RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 PDCP20941 246 aa19.28■□□□□ 0.68
CNOT3-208ENST00000613073 IGHMBP2P38935 993 aaKnown RBP19.28■□□□□ 0.68
CNOT3-208ENST00000613073 IMMTQ16891 758 aaKnown RBP19.28■□□□□ 0.68
CNOT3-208ENST00000613073 TAF3Q5VWG9 929 aa19.28■□□□□ 0.68
CNOT3-208ENST00000613073 GPHNQ9NQX3 736 aaPredicted RBP19.28■□□□□ 0.68
CNOT3-208ENST00000613073 WWC3Q9ULE0 1092 aa19.28■□□□□ 0.68
CNOT3-208ENST00000613073 ZNF652Q9Y2D9 606 aa19.28■□□□□ 0.68
CNOT3-208ENST00000613073 ABCC12Q96J65 1359 aa19.28■□□□□ 0.68
CNOT3-208ENST00000613073 MYO5AQ9Y4I1 1855 aaKnown RBP19.28■□□□□ 0.68
CNOT3-208ENST00000613073 SLC5A1P13866 664 aa19.27■□□□□ 0.68
CNOT3-208ENST00000613073 FOSBP53539 338 aa19.27■□□□□ 0.68
CNOT3-208ENST00000613073 ERFEQ4G0M1 354 aa19.27■□□□□ 0.68
CNOT3-208ENST00000613073 ZNF512BQ96KM6 892 aaPredicted RBP19.27■□□□□ 0.68
CNOT3-208ENST00000613073 USP21Q9UK80 565 aa19.27■□□□□ 0.68
CNOT3-208ENST00000613073 ZNF532Q9HCE3 1301 aa19.27■□□□□ 0.68
CNOT3-208ENST00000613073 ARID4AP29374 1257 aaPredicted RBP19.27■□□□□ 0.68
CNOT3-208ENST00000613073 TTF1Q15361 905 aaPredicted RBP19.27■□□□□ 0.68
CNOT3-208ENST00000613073 TMEM87AQ8NBN3 555 aa19.27■□□□□ 0.68
CNOT3-208ENST00000613073 ZNF592Q92610 1267 aa19.27■□□□□ 0.68
CNOT3-208ENST00000613073 NCOA5Q9HCD5 579 aaKnown RBP19.27■□□□□ 0.68
CNOT3-208ENST00000613073 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.27■□□□□ 0.68
CNOT3-208ENST00000613073 V9GYY5 206 aaPredicted RBP19.27■□□□□ 0.68
CNOT3-208ENST00000613073 EP400Q96L91 3159 aa19.27■□□□□ 0.68
CNOT3-208ENST00000613073 APPP05067 770 aa19.27■□□□□ 0.67
CNOT3-208ENST00000613073 SLFN14P0C7P3 912 aa19.27■□□□□ 0.67
CNOT3-208ENST00000613073 BCAMP50895 628 aa19.27■□□□□ 0.67
CNOT3-208ENST00000613073 IRX5P78411 483 aaPredicted RBP19.27■□□□□ 0.67
CNOT3-208ENST00000613073 RASGRF1Q13972 1273 aa19.27■□□□□ 0.67
CNOT3-208ENST00000613073 C3orf67Q6ZVT6 689 aa19.27■□□□□ 0.67
CNOT3-208ENST00000613073 TRERF1Q96PN7 1200 aa19.27■□□□□ 0.67
CNOT3-208ENST00000613073 UQCRFS1P1P0C7P4 283 aa19.26■□□□□ 0.67
CNOT3-208ENST00000613073 SPATA5Q8NB90 893 aa19.26■□□□□ 0.67
CNOT3-208ENST00000613073 ZSCAN25Q6NSZ9 544 aa19.26■□□□□ 0.67
CNOT3-208ENST00000613073 PDE6AP16499 860 aa19.25■□□□□ 0.67
CNOT3-208ENST00000613073 ZNF213O14771 459 aa19.25■□□□□ 0.67
CNOT3-208ENST00000613073 CHRNDQ07001 517 aa19.25■□□□□ 0.67
CNOT3-208ENST00000613073 DRC7Q8IY82 874 aa19.25■□□□□ 0.67
CNOT3-208ENST00000613073 IQSEC3Q9UPP2 1182 aaPredicted RBP19.25■□□□□ 0.67
CNOT3-208ENST00000613073 MYH7P12883 1935 aa19.25■□□□□ 0.67
CNOT3-208ENST00000613073 WTIPA6NIX2 430 aaPredicted RBP19.24■□□□□ 0.67
CNOT3-208ENST00000613073 PFKFB2O60825 505 aa19.24■□□□□ 0.67
CNOT3-208ENST00000613073 UBE2HP62256 183 aa19.24■□□□□ 0.67
CNOT3-208ENST00000613073 DDX60Q8IY21 1712 aaKnown RBP19.24■□□□□ 0.67
CNOT3-208ENST00000613073 CCDC186Q7Z3E2 898 aa19.24■□□□□ 0.67
CNOT3-208ENST00000613073 CCDC24Q8N4L8 307 aa19.24■□□□□ 0.67
CNOT3-208ENST00000613073 TFIP11Q9UBB9 837 aaKnown RBP19.24■□□□□ 0.67
CNOT3-208ENST00000613073 SRP68Q9UHB9 627 aaKnown RBP19.24■□□□□ 0.67
CNOT3-208ENST00000613073 DENND2AQ9ULE3 1009 aa19.24■□□□□ 0.67
CNOT3-208ENST00000613073 RREB1Q92766 1687 aa19.24■□□□□ 0.67
CNOT3-208ENST00000613073 TNNT1P13805 278 aa19.23■□□□□ 0.67
CNOT3-208ENST00000613073 TBC1D9BQ66K14 1250 aa19.23■□□□□ 0.67
CNOT3-208ENST00000613073 CLEC4GQ6UXB4 293 aa19.23■□□□□ 0.67
CNOT3-208ENST00000613073 FNBP4Q8N3X1 1017 aaPredicted RBP19.23■□□□□ 0.67
CNOT3-208ENST00000613073 NRBP1Q9UHY1 535 aa19.23■□□□□ 0.67
CNOT3-208ENST00000613073 DDX41Q9UJV9 622 aaKnown RBP19.23■□□□□ 0.67
CNOT3-208ENST00000613073 H3BQV1 296 aa19.23■□□□□ 0.67
CNOT3-208ENST00000613073 CTDNEP1O95476 244 aa19.23■□□□□ 0.67
CNOT3-208ENST00000613073 IFFO2Q5TF58 517 aa19.23■□□□□ 0.67
CNOT3-208ENST00000613073 RAB11FIP4Q86YS3 637 aa19.23■□□□□ 0.67
CNOT3-208ENST00000613073 MAGEB6Q8N7X4 407 aa19.23■□□□□ 0.67
CNOT3-208ENST00000613073 COL4A1P02462 1669 aa19.23■□□□□ 0.67
CNOT3-208ENST00000613073 GOLGA6L6A8MZA4 724 aa19.22■□□□□ 0.67
CNOT3-208ENST00000613073 PDIA3P30101 505 aaKnown RBP19.22■□□□□ 0.67
CNOT3-208ENST00000613073 GABPB1Q06547 395 aaPredicted RBP19.22■□□□□ 0.67
CNOT3-208ENST00000613073 UBE3CQ15386 1083 aa19.22■□□□□ 0.67
CNOT3-208ENST00000613073 AGXT2Q9BYV1 514 aa19.22■□□□□ 0.67
CNOT3-208ENST00000613073 LRP5O75197 1615 aa19.22■□□□□ 0.67
CNOT3-208ENST00000613073 NSUN7Q8NE18 718 aaKnown RBP19.22■□□□□ 0.67
CNOT3-208ENST00000613073 AIDAQ96BJ3 306 aa19.22■□□□□ 0.67
CNOT3-208ENST00000613073 ST7Q9NRC1 585 aa19.22■□□□□ 0.67
CNOT3-208ENST00000613073 GNPATO15228 680 aa19.21■□□□□ 0.67
CNOT3-208ENST00000613073 PRC1O43663 620 aa19.21■□□□□ 0.67
CNOT3-208ENST00000613073 COL5A3P25940 1745 aaPredicted RBP19.21■□□□□ 0.67
CNOT3-208ENST00000613073 KRT85P78386 507 aa19.21■□□□□ 0.67
CNOT3-208ENST00000613073 IPO4Q8TEX9 1081 aaKnown RBP19.21■□□□□ 0.67
CNOT3-208ENST00000613073 TCRBV5S4A2TA0A5A2 114 aa19.21■□□□□ 0.67
CNOT3-208ENST00000613073 PTPDC1A2A3K4 754 aa19.21■□□□□ 0.67
CNOT3-208ENST00000613073 CAMK4Q16566 473 aa19.21■□□□□ 0.67
CNOT3-208ENST00000613073 RALYLQ86SE5 291 aaKnown RBP19.21■□□□□ 0.67
CNOT3-208ENST00000613073 TTC6Q86TZ1 520 aa19.21■□□□□ 0.67
CNOT3-208ENST00000613073 LUZP1Q86V48 1076 aa19.21■□□□□ 0.67
CNOT3-208ENST00000613073 TAF1P21675 1872 aa19.21■□□□□ 0.67
CNOT3-208ENST00000613073 NKX2-3Q8TAU0 364 aa19.21■□□□□ 0.67
CNOT3-208ENST00000613073 CDC5LQ99459 802 aaKnown RBP19.21■□□□□ 0.67
CNOT3-208ENST00000613073 FUCA2Q9BTY2 467 aa19.21■□□□□ 0.67
CNOT3-208ENST00000613073 TERF2Q15554 542 aa19.2■□□□□ 0.66
CNOT3-208ENST00000613073 AMIGO3Q86WK7 504 aa19.2■□□□□ 0.66
CNOT3-208ENST00000613073 CCDC112Q8NEF3 446 aa19.2■□□□□ 0.66
CNOT3-208ENST00000613073 NCOA7Q8NI08 942 aa19.2■□□□□ 0.66
CNOT3-208ENST00000613073 SMARCC2Q8TAQ2 1214 aa19.2■□□□□ 0.66
CNOT3-208ENST00000613073 NBPF3Q9H094 633 aa19.2■□□□□ 0.66
CNOT3-208ENST00000613073 NPHP1O15259 732 aa19.2■□□□□ 0.66
CNOT3-208ENST00000613073 MAP3K12Q12852 859 aa19.2■□□□□ 0.66
CNOT3-208ENST00000613073 ANKRD18AQ8IVF6 992 aa19.2■□□□□ 0.66
CNOT3-208ENST00000613073 MB21D2Q8IYB1 491 aaPredicted RBP19.2■□□□□ 0.66
CNOT3-208ENST00000613073 CCNL1Q9UK58 526 aaPredicted RBP19.2■□□□□ 0.66
CNOT3-208ENST00000613073 ANTXR2P58335 489 aa19.19■□□□□ 0.66
CNOT3-208ENST00000613073 KIF18AQ8NI77 898 aa19.19■□□□□ 0.66
CNOT3-208ENST00000613073 CNTNAP4Q9C0A0 1308 aa19.19■□□□□ 0.66
CNOT3-208ENST00000613073 GYG1P46976 350 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms