RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 SCAF8Q9UPN6 1271 aaKnown RBP13.93□□□□□ -0.18
SLIRP-212ENST00000613856 H7C1D1 291 aa13.92□□□□□ -0.18
SLIRP-212ENST00000613856 RIMBP2O15034 1052 aa13.92□□□□□ -0.18
SLIRP-212ENST00000613856 SLC10A3P09131 477 aa13.92□□□□□ -0.18
SLIRP-212ENST00000613856 IFIT1P09914 478 aaKnown RBP13.92□□□□□ -0.18
SLIRP-212ENST00000613856 TIMM10P62072 90 aa13.92□□□□□ -0.18
SLIRP-212ENST00000613856 C8orf34Q49A92 452 aa13.92□□□□□ -0.18
SLIRP-212ENST00000613856 PRPF38BQ5VTL8 546 aaKnown RBP13.92□□□□□ -0.18
SLIRP-212ENST00000613856 HELBQ8NG08 1087 aaPredicted RBP13.92□□□□□ -0.18
SLIRP-212ENST00000613856 ZNF512BQ96KM6 892 aaPredicted RBP13.92□□□□□ -0.18
SLIRP-212ENST00000613856 NEUROD6Q96NK8 337 aa13.92□□□□□ -0.18
SLIRP-212ENST00000613856 MYH7P12883 1935 aa13.92□□□□□ -0.18
SLIRP-212ENST00000613856 XDHP47989 1333 aa13.91□□□□□ -0.18
SLIRP-212ENST00000613856 TAF5LO75529 589 aa13.91□□□□□ -0.18
SLIRP-212ENST00000613856 SDSP20132 328 aa13.91□□□□□ -0.18
SLIRP-212ENST00000613856 ADORA1P30542 326 aa13.91□□□□□ -0.18
SLIRP-212ENST00000613856 DOK7Q18PE1 504 aa13.91□□□□□ -0.18
SLIRP-212ENST00000613856 SAGE1Q9NXZ1 904 aa13.91□□□□□ -0.18
SLIRP-212ENST00000613856 HPS5Q9UPZ3 1129 aa13.91□□□□□ -0.18
SLIRP-212ENST00000613856 DOCK2Q92608 1830 aa13.91□□□□□ -0.18
SLIRP-212ENST00000613856 ZBTB22O15209 634 aa13.9□□□□□ -0.18
SLIRP-212ENST00000613856 CCDC158Q5M9N0 1113 aa13.9□□□□□ -0.18
SLIRP-212ENST00000613856 MOB2Q70IA6 237 aa13.9□□□□□ -0.18
SLIRP-212ENST00000613856 RASAL3Q86YV0 1011 aa13.9□□□□□ -0.18
SLIRP-212ENST00000613856 C2orf69Q8N8R5 385 aa13.9□□□□□ -0.18
SLIRP-212ENST00000613856 TMX4Q9H1E5 349 aaPredicted RBP13.9□□□□□ -0.18
SLIRP-212ENST00000613856 GGA3Q9NZ52 723 aa13.9□□□□□ -0.18
SLIRP-212ENST00000613856 PODXL2Q9NZ53 605 aa13.9□□□□□ -0.18
SLIRP-212ENST00000613856 POLLQ9UGP5 575 aa13.9□□□□□ -0.18
SLIRP-212ENST00000613856 LEMD3Q9Y2U8 911 aa13.9□□□□□ -0.18
SLIRP-212ENST00000613856 RFX7Q2KHR2 1363 aa13.9□□□□□ -0.18
SLIRP-212ENST00000613856 HTTP42858 3142 aa13.9□□□□□ -0.18
SLIRP-212ENST00000613856 ZNF804BA4D1E1 1349 aa13.9□□□□□ -0.19
SLIRP-212ENST00000613856 IRS2Q9Y4H2 1338 aa13.9□□□□□ -0.19
SLIRP-212ENST00000613856 CDC45O75419 566 aa13.89□□□□□ -0.19
SLIRP-212ENST00000613856 ARID4AP29374 1257 aaPredicted RBP13.89□□□□□ -0.19
SLIRP-212ENST00000613856 GPSM2P81274 684 aa13.89□□□□□ -0.19
SLIRP-212ENST00000613856 KIF4BQ2VIQ3 1234 aa13.89□□□□□ -0.19
SLIRP-212ENST00000613856 GORABQ5T7V8 394 aa13.89□□□□□ -0.19
SLIRP-212ENST00000613856 C15orf52Q6ZUT6 534 aaKnown RBP13.89□□□□□ -0.19
SLIRP-212ENST00000613856 CTU1Q7Z7A3 348 aaKnown RBP13.89□□□□□ -0.19
SLIRP-212ENST00000613856 HAUS7Q99871 368 aa13.89□□□□□ -0.19
SLIRP-212ENST00000613856 BACH2Q9BYV9 841 aa13.89□□□□□ -0.19
SLIRP-212ENST00000613856 PSME4Q14997 1843 aa13.89□□□□□ -0.19
SLIRP-212ENST00000613856 CENPFP49454 3210 aa13.89□□□□□ -0.19
SLIRP-212ENST00000613856 ECE2O60344 883 aa13.88□□□□□ -0.19
SLIRP-212ENST00000613856 UQCRFS1P1P0C7P4 283 aa13.88□□□□□ -0.19
SLIRP-212ENST00000613856 WASHC4Q2M389 1173 aa13.88□□□□□ -0.19
SLIRP-212ENST00000613856 TTC39AQ5SRH9 613 aa13.88□□□□□ -0.19
SLIRP-212ENST00000613856 CCDC102BQ68D86 513 aa13.88□□□□□ -0.19
SLIRP-212ENST00000613856 TICAM2Q86XR7 235 aa13.88□□□□□ -0.19
SLIRP-212ENST00000613856 DPF2Q92785 391 aa13.88□□□□□ -0.19
SLIRP-212ENST00000613856 CCDC102AQ96A19 550 aa13.88□□□□□ -0.19
SLIRP-212ENST00000613856 DCPSQ96C86 337 aaKnown RBP13.88□□□□□ -0.19
SLIRP-212ENST00000613856 EVI5LQ96CN4 794 aa13.88□□□□□ -0.19
SLIRP-212ENST00000613856 CDCA5Q96FF9 252 aa13.88□□□□□ -0.19
SLIRP-212ENST00000613856 NSFL1CQ9UNZ2 370 aaKnown RBP13.88□□□□□ -0.19
SLIRP-212ENST00000613856 PAPPA2Q9BXP8 1791 aa13.87□□□□□ -0.19
SLIRP-212ENST00000613856 BRCA2P51587 3418 aa13.87□□□□□ -0.19
SLIRP-212ENST00000613856 TRIM6-TRIM34B2RNG4 842 aa13.87□□□□□ -0.19
SLIRP-212ENST00000613856 SNAP23O00161 211 aa13.87□□□□□ -0.19
SLIRP-212ENST00000613856 TBC1D8O95759 1140 aa13.87□□□□□ -0.19
SLIRP-212ENST00000613856 ATP2B4P23634 1241 aa13.87□□□□□ -0.19
SLIRP-212ENST00000613856 KCNJ4P48050 445 aa13.87□□□□□ -0.19
SLIRP-212ENST00000613856 BOLA2Q9H3K6 86 aa13.87□□□□□ -0.19
SLIRP-212ENST00000613856 ANKIB1Q9P2G1 1089 aa13.87□□□□□ -0.19
SLIRP-212ENST00000613856 ZNF646O15015 1829 aaPredicted RBP13.87□□□□□ -0.19
SLIRP-212ENST00000613856 MED23Q9ULK4 1368 aa13.86□□□□□ -0.19
SLIRP-212ENST00000613856 PHKA1P46020 1223 aa13.86□□□□□ -0.19
SLIRP-212ENST00000613856 PRAMEF18Q5VWM3 479 aa13.86□□□□□ -0.19
SLIRP-212ENST00000613856 TBC1D9Q6ZT07 1266 aa13.86□□□□□ -0.19
SLIRP-212ENST00000613856 ZNF296Q8WUU4 475 aaPredicted RBP13.86□□□□□ -0.19
SLIRP-212ENST00000613856 GGA1Q9UJY5 639 aa13.86□□□□□ -0.19
SLIRP-212ENST00000613856 MYO5AQ9Y4I1 1855 aaKnown RBP13.86□□□□□ -0.19
SLIRP-212ENST00000613856 PDS5AQ29RF7 1337 aaKnown RBP13.86□□□□□ -0.19
SLIRP-212ENST00000613856 MAST2Q6P0Q8 1798 aa13.86□□□□□ -0.19
SLIRP-212ENST00000613856 C6orf229H3BNL8 230 aa13.85□□□□□ -0.19
SLIRP-212ENST00000613856 SEMA3EO15041 775 aa13.85□□□□□ -0.19
SLIRP-212ENST00000613856 EIF5BO60841 1220 aaKnown RBP13.85□□□□□ -0.19
SLIRP-212ENST00000613856 CAVIN4Q5BKX8 364 aa13.85□□□□□ -0.19
SLIRP-212ENST00000613856 ANGEL2Q5VTE6 544 aaKnown RBP13.85□□□□□ -0.19
SLIRP-212ENST00000613856 CASC1Q6TDU7 716 aa13.85□□□□□ -0.19
SLIRP-212ENST00000613856 FBXO33Q7Z6M2 555 aa13.85□□□□□ -0.19
SLIRP-212ENST00000613856 RILPL2Q969X0 211 aa13.85□□□□□ -0.19
SLIRP-212ENST00000613856 R3HDMLQ9H3Y0 253 aa13.85□□□□□ -0.19
SLIRP-212ENST00000613856 UFL1O94874 794 aa13.84□□□□□ -0.19
SLIRP-212ENST00000613856 MCAMP43121 646 aa13.84□□□□□ -0.19
SLIRP-212ENST00000613856 MKRN3Q13064 507 aaKnown RBP13.84□□□□□ -0.19
SLIRP-212ENST00000613856 SCARF1Q14162 830 aa13.84□□□□□ -0.19
SLIRP-212ENST00000613856 SULF1Q8IWU6 871 aa13.84□□□□□ -0.19
SLIRP-212ENST00000613856 TBC1D16Q8TBP0 767 aa13.84□□□□□ -0.19
SLIRP-212ENST00000613856 FAM84BQ96KN1 310 aaPredicted RBP13.84□□□□□ -0.19
SLIRP-212ENST00000613856 GNL3LQ9NVN8 582 aaKnown RBP13.84□□□□□ -0.19
SLIRP-212ENST00000613856 PAG1Q9NWQ8 432 aa13.84□□□□□ -0.19
SLIRP-212ENST00000613856 COL1A1P02452 1464 aaPredicted RBP13.84□□□□□ -0.19
SLIRP-212ENST00000613856 WTIPA6NIX2 430 aaPredicted RBP13.83□□□□□ -0.2
SLIRP-212ENST00000613856 HIP1O00291 1037 aa13.83□□□□□ -0.2
SLIRP-212ENST00000613856 MAP4K4O95819 1239 aaPredicted RBP13.83□□□□□ -0.2
SLIRP-212ENST00000613856 CHMLP26374 656 aa13.83□□□□□ -0.2
SLIRP-212ENST00000613856 KLRK1P26718 216 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms