RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 SKILP12757 684 aa13.06□□□□□ -0.32
ATF3-211ENST00000613954 LRRC24Q50LG9 513 aa13.06□□□□□ -0.32
ATF3-211ENST00000613954 TAF7LQ5H9L4 462 aa13.06□□□□□ -0.32
ATF3-211ENST00000613954 CLEC4GQ6UXB4 293 aa13.06□□□□□ -0.32
ATF3-211ENST00000613954 Q6ZUG5 572 aa13.06□□□□□ -0.32
ATF3-211ENST00000613954 ERO1AQ96HE7 468 aa13.06□□□□□ -0.32
ATF3-211ENST00000613954 UTP14AQ9BVJ6 771 aaKnown RBP13.06□□□□□ -0.32
ATF3-211ENST00000613954 DBNLQ9UJU6 430 aaKnown RBP13.06□□□□□ -0.32
ATF3-211ENST00000613954 CCNL1Q9UK58 526 aaPredicted RBP13.06□□□□□ -0.32
ATF3-211ENST00000613954 SH3TC1Q8TE82 1336 aa13.06□□□□□ -0.32
ATF3-211ENST00000613954 PFKFB2O60825 505 aa13.06□□□□□ -0.32
ATF3-211ENST00000613954 TUBB4AP04350 444 aa13.06□□□□□ -0.32
ATF3-211ENST00000613954 KCNQ4P56696 695 aa13.06□□□□□ -0.32
ATF3-211ENST00000613954 SLFNL1Q499Z3 407 aa13.06□□□□□ -0.32
ATF3-211ENST00000613954 SUSD4Q5VX71 490 aa13.06□□□□□ -0.32
ATF3-211ENST00000613954 TICAM2Q86XR7 235 aa13.06□□□□□ -0.32
ATF3-211ENST00000613954 CCAR1Q8IX12 1150 aaKnown RBP13.06□□□□□ -0.32
ATF3-211ENST00000613954 CEP57L1Q8IYX8 460 aa13.06□□□□□ -0.32
ATF3-211ENST00000613954 LY75O60449 1722 aa13.05□□□□□ -0.32
ATF3-211ENST00000613954 MYH3P11055 1940 aa13.05□□□□□ -0.32
ATF3-211ENST00000613954 FAM193AP78312 1265 aa13.05□□□□□ -0.32
ATF3-211ENST00000613954 FAM160A1Q05DH4 1040 aa13.05□□□□□ -0.32
ATF3-211ENST00000613954 COL9A3Q14050 684 aaPredicted RBP13.05□□□□□ -0.32
ATF3-211ENST00000613954 KIF18AQ8NI77 898 aa13.05□□□□□ -0.32
ATF3-211ENST00000613954 ZNF592Q92610 1267 aa13.05□□□□□ -0.32
ATF3-211ENST00000613954 PUS3Q9BZE2 481 aaKnown RBP13.05□□□□□ -0.32
ATF3-211ENST00000613954 BCL11BQ9C0K0 894 aaPredicted RBP13.05□□□□□ -0.32
ATF3-211ENST00000613954 CEP126Q9P2H0 1117 aa13.05□□□□□ -0.32
ATF3-211ENST00000613954 IMPACTQ9P2X3 320 aa13.05□□□□□ -0.32
ATF3-211ENST00000613954 NIP7Q9Y221 180 aaKnown RBP eCLIP13.05□□□□□ -0.32
ATF3-211ENST00000613954 TAF6LQ9Y6J9 622 aa13.05□□□□□ -0.32
ATF3-211ENST00000613954 ZNF609O15014 1411 aa13.05□□□□□ -0.32
ATF3-211ENST00000613954 ANKRD18BA2A2Z9 1011 aa13.05□□□□□ -0.32
ATF3-211ENST00000613954 CCDC69A6NI79 296 aa13.05□□□□□ -0.32
ATF3-211ENST00000613954 RPS6KA4O75676 772 aa13.05□□□□□ -0.32
ATF3-211ENST00000613954 ITGA6P23229 1130 aa13.05□□□□□ -0.32
ATF3-211ENST00000613954 MCMDC2Q4G0Z9 681 aa13.05□□□□□ -0.32
ATF3-211ENST00000613954 C11orf57Q6ZUT1 292 aaPredicted RBP13.05□□□□□ -0.32
ATF3-211ENST00000613954 ZNF771Q7L3S4 317 aaPredicted RBP13.05□□□□□ -0.32
ATF3-211ENST00000613954 KRT222Q8N1A0 295 aa13.05□□□□□ -0.32
ATF3-211ENST00000613954 CCDC85AQ96PX6 553 aaPredicted RBP13.05□□□□□ -0.32
ATF3-211ENST00000613954 DBNDD2Q9BQY9 259 aa13.05□□□□□ -0.32
ATF3-211ENST00000613954 GREM2Q9H772 168 aa13.05□□□□□ -0.32
ATF3-211ENST00000613954 ADD1P35611 737 aaKnown RBP13.04□□□□□ -0.32
ATF3-211ENST00000613954 SCRN1Q12765 414 aa13.04□□□□□ -0.32
ATF3-211ENST00000613954 SCN7AQ01118 1682 aa13.04□□□□□ -0.32
ATF3-211ENST00000613954 NRDCO43847 1150 aa13.03□□□□□ -0.32
ATF3-211ENST00000613954 NTSR2O95665 410 aa13.03□□□□□ -0.32
ATF3-211ENST00000613954 CCZ1BP86790 482 aa13.03□□□□□ -0.32
ATF3-211ENST00000613954 CCZ1P86791 482 aaPredicted RBP13.03□□□□□ -0.32
ATF3-211ENST00000613954 SNW1Q13573 536 aaKnown RBP13.03□□□□□ -0.32
ATF3-211ENST00000613954 FAM196AQ6ZSG2 479 aa13.03□□□□□ -0.32
ATF3-211ENST00000613954 DHX40Q8IX18 779 aaKnown RBP13.03□□□□□ -0.32
ATF3-211ENST00000613954 CCAR2Q8N163 923 aaKnown RBP13.03□□□□□ -0.32
ATF3-211ENST00000613954 OSBPL5Q9H0X9 879 aaPredicted RBP13.03□□□□□ -0.32
ATF3-211ENST00000613954 AKAP2Q9Y2D5 859 aa13.03□□□□□ -0.32
ATF3-211ENST00000613954 SLU7O95391 586 aaKnown RBP13.03□□□□□ -0.32
ATF3-211ENST00000613954 CYP21A2P08686 494 aa13.03□□□□□ -0.32
ATF3-211ENST00000613954 KCNJ6P48051 423 aa13.03□□□□□ -0.32
ATF3-211ENST00000613954 DHX32Q7L7V1 743 aaKnown RBP13.03□□□□□ -0.32
ATF3-211ENST00000613954 KRT27Q7Z3Y8 459 aa13.03□□□□□ -0.32
ATF3-211ENST00000613954 CREBRFQ8IUR6 639 aa13.03□□□□□ -0.32
ATF3-211ENST00000613954 NSUN7Q8NE18 718 aaKnown RBP13.03□□□□□ -0.32
ATF3-211ENST00000613954 ENGASEQ8NFI3 743 aa13.03□□□□□ -0.32
ATF3-211ENST00000613954 DDX11Q96FC9 970 aa13.03□□□□□ -0.32
ATF3-211ENST00000613954 NEUROD6Q96NK8 337 aa13.03□□□□□ -0.32
ATF3-211ENST00000613954 LAMB2P55268 1798 aa13.02□□□□□ -0.33
ATF3-211ENST00000613954 GNPATO15228 680 aa13.02□□□□□ -0.33
ATF3-211ENST00000613954 FILIP1Q7Z7B0 1213 aa13.02□□□□□ -0.33
ATF3-211ENST00000613954 CCDC150Q8NCX0 1101 aa13.02□□□□□ -0.33
ATF3-211ENST00000613954 NARFQ9UHQ1 456 aa13.02□□□□□ -0.33
ATF3-211ENST00000613954 ZNF215Q9UL58 517 aaPredicted RBP13.02□□□□□ -0.33
ATF3-211ENST00000613954 TAF1LQ8IZX4 1826 aa13.02□□□□□ -0.33
ATF3-211ENST00000613954 A0A1B0GUL7 405 aa13.01□□□□□ -0.33
ATF3-211ENST00000613954 TIMM10P62072 90 aa13.01□□□□□ -0.33
ATF3-211ENST00000613954 TPM4P67936 248 aa13.01□□□□□ -0.33
ATF3-211ENST00000613954 ZRSR1Q15695 479 aaKnown RBP13.01□□□□□ -0.33
ATF3-211ENST00000613954 ZNF772Q68DY9 489 aaPredicted RBP13.01□□□□□ -0.33
ATF3-211ENST00000613954 LDHAL6AQ6ZMR3 332 aa13.01□□□□□ -0.33
ATF3-211ENST00000613954 HAUS7Q99871 368 aa13.01□□□□□ -0.33
ATF3-211ENST00000613954 BPIFA3Q9BQP9 254 aa13.01□□□□□ -0.33
ATF3-211ENST00000613954 AGXT2Q9BYV1 514 aa13.01□□□□□ -0.33
ATF3-211ENST00000613954 RTCBQ9Y3I0 505 aaKnown RBP13.01□□□□□ -0.33
ATF3-211ENST00000613954 RIPOR2Q9Y4F9 1068 aa13.01□□□□□ -0.33
ATF3-211ENST00000613954 PTPDC1A2A3K4 754 aa13.01□□□□□ -0.33
ATF3-211ENST00000613954 CEBPZQ03701 1054 aaKnown RBP13.01□□□□□ -0.33
ATF3-211ENST00000613954 FSIP1Q8NA03 581 aa13.01□□□□□ -0.33
ATF3-211ENST00000613954 MRPS27Q92552 414 aaKnown RBP13.01□□□□□ -0.33
ATF3-211ENST00000613954 USP28Q96RU2 1077 aa13.01□□□□□ -0.33
ATF3-211ENST00000613954 GOLPH3LQ9H4A5 285 aa13.01□□□□□ -0.33
ATF3-211ENST00000613954 RIC1Q4ADV7 1423 aa13.01□□□□□ -0.33
ATF3-211ENST00000613954 LRP5O75197 1615 aa13.01□□□□□ -0.33
ATF3-211ENST00000613954 DDX60Q8IY21 1712 aaKnown RBP13.01□□□□□ -0.33
ATF3-211ENST00000613954 LAMA4Q16363 1823 aa13□□□□□ -0.33
ATF3-211ENST00000613954 BRWD3Q6RI45 1802 aa13□□□□□ -0.33
ATF3-211ENST00000613954 C4BP0C0L5 1744 aa13□□□□□ -0.33
ATF3-211ENST00000613954 RTL9Q8NET4 1388 aa13□□□□□ -0.33
ATF3-211ENST00000613954 A0A1W2PQ27 194 aa13□□□□□ -0.33
ATF3-211ENST00000613954 A0A1W2PQ64 194 aa13□□□□□ -0.33
ATF3-211ENST00000613954 A0A1W2PQD8 194 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms