RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 PRMT6Q96LA8 375 aaPredicted RBP22.27■■□□□ 1.16
SEMA3B-211ENST00000612509 THSD7BQ9C0I4 1608 aa22.27■■□□□ 1.16
SEMA3B-211ENST00000612509 CLRN2A0PK11 232 aa22.26■■□□□ 1.15
SEMA3B-211ENST00000612509 HDLBPQ00341 1268 aaKnown RBP22.26■■□□□ 1.15
SEMA3B-211ENST00000612509 GORABQ5T7V8 394 aa22.26■■□□□ 1.15
SEMA3B-211ENST00000612509 ERC1Q8IUD2 1116 aa22.26■■□□□ 1.15
SEMA3B-211ENST00000612509 JMYQ8N9B5 988 aa22.26■■□□□ 1.15
SEMA3B-211ENST00000612509 ARID4AP29374 1257 aaPredicted RBP22.25■■□□□ 1.15
SEMA3B-211ENST00000612509 PRDX5P30044 214 aa22.25■■□□□ 1.15
SEMA3B-211ENST00000612509 HSP90AB4PQ58FF6 505 aa22.25■■□□□ 1.15
SEMA3B-211ENST00000612509 SAPCD2Q86UD0 394 aa22.25■■□□□ 1.15
SEMA3B-211ENST00000612509 TEKT1Q969V4 418 aa22.25■■□□□ 1.15
SEMA3B-211ENST00000612509 GBA2Q9HCG7 927 aaPredicted RBP22.25■■□□□ 1.15
SEMA3B-211ENST00000612509 DEFB115Q30KQ5 88 aa22.24■■□□□ 1.15
SEMA3B-211ENST00000612509 SPDYE2Q495Y8 402 aa22.24■■□□□ 1.15
SEMA3B-211ENST00000612509 DBNDD2Q9BQY9 259 aa22.24■■□□□ 1.15
SEMA3B-211ENST00000612509 VEZTQ9HBM0 779 aa22.24■■□□□ 1.15
SEMA3B-211ENST00000612509 ZGPATQ8N5A5 531 aaKnown RBP22.23■■□□□ 1.15
SEMA3B-211ENST00000612509 MAST2Q6P0Q8 1798 aa22.22■■□□□ 1.15
SEMA3B-211ENST00000612509 LDHBP07195 334 aaKnown RBP22.22■■□□□ 1.15
SEMA3B-211ENST00000612509 VEGFBP49765 207 aa22.22■■□□□ 1.15
SEMA3B-211ENST00000612509 PRAMEF18Q5VWM3 479 aa22.22■■□□□ 1.15
SEMA3B-211ENST00000612509 PAXIP1Q6ZW49 1069 aaPredicted RBP22.22■■□□□ 1.15
SEMA3B-211ENST00000612509 ZDHHC15Q96MV8 337 aa22.22■■□□□ 1.15
SEMA3B-211ENST00000612509 TLR7Q9NYK1 1049 aaKnown RBP22.22■■□□□ 1.15
SEMA3B-211ENST00000612509 DBNLQ9UJU6 430 aaKnown RBP22.22■■□□□ 1.15
SEMA3B-211ENST00000612509 AKAP11Q9UKA4 1901 aa22.21■■□□□ 1.15
SEMA3B-211ENST00000612509 UQCRFS1P1P0C7P4 283 aa22.21■■□□□ 1.15
SEMA3B-211ENST00000612509 MCAMP43121 646 aa22.21■■□□□ 1.15
SEMA3B-211ENST00000612509 TTC39AQ5SRH9 613 aa22.21■■□□□ 1.15
SEMA3B-211ENST00000612509 HHIPL2Q6UWX4 724 aa22.21■■□□□ 1.15
SEMA3B-211ENST00000612509 PI16Q6UXB8 463 aa22.21■■□□□ 1.15
SEMA3B-211ENST00000612509 C2orf69Q8N8R5 385 aa22.21■■□□□ 1.15
SEMA3B-211ENST00000612509 SPATA5Q8NB90 893 aa22.21■■□□□ 1.15
SEMA3B-211ENST00000612509 RHPN1Q8TCX5 695 aa22.21■■□□□ 1.15
SEMA3B-211ENST00000612509 EAF2Q96CJ1 260 aaPredicted RBP22.21■■□□□ 1.15
SEMA3B-211ENST00000612509 HHIPL1Q96JK4 782 aa22.21■■□□□ 1.15
SEMA3B-211ENST00000612509 MRIQ9BWK5 157 aa22.21■■□□□ 1.15
SEMA3B-211ENST00000612509 TDRD3Q9H7E2 651 aaKnown RBP22.21■■□□□ 1.15
SEMA3B-211ENST00000612509 HMG20BQ9P0W2 317 aa22.21■■□□□ 1.15
SEMA3B-211ENST00000612509 ZNF70Q9UC06 446 aaPredicted RBP22.21■■□□□ 1.15
SEMA3B-211ENST00000612509 PPP2R3BQ9Y5P8 575 aa22.21■■□□□ 1.15
SEMA3B-211ENST00000612509 MYH2Q9UKX2 1941 aa22.21■■□□□ 1.15
SEMA3B-211ENST00000612509 HUNKP57058 714 aa22.2■■□□□ 1.14
SEMA3B-211ENST00000612509 DIXDC1Q155Q3 683 aa22.2■■□□□ 1.14
SEMA3B-211ENST00000612509 CCDC158Q5M9N0 1113 aa22.2■■□□□ 1.14
SEMA3B-211ENST00000612509 DEFB129Q9H1M3 183 aa22.2■■□□□ 1.14
SEMA3B-211ENST00000612509 SSC5DA1L4H1 1573 aa22.2■■□□□ 1.14
SEMA3B-211ENST00000612509 ECE1P42892 770 aa22.19■■□□□ 1.14
SEMA3B-211ENST00000612509 TNFAIP1Q13829 316 aa22.19■■□□□ 1.14
SEMA3B-211ENST00000612509 CYP4F22Q6NT55 531 aa22.19■■□□□ 1.14
SEMA3B-211ENST00000612509 AACSQ86V21 672 aa22.19■■□□□ 1.14
SEMA3B-211ENST00000612509 KIF1BPQ96EK5 621 aa22.19■■□□□ 1.14
SEMA3B-211ENST00000612509 CAPNS2Q96L46 248 aa22.19■■□□□ 1.14
SEMA3B-211ENST00000612509 CCDC8Q9H0W5 538 aaPredicted RBP22.19■■□□□ 1.14
SEMA3B-211ENST00000612509 IL1RAPL2Q9NP60 686 aa22.19■■□□□ 1.14
SEMA3B-211ENST00000612509 ABCF2Q9UG63 623 aa22.19■■□□□ 1.14
SEMA3B-211ENST00000612509 DAGLAQ9Y4D2 1042 aa22.19■■□□□ 1.14
SEMA3B-211ENST00000612509 WDR33Q9C0J8 1336 aaKnown RBP22.19■■□□□ 1.14
SEMA3B-211ENST00000612509 APBB1O00213 710 aa22.18■■□□□ 1.14
SEMA3B-211ENST00000612509 NF2P35240 595 aa22.18■■□□□ 1.14
SEMA3B-211ENST00000612509 FKBP1BP68106 108 aa22.18■■□□□ 1.14
SEMA3B-211ENST00000612509 APOBEC3HQ6NTF7 200 aaKnown RBP22.18■■□□□ 1.14
SEMA3B-211ENST00000612509 DZIP1Q86YF9 867 aaKnown RBP22.18■■□□□ 1.14
SEMA3B-211ENST00000612509 CRBNQ96SW2 442 aa22.18■■□□□ 1.14
SEMA3B-211ENST00000612509 RAB11FIP3O75154 756 aa22.17■■□□□ 1.14
SEMA3B-211ENST00000612509 GRM1Q13255 1194 aa22.17■■□□□ 1.14
SEMA3B-211ENST00000612509 SPTY2D1Q68D10 685 aaPredicted RBP22.17■■□□□ 1.14
SEMA3B-211ENST00000612509 ZNF512BQ96KM6 892 aaPredicted RBP22.17■■□□□ 1.14
SEMA3B-211ENST00000612509 GAKO14976 1311 aa22.16■■□□□ 1.14
SEMA3B-211ENST00000612509 RASA3Q14644 834 aa22.16■■□□□ 1.14
SEMA3B-211ENST00000612509 ERICH6Q7L0X2 663 aa22.16■■□□□ 1.14
SEMA3B-211ENST00000612509 TMOD2Q9NZR1 351 aa22.16■■□□□ 1.14
SEMA3B-211ENST00000612509 TCP10L2B9ZVM9 353 aa22.15■■□□□ 1.14
SEMA3B-211ENST00000612509 CACNB3P54284 484 aa22.15■■□□□ 1.14
SEMA3B-211ENST00000612509 CLASRPQ8N2M8 674 aaKnown RBP22.15■■□□□ 1.14
SEMA3B-211ENST00000612509 TNNI2P48788 182 aa22.14■■□□□ 1.13
SEMA3B-211ENST00000612509 TTLL12Q14166 644 aaPredicted RBP22.14■■□□□ 1.13
SEMA3B-211ENST00000612509 RGMBQ6NW40 437 aa22.14■■□□□ 1.13
SEMA3B-211ENST00000612509 TBC1D9Q6ZT07 1266 aa22.14■■□□□ 1.13
SEMA3B-211ENST00000612509 MOB2Q70IA6 237 aa22.14■■□□□ 1.13
SEMA3B-211ENST00000612509 SNRKQ9NRH2 765 aa22.14■■□□□ 1.13
SEMA3B-211ENST00000612509 MYO5AQ9Y4I1 1855 aaKnown RBP22.13■■□□□ 1.13
SEMA3B-211ENST00000612509 OTOFQ9HC10 1997 aa22.13■■□□□ 1.13
SEMA3B-211ENST00000612509 MECOMQ03112 1051 aa22.13■■□□□ 1.13
SEMA3B-211ENST00000612509 PCDHB15Q9Y5E8 787 aa22.13■■□□□ 1.13
SEMA3B-211ENST00000612509 DOCK2Q92608 1830 aa22.13■■□□□ 1.13
SEMA3B-211ENST00000612509 RPAP1Q9BWH6 1393 aaPredicted RBP22.12■■□□□ 1.13
SEMA3B-211ENST00000612509 MROH7-TTC4A0A0A0MT08 1334 aa22.12■■□□□ 1.13
SEMA3B-211ENST00000612509 HSPA1AP0DMV8 641 aaKnown RBP22.12■■□□□ 1.13
SEMA3B-211ENST00000612509 HSPA1BP0DMV9 641 aaKnown RBP22.12■■□□□ 1.13
SEMA3B-211ENST00000612509 NBPF12Q5TAG4 269 aaPredicted RBP22.12■■□□□ 1.13
SEMA3B-211ENST00000612509 CDAN1Q8IWY9 1227 aa22.12■■□□□ 1.13
SEMA3B-211ENST00000612509 SLF2Q8IX21 1173 aa22.12■■□□□ 1.13
SEMA3B-211ENST00000612509 TMEM39BQ9GZU3 492 aa22.12■■□□□ 1.13
SEMA3B-211ENST00000612509 RFX7Q2KHR2 1363 aa22.12■■□□□ 1.13
SEMA3B-211ENST00000612509 AOC2O75106 756 aa22.11■■□□□ 1.13
SEMA3B-211ENST00000612509 IFIT2P09913 472 aaKnown RBP22.11■■□□□ 1.13
SEMA3B-211ENST00000612509 ZAP70P43403 619 aa22.11■■□□□ 1.13
SEMA3B-211ENST00000612509 PRKG1Q13976 671 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms