RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 CMA1P23946 247 aa17.5■□□□□ 0.39
PCDHGB1-202ENST00000611598 BMS1Q14692 1282 aaKnown RBP17.5■□□□□ 0.39
PCDHGB1-202ENST00000611598 TAF3Q5VWG9 929 aa17.5■□□□□ 0.39
PCDHGB1-202ENST00000611598 TRIM65Q6PJ69 517 aa17.5■□□□□ 0.39
PCDHGB1-202ENST00000611598 BRAPQ7Z569 592 aa17.5■□□□□ 0.39
PCDHGB1-202ENST00000611598 MEGF6O75095 1541 aa17.5■□□□□ 0.39
PCDHGB1-202ENST00000611598 FGAP02671 866 aa17.5■□□□□ 0.39
PCDHGB1-202ENST00000611598 PNMA6AP0CW24 399 aaPredicted RBP17.5■□□□□ 0.39
PCDHGB1-202ENST00000611598 IL15P40933 162 aaPredicted RBP17.5■□□□□ 0.39
PCDHGB1-202ENST00000611598 WASHC4Q2M389 1173 aa17.5■□□□□ 0.39
PCDHGB1-202ENST00000611598 MB21D2Q8IYB1 491 aaPredicted RBP17.5■□□□□ 0.39
PCDHGB1-202ENST00000611598 DENND2AQ9ULE3 1009 aa17.5■□□□□ 0.39
PCDHGB1-202ENST00000611598 TMEM232C9JQI7 657 aa17.49■□□□□ 0.39
PCDHGB1-202ENST00000611598 CPLX1O14810 134 aa17.49■□□□□ 0.39
PCDHGB1-202ENST00000611598 TATP17735 454 aaPredicted RBP17.49■□□□□ 0.39
PCDHGB1-202ENST00000611598 TTLL7Q6ZT98 887 aa17.49■□□□□ 0.39
PCDHGB1-202ENST00000611598 GPR108Q9NPR9 543 aa17.49■□□□□ 0.39
PCDHGB1-202ENST00000611598 NBPF26B4DH59 902 aa17.49■□□□□ 0.39
PCDHGB1-202ENST00000611598 EYA2O00167 538 aa17.49■□□□□ 0.39
PCDHGB1-202ENST00000611598 IKBKBO14920 756 aa17.49■□□□□ 0.39
PCDHGB1-202ENST00000611598 ZBTB22O15209 634 aa17.49■□□□□ 0.39
PCDHGB1-202ENST00000611598 NRDCO43847 1150 aa17.49■□□□□ 0.39
PCDHGB1-202ENST00000611598 UBASH3AP57075 661 aa17.49■□□□□ 0.39
PCDHGB1-202ENST00000611598 PNOCQ13519 176 aa17.49■□□□□ 0.39
PCDHGB1-202ENST00000611598 NBPF14Q5TI25 921 aa17.49■□□□□ 0.39
PCDHGB1-202ENST00000611598 NBPF10Q6P3W6 841 aaKnown RBP17.49■□□□□ 0.39
PCDHGB1-202ENST00000611598 NBPF15Q8N660 670 aa17.49■□□□□ 0.39
PCDHGB1-202ENST00000611598 UTP14AQ9BVJ6 771 aaKnown RBP17.49■□□□□ 0.39
PCDHGB1-202ENST00000611598 CYP27B1O15528 508 aa17.48■□□□□ 0.39
PCDHGB1-202ENST00000611598 ADORA1P30542 326 aa17.48■□□□□ 0.39
PCDHGB1-202ENST00000611598 PLA2G4AP47712 749 aa17.48■□□□□ 0.39
PCDHGB1-202ENST00000611598 IMMTQ16891 758 aaKnown RBP17.48■□□□□ 0.39
PCDHGB1-202ENST00000611598 NKX2-3Q8TAU0 364 aa17.48■□□□□ 0.39
PCDHGB1-202ENST00000611598 SERPINC1P01008 464 aa17.48■□□□□ 0.39
PCDHGB1-202ENST00000611598 SYKP43405 635 aa17.48■□□□□ 0.39
PCDHGB1-202ENST00000611598 CFAP100Q494V2 611 aa17.48■□□□□ 0.39
PCDHGB1-202ENST00000611598 IFNL2Q8IZJ0 200 aa17.48■□□□□ 0.39
PCDHGB1-202ENST00000611598 CHMP4CQ96CF2 233 aa17.48■□□□□ 0.39
PCDHGB1-202ENST00000611598 NOL10Q9BSC4 688 aaKnown RBP17.48■□□□□ 0.39
PCDHGB1-202ENST00000611598 DHX16O60231 1041 aaKnown RBP17.47■□□□□ 0.39
PCDHGB1-202ENST00000611598 SCARF1Q14162 830 aa17.47■□□□□ 0.39
PCDHGB1-202ENST00000611598 SLC39A14Q15043 492 aa17.47■□□□□ 0.39
PCDHGB1-202ENST00000611598 SHC4Q6S5L8 630 aa17.47■□□□□ 0.39
PCDHGB1-202ENST00000611598 REXO1L1PQ8IX06 675 aa17.47■□□□□ 0.39
PCDHGB1-202ENST00000611598 PUS7LQ9H0K6 701 aaKnown RBP17.47■□□□□ 0.39
PCDHGB1-202ENST00000611598 EPC1Q9H2F5 836 aa17.47■□□□□ 0.39
PCDHGB1-202ENST00000611598 TUBE1Q9UJT0 475 aa17.47■□□□□ 0.39
PCDHGB1-202ENST00000611598 PHLPP2Q6ZVD8 1323 aa17.47■□□□□ 0.39
PCDHGB1-202ENST00000611598 URI1O94763 535 aaPredicted RBP17.47■□□□□ 0.39
PCDHGB1-202ENST00000611598 RXRAP19793 462 aa17.47■□□□□ 0.39
PCDHGB1-202ENST00000611598 PI16Q6UXB8 463 aa17.47■□□□□ 0.39
PCDHGB1-202ENST00000611598 FAM177A1Q8N128 213 aaPredicted RBP17.47■□□□□ 0.39
PCDHGB1-202ENST00000611598 CLIC6Q96NY7 704 aa17.47■□□□□ 0.39
PCDHGB1-202ENST00000611598 TMX1Q9H3N1 280 aa17.47■□□□□ 0.39
PCDHGB1-202ENST00000611598 ZRANB2O95218 330 aaKnown RBP eCLIP17.46■□□□□ 0.39
PCDHGB1-202ENST00000611598 HSP90AA4PQ58FG1 418 aa17.46■□□□□ 0.39
PCDHGB1-202ENST00000611598 KRT28Q7Z3Y7 464 aa17.46■□□□□ 0.39
PCDHGB1-202ENST00000611598 UBXN4Q92575 508 aa17.46■□□□□ 0.39
PCDHGB1-202ENST00000611598 CARD6Q9BX69 1037 aa17.46■□□□□ 0.39
PCDHGB1-202ENST00000611598 CWC25Q9NXE8 425 aaPredicted RBP17.46■□□□□ 0.39
PCDHGB1-202ENST00000611598 TADA3O75528 432 aa17.46■□□□□ 0.39
PCDHGB1-202ENST00000611598 SEC31AO94979 1220 aaKnown RBP17.46■□□□□ 0.39
PCDHGB1-202ENST00000611598 MYL5Q02045 173 aa17.46■□□□□ 0.39
PCDHGB1-202ENST00000611598 PARP3Q9Y6F1 533 aa17.46■□□□□ 0.39
PCDHGB1-202ENST00000611598 VPS37DQ86XT2 251 aa17.45■□□□□ 0.38
PCDHGB1-202ENST00000611598 ZBTB3Q9H5J0 574 aa17.45■□□□□ 0.38
PCDHGB1-202ENST00000611598 INTS13Q9NVM9 706 aa17.45■□□□□ 0.38
PCDHGB1-202ENST00000611598 FANCLQ9NW38 375 aa17.45■□□□□ 0.38
PCDHGB1-202ENST00000611598 HPSEQ9Y251 543 aa17.45■□□□□ 0.38
PCDHGB1-202ENST00000611598 CCDC66A2RUB6 948 aa17.45■□□□□ 0.38
PCDHGB1-202ENST00000611598 RALYLQ86SE5 291 aaKnown RBP17.45■□□□□ 0.38
PCDHGB1-202ENST00000611598 VSTM4Q8IW00 320 aa17.45■□□□□ 0.38
PCDHGB1-202ENST00000611598 MNS1Q8NEH6 495 aa17.45■□□□□ 0.38
PCDHGB1-202ENST00000611598 NCOA7Q8NI08 942 aa17.45■□□□□ 0.38
PCDHGB1-202ENST00000611598 DCAF5Q96JK2 942 aa17.45■□□□□ 0.38
PCDHGB1-202ENST00000611598 METTL16Q86W50 562 aaKnown RBP17.44■□□□□ 0.38
PCDHGB1-202ENST00000611598 TMEM139Q8IV31 216 aa17.44■□□□□ 0.38
PCDHGB1-202ENST00000611598 FOXP4Q8IVH2 680 aaPredicted RBP17.44■□□□□ 0.38
PCDHGB1-202ENST00000611598 ALG1Q9BT22 464 aa17.44■□□□□ 0.38
PCDHGB1-202ENST00000611598 VWA3AA6NCI4 1184 aa17.44■□□□□ 0.38
PCDHGB1-202ENST00000611598 TUBB4AP04350 444 aa17.44■□□□□ 0.38
PCDHGB1-202ENST00000611598 CDC27P30260 824 aa17.44■□□□□ 0.38
PCDHGB1-202ENST00000611598 PTPAQ15257 358 aa17.44■□□□□ 0.38
PCDHGB1-202ENST00000611598 TTC39AQ5SRH9 613 aa17.44■□□□□ 0.38
PCDHGB1-202ENST00000611598 PHKBQ93100 1093 aa17.44■□□□□ 0.38
PCDHGB1-202ENST00000611598 TIGD1Q96MW7 591 aa17.44■□□□□ 0.38
PCDHGB1-202ENST00000611598 NBPF3Q9H094 633 aa17.44■□□□□ 0.38
PCDHGB1-202ENST00000611598 TOP1P11387 765 aaKnown RBP17.43■□□□□ 0.38
PCDHGB1-202ENST00000611598 ZAP70P43403 619 aa17.43■□□□□ 0.38
PCDHGB1-202ENST00000611598 CABP4P57796 275 aa17.43■□□□□ 0.38
PCDHGB1-202ENST00000611598 PDE4BQ07343 736 aa17.43■□□□□ 0.38
PCDHGB1-202ENST00000611598 DHX8Q14562 1220 aaKnown RBP17.43■□□□□ 0.38
PCDHGB1-202ENST00000611598 TMCO3Q6UWJ1 677 aa17.43■□□□□ 0.38
PCDHGB1-202ENST00000611598 ANKLE2Q86XL3 938 aa17.43■□□□□ 0.38
PCDHGB1-202ENST00000611598 TICAM2Q86XR7 235 aa17.43■□□□□ 0.38
PCDHGB1-202ENST00000611598 CCDC85AQ96PX6 553 aaPredicted RBP17.43■□□□□ 0.38
PCDHGB1-202ENST00000611598 SENP2Q9HC62 589 aa17.43■□□□□ 0.38
PCDHGB1-202ENST00000611598 GLI3P10071 1580 aa17.43■□□□□ 0.38
PCDHGB1-202ENST00000611598 UBE2Q2LH0YL09 131 aa17.43■□□□□ 0.38
PCDHGB1-202ENST00000611598 FOXN1O15353 648 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms