RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 NBPF5PQ86XG9 351 aaPredicted RBP7.35□□□□□ -1.23
SNX13-213ENST00000611725 MYL10Q9BUA6 226 aa7.35□□□□□ -1.23
SNX13-213ENST00000611725 FTOQ9C0B1 505 aaKnown RBP eCLIP7.35□□□□□ -1.23
SNX13-213ENST00000611725 RFX7Q2KHR2 1363 aa7.35□□□□□ -1.23
SNX13-213ENST00000611725 ZNF75DP51815 510 aa7.35□□□□□ -1.23
SNX13-213ENST00000611725 SPATA5Q8NB90 893 aa7.35□□□□□ -1.23
SNX13-213ENST00000611725 ERCC4Q92889 916 aaPredicted RBP7.35□□□□□ -1.23
SNX13-213ENST00000611725 ARMT1Q9H993 441 aa7.35□□□□□ -1.23
SNX13-213ENST00000611725 DIP2AQ14689 1571 aa7.35□□□□□ -1.23
SNX13-213ENST00000611725 ZNF335Q9H4Z2 1342 aaPredicted RBP7.35□□□□□ -1.23
SNX13-213ENST00000611725 TOP1P11387 765 aaKnown RBP7.35□□□□□ -1.23
SNX13-213ENST00000611725 PUS7LQ9H0K6 701 aaKnown RBP7.35□□□□□ -1.23
SNX13-213ENST00000611725 PCDHA7Q9UN72 937 aa7.35□□□□□ -1.23
SNX13-213ENST00000611725 A0A1W2PQ27 194 aa7.35□□□□□ -1.23
SNX13-213ENST00000611725 A0A1W2PQ64 194 aa7.35□□□□□ -1.23
SNX13-213ENST00000611725 A0A1W2PQD8 194 aa7.35□□□□□ -1.23
SNX13-213ENST00000611725 TRIM75PA6NK02 468 aa7.35□□□□□ -1.23
SNX13-213ENST00000611725 PIP4K2BP78356 416 aa7.35□□□□□ -1.23
SNX13-213ENST00000611725 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.35□□□□□ -1.23
SNX13-213ENST00000611725 ALDH8A1Q9H2A2 487 aaPredicted RBP7.35□□□□□ -1.23
SNX13-213ENST00000611725 ARGLU1Q9NWB6 273 aaPredicted RBP7.35□□□□□ -1.23
SNX13-213ENST00000611725 RESTQ13127 1097 aa7.35□□□□□ -1.23
SNX13-213ENST00000611725 KLHL10Q6JEL2 608 aa7.35□□□□□ -1.23
SNX13-213ENST00000611725 STOX1Q6ZVD7 989 aa7.35□□□□□ -1.23
SNX13-213ENST00000611725 DZIP1Q86YF9 867 aaKnown RBP7.35□□□□□ -1.23
SNX13-213ENST00000611725 SLIT1O75093 1534 aa7.35□□□□□ -1.23
SNX13-213ENST00000611725 APOA5Q6Q788 366 aa7.35□□□□□ -1.23
SNX13-213ENST00000611725 TDRD7Q8NHU6 1098 aaKnown RBP7.35□□□□□ -1.23
SNX13-213ENST00000611725 RIMBP3CA6NJZ7 1639 aa7.34□□□□□ -1.23
SNX13-213ENST00000611725 RIMBP3BA6NNM3 1639 aa7.34□□□□□ -1.23
SNX13-213ENST00000611725 RIMBP3Q9UFD9 1639 aa7.34□□□□□ -1.23
SNX13-213ENST00000611725 AKNAD1Q5T1N1 836 aa7.34□□□□□ -1.23
SNX13-213ENST00000611725 PHKBQ93100 1093 aa7.34□□□□□ -1.23
SNX13-213ENST00000611725 MROH5Q6ZUA9 1318 aa7.34□□□□□ -1.23
SNX13-213ENST00000611725 MRVI1Q9Y6F6 885 aa7.34□□□□□ -1.23
SNX13-213ENST00000611725 TNS3Q68CZ2 1445 aa7.34□□□□□ -1.23
SNX13-213ENST00000611725 CLTCQ00610 1675 aaKnown RBP7.34□□□□□ -1.23
SNX13-213ENST00000611725 TSPY2A6NKD2 308 aa7.34□□□□□ -1.23
SNX13-213ENST00000611725 BMP15O95972 392 aa7.34□□□□□ -1.23
SNX13-213ENST00000611725 PPFIBP1Q86W92 1011 aa7.34□□□□□ -1.23
SNX13-213ENST00000611725 KRI1Q8N9T8 703 aaKnown RBP7.34□□□□□ -1.23
SNX13-213ENST00000611725 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.34□□□□□ -1.23
SNX13-213ENST00000611725 MRFAP1L1Q96HT8 127 aa7.34□□□□□ -1.23
SNX13-213ENST00000611725 MKNK2Q9HBH9 465 aa7.34□□□□□ -1.23
SNX13-213ENST00000611725 CCDC194A0A1B0GVG4 234 aa7.34□□□□□ -1.24
SNX13-213ENST00000611725 RAD21O60216 631 aa7.34□□□□□ -1.24
SNX13-213ENST00000611725 FOXO4P98177 505 aa7.34□□□□□ -1.24
SNX13-213ENST00000611725 TPTE2Q6XPS3 522 aa7.34□□□□□ -1.24
SNX13-213ENST00000611725 SYNE4Q8N205 404 aa7.34□□□□□ -1.24
SNX13-213ENST00000611725 KIAA1524Q8TCG1 905 aa7.34□□□□□ -1.24
SNX13-213ENST00000611725 LDHCP07864 332 aa7.33□□□□□ -1.24
SNX13-213ENST00000611725 MYL5Q02045 173 aa7.33□□□□□ -1.24
SNX13-213ENST00000611725 PDE4BQ07343 736 aa7.33□□□□□ -1.24
SNX13-213ENST00000611725 ZKSCAN3Q9BRR0 538 aa7.33□□□□□ -1.24
SNX13-213ENST00000611725 CRNKL1Q9BZJ0 848 aaKnown RBP7.33□□□□□ -1.24
SNX13-213ENST00000611725 SHPRHQ149N8 1683 aa7.33□□□□□ -1.24
SNX13-213ENST00000611725 IFNL3Q8IZI9 196 aa7.33□□□□□ -1.24
SNX13-213ENST00000611725 LINC00301Q8NCQ3 95 aa7.33□□□□□ -1.24
SNX13-213ENST00000611725 CCDC150Q8NCX0 1101 aa7.33□□□□□ -1.24
SNX13-213ENST00000611725 SMARCC2Q8TAQ2 1214 aa7.33□□□□□ -1.24
SNX13-213ENST00000611725 UBXN4Q92575 508 aa7.33□□□□□ -1.24
SNX13-213ENST00000611725 RTEL1Q9NZ71 1219 aa7.33□□□□□ -1.24
SNX13-213ENST00000611725 KIAA1468Q9P260 1216 aa7.33□□□□□ -1.24
SNX13-213ENST00000611725 KCNH3Q9ULD8 1083 aa7.33□□□□□ -1.24
SNX13-213ENST00000611725 ZNF202O95125 648 aa7.33□□□□□ -1.24
SNX13-213ENST00000611725 FAM177A1Q8N128 213 aaPredicted RBP7.33□□□□□ -1.24
SNX13-213ENST00000611725 ANKIB1Q9P2G1 1089 aa7.33□□□□□ -1.24
SNX13-213ENST00000611725 STX8Q9UNK0 236 aa7.33□□□□□ -1.24
SNX13-213ENST00000611725 LOC102724428A0A0B4J2F2 783 aa7.33□□□□□ -1.24
SNX13-213ENST00000611725 ZSCAN12O43309 604 aa7.33□□□□□ -1.24
SNX13-213ENST00000611725 USP5P45974 858 aa7.33□□□□□ -1.24
SNX13-213ENST00000611725 SIK1P57059 783 aa7.33□□□□□ -1.24
SNX13-213ENST00000611725 LRMPQ12912 555 aa7.33□□□□□ -1.24
SNX13-213ENST00000611725 IFNKQ9P0W0 207 aa7.33□□□□□ -1.24
SNX13-213ENST00000611725 PXDNQ92626 1479 aa7.33□□□□□ -1.24
SNX13-213ENST00000611725 KIF5BP33176 963 aa7.33□□□□□ -1.24
SNX13-213ENST00000611725 SCARF1Q14162 830 aa7.33□□□□□ -1.24
SNX13-213ENST00000611725 HLFQ16534 295 aa7.33□□□□□ -1.24
SNX13-213ENST00000611725 KANK3Q6NY19 840 aa7.33□□□□□ -1.24
SNX13-213ENST00000611725 SMARCE1Q969G3 411 aa7.33□□□□□ -1.24
SNX13-213ENST00000611725 RPAP1Q9BWH6 1393 aaPredicted RBP7.33□□□□□ -1.24
SNX13-213ENST00000611725 ERVV-1B6SEH8 477 aa7.32□□□□□ -1.24
SNX13-213ENST00000611725 NLRP5P59047 1200 aa7.32□□□□□ -1.24
SNX13-213ENST00000611725 HSP90AA4PQ58FG1 418 aa7.32□□□□□ -1.24
SNX13-213ENST00000611725 SOGA3Q5TF21 947 aa7.32□□□□□ -1.24
SNX13-213ENST00000611725 POLR3EQ9NVU0 708 aa7.32□□□□□ -1.24
SNX13-213ENST00000611725 PAXBP1Q9Y5B6 917 aa7.32□□□□□ -1.24
SNX13-213ENST00000611725 MAGEB6P1A0A0J9YX57 407 aa7.32□□□□□ -1.24
SNX13-213ENST00000611725 DEXIO95424 95 aa7.32□□□□□ -1.24
SNX13-213ENST00000611725 CMA1P23946 247 aa7.32□□□□□ -1.24
SNX13-213ENST00000611725 MCAMP43121 646 aa7.32□□□□□ -1.24
SNX13-213ENST00000611725 UBASH3AP57075 661 aa7.32□□□□□ -1.24
SNX13-213ENST00000611725 KIF23Q02241 960 aaPredicted RBP7.32□□□□□ -1.24
SNX13-213ENST00000611725 SLC39A14Q15043 492 aa7.32□□□□□ -1.24
SNX13-213ENST00000611725 PGBD1Q96JS3 809 aa7.32□□□□□ -1.24
SNX13-213ENST00000611725 PCMTD1Q96MG8 357 aaPredicted RBP7.32□□□□□ -1.24
SNX13-213ENST00000611725 SETDB2Q96T68 719 aa7.32□□□□□ -1.24
SNX13-213ENST00000611725 ZNF287Q9HBT7 754 aa7.32□□□□□ -1.24
SNX13-213ENST00000611725 WWC3Q9ULE0 1092 aa7.32□□□□□ -1.24
SNX13-213ENST00000611725 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 145.8 ms