST00000614496 STAMQ92783 540 aa14.37□□□□□ -0.11
MSH6-213ENST00000614496 ARFGAP3Q9NP61 516 aa14.37□□□□□ -0.11
MSH6-213ENST00000614496 NAP1L1P55209 391 aaKnown RBP14.36□□□□□ -0.11
MSH6-213ENST00000614496 C19orf44Q9H6X5 657 aa14.36□□□□□ -0.11
MSH6-213ENST00000614496 ZNF532Q9HCE3 1301 aa14.36□□□□□ -0.11
MSH6-213ENST00000614496 IRS4O14654 1257 aaPredicted RBP14.36□□□□□ -0.11
MSH6-213ENST00000614496 TXLNAP40222 546 aa14.36□□□□□ -0.11
MSH6-213ENST00000614496 LMAN1P49257 510 aa14.36□□□□□ -0.11
MSH6-213ENST00000614496 BICDL1Q6ZP65 573 aa14.36□□□□□ -0.11
MSH6-213ENST00000614496 SH3TC1Q8TE82 1336 aa14.36□□□□□ -0.11
MSH6-213ENST00000614496 N4BP3O15049 544 aa14.36□□□□□ -0.11
MSH6-213ENST00000614496 ERLIN1O75477 346 aa14.36□□□□□ -0.11
MSH6-213ENST00000614496 CMA1P23946 247 aa14.36□□□□□ -0.11
MSH6-213ENST00000614496 IGHMBP2P38935 993 aaKnown RBP14.36□□□□□ -0.11
MSH6-213ENST00000614496 ETF1P62495 437 aaKnown RBP14.36□□□□□ -0.11
MSH6-213ENST00000614496 LEKR1Q6ZMV7 388 aa14.36□□□□□ -0.11
MSH6-213ENST00000614496 DHX40Q8IX18 779 aaKnown RBP14.36□□□□□ -0.11
MSH6-213ENST00000614496 SMARCC2Q8TAQ2 1214 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms