RNA–Protein interactions for RNA: ENST00000613444.4

USP39-220, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-220ENST00000613444 GRIK5Q16478 980 aa17.08■□□□□ 0.32
USP39-220ENST00000613444 EYA3Q99504 573 aa17.08■□□□□ 0.32
USP39-220ENST00000613444 CYP21A2P08686 494 aa17.07■□□□□ 0.32
USP39-220ENST00000613444 ADCK5Q3MIX3 580 aa17.07■□□□□ 0.32
USP39-220ENST00000613444 RPAP1Q9BWH6 1393 aaPredicted RBP17.07■□□□□ 0.32
USP39-220ENST00000613444 IGSF3O75054 1194 aa17.06■□□□□ 0.32
USP39-220ENST00000613444 MBD4O95243 580 aa17.06■□□□□ 0.32
USP39-220ENST00000613444 BECN1Q14457 450 aa17.06■□□□□ 0.32
USP39-220ENST00000613444 ZGPATQ8N5A5 531 aaKnown RBP17.06■□□□□ 0.32
USP39-220ENST00000613444 AIDAQ96BJ3 306 aa17.06■□□□□ 0.32
USP39-220ENST00000613444 CD2APQ9Y5K6 639 aa17.06■□□□□ 0.32
USP39-220ENST00000613444 NAA16Q6N069 864 aaPredicted RBP17.06■□□□□ 0.32
USP39-220ENST00000613444 TMED8Q6PL24 325 aaPredicted RBP17.06■□□□□ 0.32
USP39-220ENST00000613444 LCORLQ8N3X6 602 aa17.06■□□□□ 0.32
USP39-220ENST00000613444 RIOK1Q9BRS2 568 aaKnown RBP17.06■□□□□ 0.32
USP39-220ENST00000613444 FER1L6Q2WGJ9 1857 aa17.06■□□□□ 0.32
USP39-220ENST00000613444 FGAP02671 866 aa17.05■□□□□ 0.32
USP39-220ENST00000613444 ZKSCAN1P17029 563 aaPredicted RBP17.05■□□□□ 0.32
USP39-220ENST00000613444 COL9A3Q14050 684 aaPredicted RBP17.05■□□□□ 0.32
USP39-220ENST00000613444 DOK7Q18PE1 504 aa17.05■□□□□ 0.32
USP39-220ENST00000613444 GRIPAP1Q4V328 841 aa17.05■□□□□ 0.32
USP39-220ENST00000613444 RNF20Q5VTR2 975 aa17.05■□□□□ 0.32
USP39-220ENST00000613444 SPTY2D1Q68D10 685 aaPredicted RBP17.05■□□□□ 0.32
USP39-220ENST00000613444 TM6SF1Q9BZW5 370 aa17.05■□□□□ 0.32
USP39-220ENST00000613444 ARMT1Q9H993 441 aa17.05■□□□□ 0.32
USP39-220ENST00000613444 PIM2Q9P1W9 311 aa17.05■□□□□ 0.32
USP39-220ENST00000613444 NEK4P51957 841 aa17.05■□□□□ 0.32
USP39-220ENST00000613444 CCDC93Q567U6 631 aa17.05■□□□□ 0.32
USP39-220ENST00000613444 TTLL5Q6EMB2 1281 aa17.05■□□□□ 0.32
USP39-220ENST00000613444 MIGA1Q8NAN2 632 aa17.05■□□□□ 0.32
USP39-220ENST00000613444 UPF3BQ9BZI7 483 aaKnown RBP17.05■□□□□ 0.32
USP39-220ENST00000613444 PSME4Q14997 1843 aa17.05■□□□□ 0.32
USP39-220ENST00000613444 LDHBP07195 334 aaKnown RBP17.04■□□□□ 0.32
USP39-220ENST00000613444 GTF2IP78347 998 aa17.04■□□□□ 0.32
USP39-220ENST00000613444 KIAA2012Q0VF49 1180 aa17.04■□□□□ 0.32
USP39-220ENST00000613444 TTC14Q96N46 770 aa17.04■□□□□ 0.32
USP39-220ENST00000613444 PSMD1Q99460 953 aa17.04■□□□□ 0.32
USP39-220ENST00000613444 ZSWIM6Q9HCJ5 1215 aa17.04■□□□□ 0.32
USP39-220ENST00000613444 EPB41L4AQ9HCS5 686 aaPredicted RBP17.04■□□□□ 0.32
USP39-220ENST00000613444 BAZ2AQ9UIF9 1905 aaKnown RBP17.03■□□□□ 0.32
USP39-220ENST00000613444 GSG1L2A8MUP6 293 aa17.03■□□□□ 0.32
USP39-220ENST00000613444 PATL2C9JE40 543 aaKnown RBP17.03■□□□□ 0.32
USP39-220ENST00000613444 ALX1Q15699 326 aa17.03■□□□□ 0.32
USP39-220ENST00000613444 MFSD14BQ5SR56 506 aa17.03■□□□□ 0.32
USP39-220ENST00000613444 PODNQ7Z5L7 613 aa17.03■□□□□ 0.32
USP39-220ENST00000613444 HSCBQ8IWL3 235 aa17.03■□□□□ 0.32
USP39-220ENST00000613444 RTKN2Q8IZC4 609 aa17.03■□□□□ 0.32
USP39-220ENST00000613444 TBC1D22AQ8WUA7 517 aa17.03■□□□□ 0.32
USP39-220ENST00000613444 JAKMIP1Q96N16 626 aaKnown RBP17.03■□□□□ 0.32
USP39-220ENST00000613444 DBNDD1Q9H9R9 158 aa17.03■□□□□ 0.32
USP39-220ENST00000613444 CDK5RAP2Q96SN8 1893 aa17.03■□□□□ 0.32
USP39-220ENST00000613444 ZMYM6O95789 1325 aa17.02■□□□□ 0.32
USP39-220ENST00000613444 MAGEB6P1A0A0J9YX57 407 aa17.02■□□□□ 0.32
USP39-220ENST00000613444 PRKAB2O43741 272 aa17.02■□□□□ 0.32
USP39-220ENST00000613444 ST18O60284 1047 aa17.02■□□□□ 0.32
USP39-220ENST00000613444 AOC3Q16853 763 aa17.02■□□□□ 0.32
USP39-220ENST00000613444 STOX1Q6ZVD7 989 aa17.02■□□□□ 0.32
USP39-220ENST00000613444 SUPT20HQ8NEM7 779 aa17.02■□□□□ 0.32
USP39-220ENST00000613444 CPA1P15085 419 aa17.02■□□□□ 0.31
USP39-220ENST00000613444 CASTP20810 708 aaKnown RBP17.02■□□□□ 0.31
USP39-220ENST00000613444 DYNLL1P63167 89 aaKnown RBP17.02■□□□□ 0.31
USP39-220ENST00000613444 DZIP1Q86YF9 867 aaKnown RBP17.02■□□□□ 0.31
USP39-220ENST00000613444 CERS5Q8N5B7 392 aa17.02■□□□□ 0.31
USP39-220ENST00000613444 KCNQ5Q9NR82 932 aa17.02■□□□□ 0.31
USP39-220ENST00000613444 PPP1R1BQ9UD71 204 aaPredicted RBP17.02■□□□□ 0.31
USP39-220ENST00000613444 CTNNA3Q9UI47 895 aa17.02■□□□□ 0.31
USP39-220ENST00000613444 ARFGEF1Q9Y6D6 1849 aa17.02■□□□□ 0.31
USP39-220ENST00000613444 COL4A5P29400 1685 aa17.01■□□□□ 0.31
USP39-220ENST00000613444 K7ELQ4 463 aaPredicted RBP17.01■□□□□ 0.31
USP39-220ENST00000613444 GNAT2P19087 354 aa17.01■□□□□ 0.31
USP39-220ENST00000613444 DALRD3Q5D0E6 543 aaKnown RBP17.01■□□□□ 0.31
USP39-220ENST00000613444 IFNL3Q8IZI9 196 aa17.01■□□□□ 0.31
USP39-220ENST00000613444 IL27Q8NEV9 243 aa17.01■□□□□ 0.31
USP39-220ENST00000613444 ECE2O60344 883 aa17.01■□□□□ 0.31
USP39-220ENST00000613444 DIXDC1Q155Q3 683 aa17.01■□□□□ 0.31
USP39-220ENST00000613444 NBPF3Q9H094 633 aa17.01■□□□□ 0.31
USP39-220ENST00000613444 KRT32Q14532 448 aa17■□□□□ 0.31
USP39-220ENST00000613444 RUFY3Q7L099 469 aa17■□□□□ 0.31
USP39-220ENST00000613444 SLC4A4Q9Y6R1 1079 aa17■□□□□ 0.31
USP39-220ENST00000613444 SOGA3Q5TF21 947 aa16.99■□□□□ 0.31
USP39-220ENST00000613444 SPON1Q9HCB6 807 aa16.99■□□□□ 0.31
USP39-220ENST00000613444 AATFQ9NY61 560 aaKnown RBP eCLIP16.99■□□□□ 0.31
USP39-220ENST00000613444 DAXXQ9UER7 740 aaPredicted RBP16.99■□□□□ 0.31
USP39-220ENST00000613444 SUGT1Q9Y2Z0 365 aa16.99■□□□□ 0.31
USP39-220ENST00000613444 APPP05067 770 aa16.99■□□□□ 0.31
USP39-220ENST00000613444 PSMA5P28066 241 aa16.99■□□□□ 0.31
USP39-220ENST00000613444 IMMTQ16891 758 aaKnown RBP16.99■□□□□ 0.31
USP39-220ENST00000613444 FAM163AQ96GL9 167 aaPredicted RBP16.99■□□□□ 0.31
USP39-220ENST00000613444 MXD3Q9BW11 206 aa16.99■□□□□ 0.31
USP39-220ENST00000613444 TIAM2Q8IVF5 1701 aa16.98■□□□□ 0.31
USP39-220ENST00000613444 MROH7-TTC4A0A0A0MT08 1334 aa16.98■□□□□ 0.31
USP39-220ENST00000613444 YDJCA8MPS7 323 aa16.98■□□□□ 0.31
USP39-220ENST00000613444 E7EWF7 191 aa16.98■□□□□ 0.31
USP39-220ENST00000613444 G3V3G9 751 aa16.98■□□□□ 0.31
USP39-220ENST00000613444 PPIP5K2O43314 1243 aa16.98■□□□□ 0.31
USP39-220ENST00000613444 HAND2P61296 217 aa16.98■□□□□ 0.31
USP39-220ENST00000613444 GSTO1P78417 241 aa16.98■□□□□ 0.31
USP39-220ENST00000613444 DCAF8Q5TAQ9 597 aa16.98■□□□□ 0.31
USP39-220ENST00000613444 KLHL34Q8N239 644 aa16.98■□□□□ 0.31
USP39-220ENST00000613444 NLGN2Q8NFZ4 835 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms