RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 CDCA7LQ96GN5 454 aa22.29■■□□□ 1.16
SSBP1-215ENST00000612337 R3HDMLQ9H3Y0 253 aa22.29■■□□□ 1.16
SSBP1-215ENST00000612337 KIF16BQ96L93 1317 aa22.29■■□□□ 1.16
SSBP1-215ENST00000612337 FKTNO75072 461 aa22.28■■□□□ 1.16
SSBP1-215ENST00000612337 FRAT2O75474 233 aaPredicted RBP22.28■■□□□ 1.16
SSBP1-215ENST00000612337 HDLBPQ00341 1268 aaKnown RBP22.28■■□□□ 1.16
SSBP1-215ENST00000612337 CHAF1AQ13111 956 aaPredicted RBP22.28■■□□□ 1.16
SSBP1-215ENST00000612337 GRIK5Q16478 980 aa22.28■■□□□ 1.16
SSBP1-215ENST00000612337 IFNL1Q8IU54 200 aa22.28■■□□□ 1.16
SSBP1-215ENST00000612337 ANKRD13AQ8IZ07 590 aa22.28■■□□□ 1.16
SSBP1-215ENST00000612337 TRMT2AQ8IZ69 625 aaKnown RBP22.28■■□□□ 1.16
SSBP1-215ENST00000612337 SMC4Q9NTJ3 1288 aa22.28■■□□□ 1.16
SSBP1-215ENST00000612337 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.28■■□□□ 1.16
SSBP1-215ENST00000612337 HPS5Q9UPZ3 1129 aa22.28■■□□□ 1.16
SSBP1-215ENST00000612337 FGFR2P21802 821 aa22.27■■□□□ 1.16
SSBP1-215ENST00000612337 RFX5P48382 616 aaPredicted RBP22.27■■□□□ 1.16
SSBP1-215ENST00000612337 BCAMP50895 628 aa22.27■■□□□ 1.16
SSBP1-215ENST00000612337 PUM3Q15397 648 aaKnown RBP22.27■■□□□ 1.16
SSBP1-215ENST00000612337 TEPSINQ96N21 525 aa22.27■■□□□ 1.16
SSBP1-215ENST00000612337 SOX10P56693 466 aa22.26■■□□□ 1.15
SSBP1-215ENST00000612337 OTOFQ9HC10 1997 aa22.25■■□□□ 1.15
SSBP1-215ENST00000612337 HTTP42858 3142 aa22.25■■□□□ 1.15
SSBP1-215ENST00000612337 TCP10L2B9ZVM9 353 aa22.25■■□□□ 1.15
SSBP1-215ENST00000612337 EYA2O00167 538 aa22.25■■□□□ 1.15
SSBP1-215ENST00000612337 IGF2BP3O00425 579 aaKnown RBP eCLIP22.25■■□□□ 1.15
SSBP1-215ENST00000612337 IFIT1P09914 478 aaKnown RBP22.25■■□□□ 1.15
SSBP1-215ENST00000612337 CT47B1P0C2W7 299 aaPredicted RBP22.25■■□□□ 1.15
SSBP1-215ENST00000612337 GJA5P36382 358 aa22.25■■□□□ 1.15
SSBP1-215ENST00000612337 TNNI2P48788 182 aa22.25■■□□□ 1.15
SSBP1-215ENST00000612337 TEKT1Q969V4 418 aa22.25■■□□□ 1.15
SSBP1-215ENST00000612337 MRIQ9BWK5 157 aa22.25■■□□□ 1.15
SSBP1-215ENST00000612337 PDE4DIPQ5VU43 2346 aa22.24■■□□□ 1.15
SSBP1-215ENST00000612337 CDAN1Q8IWY9 1227 aa22.24■■□□□ 1.15
SSBP1-215ENST00000612337 TMEM39BQ9GZU3 492 aa22.24■■□□□ 1.15
SSBP1-215ENST00000612337 SUGT1Q9Y2Z0 365 aa22.24■■□□□ 1.15
SSBP1-215ENST00000612337 FBXO46Q6PJ61 603 aaPredicted RBP22.23■■□□□ 1.15
SSBP1-215ENST00000612337 LPIN2Q92539 896 aa22.23■■□□□ 1.15
SSBP1-215ENST00000612337 TESPA1A2RU30 521 aaPredicted RBP22.22■■□□□ 1.15
SSBP1-215ENST00000612337 SLC5A1P13866 664 aa22.22■■□□□ 1.15
SSBP1-215ENST00000612337 OTUD7BQ6GQQ9 843 aa22.22■■□□□ 1.15
SSBP1-215ENST00000612337 ZDHHC15Q96MV8 337 aa22.22■■□□□ 1.15
SSBP1-215ENST00000612337 ELP3Q9H9T3 547 aa22.22■■□□□ 1.15
SSBP1-215ENST00000612337 MAST3O60307 1309 aa22.22■■□□□ 1.15
SSBP1-215ENST00000612337 CENPFP49454 3210 aa22.21■■□□□ 1.15
SSBP1-215ENST00000612337 UBTFL1P0CB47 393 aaPredicted RBP22.21■■□□□ 1.15
SSBP1-215ENST00000612337 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.21■■□□□ 1.15
SSBP1-215ENST00000612337 ATG9AQ7Z3C6 839 aa22.21■■□□□ 1.15
SSBP1-215ENST00000612337 OPTNQ96CV9 577 aa22.21■■□□□ 1.15
SSBP1-215ENST00000612337 FBXO3Q9UK99 471 aa22.21■■□□□ 1.15
SSBP1-215ENST00000612337 NOB1Q9ULX3 412 aaKnown RBP22.21■■□□□ 1.15
SSBP1-215ENST00000612337 MAP3K9P80192 1104 aa22.2■■□□□ 1.14
SSBP1-215ENST00000612337 APOBEC3HQ6NTF7 200 aaKnown RBP22.2■■□□□ 1.14
SSBP1-215ENST00000612337 API5Q9BZZ5 524 aaKnown RBP22.2■■□□□ 1.14
SSBP1-215ENST00000612337 MYH13Q9UKX3 1938 aa22.19■■□□□ 1.14
SSBP1-215ENST00000612337 CIAO1O76071 339 aa22.19■■□□□ 1.14
SSBP1-215ENST00000612337 CACNB3P54284 484 aa22.19■■□□□ 1.14
SSBP1-215ENST00000612337 FKBP1CQ5VVH2 108 aa22.19■■□□□ 1.14
SSBP1-215ENST00000612337 HHIPL2Q6UWX4 724 aa22.19■■□□□ 1.14
SSBP1-215ENST00000612337 FAM83AQ86UY5 434 aa22.19■■□□□ 1.14
SSBP1-215ENST00000612337 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.19■■□□□ 1.147e-9■□□□□ 9.4
SSBP1-215ENST00000612337 WDR66Q8TBY9 1149 aa22.19■■□□□ 1.14
SSBP1-215ENST00000612337 PTPN18Q99952 460 aa22.19■■□□□ 1.14
SSBP1-215ENST00000612337 TMOD2Q9NZR1 351 aa22.19■■□□□ 1.14
SSBP1-215ENST00000612337 CRHR2Q13324 411 aa22.18■■□□□ 1.14
SSBP1-215ENST00000612337 VGLL4Q14135 290 aa22.18■■□□□ 1.14
SSBP1-215ENST00000612337 MS4A4AQ96JQ5 239 aa22.18■■□□□ 1.14
SSBP1-215ENST00000612337 HDAC5Q9UQL6 1122 aa22.18■■□□□ 1.14
SSBP1-215ENST00000612337 CSADQ9Y600 493 aa22.18■■□□□ 1.14
SSBP1-215ENST00000612337 CCER2I3L3R5 266 aa22.17■■□□□ 1.14
SSBP1-215ENST00000612337 SIL1Q9H173 461 aa22.17■■□□□ 1.14
SSBP1-215ENST00000612337 CNKSR2Q8WXI2 1034 aa22.16■■□□□ 1.14
SSBP1-215ENST00000612337 HOOK2Q96ED9 719 aa22.16■■□□□ 1.14
SSBP1-215ENST00000612337 ERO1AQ96HE7 468 aa22.16■■□□□ 1.14
SSBP1-215ENST00000612337 CEP126Q9P2H0 1117 aa22.16■■□□□ 1.14
SSBP1-215ENST00000612337 TRIM17Q9Y577 477 aa22.16■■□□□ 1.14
SSBP1-215ENST00000612337 LRRFIP2Q9Y608 721 aaKnown RBP22.16■■□□□ 1.14
SSBP1-215ENST00000612337 RPAP1Q9BWH6 1393 aaPredicted RBP22.15■■□□□ 1.14
SSBP1-215ENST00000612337 GTF2A2P52657 109 aa22.15■■□□□ 1.14
SSBP1-215ENST00000612337 ATP2B3Q16720 1220 aa22.15■■□□□ 1.14
SSBP1-215ENST00000612337 OTOP1Q7RTM1 612 aa22.15■■□□□ 1.14
SSBP1-215ENST00000612337 GNL3LQ9NVN8 582 aaKnown RBP22.15■■□□□ 1.14
SSBP1-215ENST00000612337 IL15P40933 162 aaPredicted RBP22.14■■□□□ 1.13
SSBP1-215ENST00000612337 RARSP54136 660 aaKnown RBP22.14■■□□□ 1.13
SSBP1-215ENST00000612337 BRI3BPQ8WY22 251 aa22.14■■□□□ 1.13
SSBP1-215ENST00000612337 CCL15-CCL14A0A0B4J2E2 113 aa22.13■■□□□ 1.13
SSBP1-215ENST00000612337 SPDYE5A6NIY4 337 aa22.13■■□□□ 1.13
SSBP1-215ENST00000612337 CCL15Q16663 113 aa22.13■■□□□ 1.13
SSBP1-215ENST00000612337 OTUD5Q96G74 571 aa22.13■■□□□ 1.13
SSBP1-215ENST00000612337 COPRSQ9NQ92 184 aa22.13■■□□□ 1.13
SSBP1-215ENST00000612337 BRCA2P51587 3418 aa22.12■■□□□ 1.13
SSBP1-215ENST00000612337 SP3Q02447 781 aa22.12■■□□□ 1.13
SSBP1-215ENST00000612337 DCAF15Q66K64 600 aa22.12■■□□□ 1.13
SSBP1-215ENST00000612337 CD99L2Q8TCZ2 262 aa22.12■■□□□ 1.13
SSBP1-215ENST00000612337 ARHGAP45Q92619 1136 aa22.12■■□□□ 1.13
SSBP1-215ENST00000612337 WRNIP1Q96S55 665 aa22.12■■□□□ 1.13
SSBP1-215ENST00000612337 MEIS3Q99687 375 aa22.12■■□□□ 1.13
SSBP1-215ENST00000612337 PA2G4Q9UQ80 394 aaKnown RBP22.12■■□□□ 1.13
SSBP1-215ENST00000612337 DAGLAQ9Y4D2 1042 aa22.12■■□□□ 1.13
SSBP1-215ENST00000612337 SNCAIPQ9Y6H5 919 aa22.12■■□□□ 1.13
SSBP1-215ENST00000612337 MKI67P46013 3256 aaKnown RBP22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms