RNA–Protein interactions for RNA: ENST00000612839.1

CCL3L3-201, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 1 (best)

Gene CCL3L3, Length 1,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-201ENST00000612839 DBNDD2Q9BQY9 259 aa13.93□□□□□ -0.18
CCL3L3-201ENST00000612839 IL1RAPL2Q9NP60 686 aa13.93□□□□□ -0.18
CCL3L3-201ENST00000612839 DBNLQ9UJU6 430 aaKnown RBP13.93□□□□□ -0.18
CCL3L3-201ENST00000612839 POLR2AP24928 1970 aaKnown RBP13.93□□□□□ -0.18
CCL3L3-201ENST00000612839 RAB11FIP3O75154 756 aa13.93□□□□□ -0.18
CCL3L3-201ENST00000612839 ITGBL1O95965 494 aaPredicted RBP13.93□□□□□ -0.18
CCL3L3-201ENST00000612839 MMP14P50281 582 aa13.93□□□□□ -0.18
CCL3L3-201ENST00000612839 ASTLQ6HA08 431 aaPredicted RBP13.93□□□□□ -0.18
CCL3L3-201ENST00000612839 CNTROBQ8N137 903 aa13.93□□□□□ -0.18
CCL3L3-201ENST00000612839 CCDC8Q9H0W5 538 aaPredicted RBP13.93□□□□□ -0.18
CCL3L3-201ENST00000612839 DCTPP1Q9H773 170 aa13.93□□□□□ -0.18
CCL3L3-201ENST00000612839 TLR7Q9NYK1 1049 aaKnown RBP13.93□□□□□ -0.18
CCL3L3-201ENST00000612839 HDAC9Q9UKV0 1011 aa13.93□□□□□ -0.18
CCL3L3-201ENST00000612839 DENND2AQ9ULE3 1009 aa13.93□□□□□ -0.18
CCL3L3-201ENST00000612839 AKAP11Q9UKA4 1901 aa13.92□□□□□ -0.18
CCL3L3-201ENST00000612839 WNT10BO00744 389 aa13.92□□□□□ -0.18
CCL3L3-201ENST00000612839 ARID4AP29374 1257 aaPredicted RBP13.92□□□□□ -0.18
CCL3L3-201ENST00000612839 AAMPQ13685 434 aa13.92□□□□□ -0.18
CCL3L3-201ENST00000612839 GORABQ5T7V8 394 aa13.92□□□□□ -0.18
CCL3L3-201ENST00000612839 WDR66Q8TBY9 1149 aa13.92□□□□□ -0.18
CCL3L3-201ENST00000612839 TTF2Q9UNY4 1162 aaKnown RBP13.92□□□□□ -0.18
CCL3L3-201ENST00000612839 ASTN2O75129 1339 aaPredicted RBP13.92□□□□□ -0.18
CCL3L3-201ENST00000612839 ECM29Q5VYK3 1845 aa13.91□□□□□ -0.18
CCL3L3-201ENST00000612839 IRX6P78412 446 aaPredicted RBP13.91□□□□□ -0.18
CCL3L3-201ENST00000612839 SCARF1Q14162 830 aa13.91□□□□□ -0.18
CCL3L3-201ENST00000612839 NBPF9Q3BBW0 867 aa13.91□□□□□ -0.18
CCL3L3-201ENST00000612839 PI16Q6UXB8 463 aa13.91□□□□□ -0.18
CCL3L3-201ENST00000612839 AACSQ86V21 672 aa13.91□□□□□ -0.18
CCL3L3-201ENST00000612839 ZBED3Q96IU2 234 aaPredicted RBP13.91□□□□□ -0.18
CCL3L3-201ENST00000612839 HMG20BQ9P0W2 317 aa13.91□□□□□ -0.18
CCL3L3-201ENST00000612839 PCDHAC2Q9Y5I4 1007 aa13.91□□□□□ -0.18
CCL3L3-201ENST00000612839 PDS5AQ29RF7 1337 aaKnown RBP13.91□□□□□ -0.18
CCL3L3-201ENST00000612839 PASKQ96RG2 1323 aa13.91□□□□□ -0.18
CCL3L3-201ENST00000612839 SALL1Q9NSC2 1324 aa13.91□□□□□ -0.18
CCL3L3-201ENST00000612839 CENPBP07199 599 aaPredicted RBP13.9□□□□□ -0.18
CCL3L3-201ENST00000612839 MCAMP43121 646 aa13.9□□□□□ -0.18
CCL3L3-201ENST00000612839 CCDC158Q5M9N0 1113 aa13.9□□□□□ -0.18
CCL3L3-201ENST00000612839 CLASRPQ8N2M8 674 aaKnown RBP13.9□□□□□ -0.18
CCL3L3-201ENST00000612839 MTMR14Q8NCE2 650 aa13.9□□□□□ -0.18
CCL3L3-201ENST00000612839 LRRCC1Q9C099 1032 aa13.9□□□□□ -0.18
CCL3L3-201ENST00000612839 GGA3Q9NZ52 723 aa13.9□□□□□ -0.18
CCL3L3-201ENST00000612839 SUGT1Q9Y2Z0 365 aa13.9□□□□□ -0.18
CCL3L3-201ENST00000612839 UQCRFS1P1P0C7P4 283 aa13.89□□□□□ -0.19
CCL3L3-201ENST00000612839 HSPA6P17066 643 aa13.89□□□□□ -0.19
CCL3L3-201ENST00000612839 PRDX5P30044 214 aa13.89□□□□□ -0.19
CCL3L3-201ENST00000612839 CFAP100Q494V2 611 aa13.89□□□□□ -0.19
CCL3L3-201ENST00000612839 TTC39AQ5SRH9 613 aa13.89□□□□□ -0.19
CCL3L3-201ENST00000612839 ANGEL2Q5VTE6 544 aaKnown RBP13.89□□□□□ -0.19
CCL3L3-201ENST00000612839 SPATA5Q8NB90 893 aa13.89□□□□□ -0.19
CCL3L3-201ENST00000612839 ZNF512BQ96KM6 892 aaPredicted RBP13.89□□□□□ -0.19
CCL3L3-201ENST00000612839 PRMT6Q96LA8 375 aaPredicted RBP13.89□□□□□ -0.19
CCL3L3-201ENST00000612839 GLIS2Q9BZE0 524 aaPredicted RBP13.89□□□□□ -0.19
CCL3L3-201ENST00000612839 TRAF5O00463 557 aa13.88□□□□□ -0.19
CCL3L3-201ENST00000612839 ATMINO43313 823 aaPredicted RBP13.88□□□□□ -0.19
CCL3L3-201ENST00000612839 SMARCA5O60264 1052 aaPredicted RBP13.88□□□□□ -0.19
CCL3L3-201ENST00000612839 FMR1Q06787 632 aaKnown RBP eCLIP13.88□□□□□ -0.19
CCL3L3-201ENST00000612839 HDAC1Q13547 482 aaPredicted RBP13.88□□□□□ -0.19
CCL3L3-201ENST00000612839 DLGAP5Q15398 846 aa13.88□□□□□ -0.19
CCL3L3-201ENST00000612839 CDC37L1Q7L3B6 337 aa13.88□□□□□ -0.19
CCL3L3-201ENST00000612839 DCPSQ96C86 337 aaKnown RBP13.88□□□□□ -0.19
CCL3L3-201ENST00000612839 BCL11AQ9H165 835 aa13.88□□□□□ -0.19
CCL3L3-201ENST00000612839 SERPINA10Q9UK55 444 aa13.88□□□□□ -0.19
CCL3L3-201ENST00000612839 TRPM7Q96QT4 1865 aa13.88□□□□□ -0.19
CCL3L3-201ENST00000612839 AOX1Q06278 1338 aa13.87□□□□□ -0.19
CCL3L3-201ENST00000612839 PITPNM2Q9BZ72 1349 aa13.87□□□□□ -0.19
CCL3L3-201ENST00000612839 CRKP46108 304 aa13.87□□□□□ -0.19
CCL3L3-201ENST00000612839 APLP1P51693 650 aa13.87□□□□□ -0.19
CCL3L3-201ENST00000612839 HDLBPQ00341 1268 aaKnown RBP13.87□□□□□ -0.19
CCL3L3-201ENST00000612839 DLK2Q6UY11 383 aa13.87□□□□□ -0.19
CCL3L3-201ENST00000612839 SCAF8Q9UPN6 1271 aaKnown RBP13.87□□□□□ -0.19
CCL3L3-201ENST00000612839 MYO5AQ9Y4I1 1855 aaKnown RBP13.87□□□□□ -0.19
CCL3L3-201ENST00000612839 MAST3O60307 1309 aa13.87□□□□□ -0.19
CCL3L3-201ENST00000612839 LDHBP07195 334 aaKnown RBP13.87□□□□□ -0.19
CCL3L3-201ENST00000612839 IFIT2P09913 472 aaKnown RBP13.87□□□□□ -0.19
CCL3L3-201ENST00000612839 RBM5P52756 815 aaKnown RBP eCLIP13.87□□□□□ -0.19
CCL3L3-201ENST00000612839 TBC1D9Q6ZT07 1266 aa13.87□□□□□ -0.19
CCL3L3-201ENST00000612839 KRT26Q7Z3Y9 468 aa13.87□□□□□ -0.19
CCL3L3-201ENST00000612839 USP48Q86UV5 1035 aa13.87□□□□□ -0.19
CCL3L3-201ENST00000612839 ZGPATQ8N5A5 531 aaKnown RBP13.87□□□□□ -0.19
CCL3L3-201ENST00000612839 MRIQ9BWK5 157 aa13.87□□□□□ -0.19
CCL3L3-201ENST00000612839 SNRKQ9NRH2 765 aa13.87□□□□□ -0.19
CCL3L3-201ENST00000612839 ABCF2Q9UG63 623 aa13.87□□□□□ -0.19
CCL3L3-201ENST00000612839 METRNQ9UJH8 293 aa13.87□□□□□ -0.19
CCL3L3-201ENST00000612839 MYH2Q9UKX2 1941 aa13.86□□□□□ -0.19
CCL3L3-201ENST00000612839 ADM5C9JUS6 153 aa13.86□□□□□ -0.19
CCL3L3-201ENST00000612839 SULF1Q8IWU6 871 aa13.86□□□□□ -0.19
CCL3L3-201ENST00000612839 TEKT1Q969V4 418 aa13.86□□□□□ -0.19
CCL3L3-201ENST00000612839 ZDHHC15Q96MV8 337 aa13.86□□□□□ -0.19
CCL3L3-201ENST00000612839 IGHDP01880 384 aa13.85□□□□□ -0.19
CCL3L3-201ENST00000612839 CYP2E1P05181 493 aaPredicted RBP13.85□□□□□ -0.19
CCL3L3-201ENST00000612839 ZAP70P43403 619 aa13.85□□□□□ -0.19
CCL3L3-201ENST00000612839 HTRA3P83110 453 aa13.85□□□□□ -0.19
CCL3L3-201ENST00000612839 DIXDC1Q155Q3 683 aa13.85□□□□□ -0.19
CCL3L3-201ENST00000612839 HHIPL2Q6UWX4 724 aa13.85□□□□□ -0.19
CCL3L3-201ENST00000612839 SLC39A7Q92504 469 aa13.85□□□□□ -0.19
CCL3L3-201ENST00000612839 CLRN2A0PK11 232 aa13.84□□□□□ -0.19
CCL3L3-201ENST00000612839 MYO1BO43795 1136 aa13.84□□□□□ -0.19
CCL3L3-201ENST00000612839 CST9Q5W186 159 aa13.84□□□□□ -0.19
CCL3L3-201ENST00000612839 SPTY2D1Q68D10 685 aaPredicted RBP13.84□□□□□ -0.19
CCL3L3-201ENST00000612839 APOBEC3HQ6NTF7 200 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms