RNA–Protein interactions for RNA: ENST00000610485.1

SNX20-205, Transcript of sorting nexin 20, humanhuman

TSL 5 BASIC

Gene SNX20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-205ENST00000610485 ZBTB22O15209 634 aa16.02■□□□□ 0.16
SNX20-205ENST00000610485 TTLL12Q14166 644 aaPredicted RBP16.02■□□□□ 0.16
SNX20-205ENST00000610485 ARMC9Q7Z3E5 817 aa16.02■□□□□ 0.16
SNX20-205ENST00000610485 MRIQ9BWK5 157 aa16.02■□□□□ 0.16
SNX20-205ENST00000610485 VEZTQ9HBM0 779 aa16.02■□□□□ 0.16
SNX20-205ENST00000610485 ZNF70Q9UC06 446 aaPredicted RBP16.02■□□□□ 0.16
SNX20-205ENST00000610485 TSKSQ9UJT2 592 aa16.02■□□□□ 0.16
SNX20-205ENST00000610485 TNFAIP1Q13829 316 aa16.01■□□□□ 0.15
SNX20-205ENST00000610485 RASA3Q14644 834 aa16.01■□□□□ 0.15
SNX20-205ENST00000610485 MAP3K11Q16584 847 aa16.01■□□□□ 0.15
SNX20-205ENST00000610485 LDLRAD1Q5T700 205 aa16.01■□□□□ 0.15
SNX20-205ENST00000610485 REM2Q8IYK8 340 aaPredicted RBP16.01■□□□□ 0.15
SNX20-205ENST00000610485 TDRD3Q9H7E2 651 aaKnown RBP16.01■□□□□ 0.15
SNX20-205ENST00000610485 SAGE1Q9NXZ1 904 aa16.01■□□□□ 0.15
SNX20-205ENST00000610485 MAST3O60307 1309 aa16■□□□□ 0.15
SNX20-205ENST00000610485 PRKG1Q13976 671 aa16■□□□□ 0.15
SNX20-205ENST00000610485 SUPT20HL1Q3ZLR7 823 aa16■□□□□ 0.15
SNX20-205ENST00000610485 WDR66Q8TBY9 1149 aa16■□□□□ 0.15
SNX20-205ENST00000610485 TEKT1Q969V4 418 aa16■□□□□ 0.15
SNX20-205ENST00000610485 CSRNP1Q96S65 589 aa16■□□□□ 0.15
SNX20-205ENST00000610485 ANGEL1Q9UNK9 670 aaKnown RBP16■□□□□ 0.15
SNX20-205ENST00000610485 PNMA6EA0A0J9YXQ4 647 aa15.99■□□□□ 0.15
SNX20-205ENST00000610485 SEMA3EO15041 775 aa15.99■□□□□ 0.15
SNX20-205ENST00000610485 PHKA1P46020 1223 aa15.99■□□□□ 0.15
SNX20-205ENST00000610485 NBPF12Q5TAG4 269 aaPredicted RBP15.99■□□□□ 0.15
SNX20-205ENST00000610485 ZDHHC15Q96MV8 337 aa15.99■□□□□ 0.15
SNX20-205ENST00000610485 GNL3LQ9NVN8 582 aaKnown RBP15.99■□□□□ 0.15
SNX20-205ENST00000610485 SALL1Q9NSC2 1324 aa15.98■□□□□ 0.15
SNX20-205ENST00000610485 PPP1R12BO60237 982 aaPredicted RBP15.98■□□□□ 0.15
SNX20-205ENST00000610485 RLBP1P12271 317 aa15.98■□□□□ 0.15
SNX20-205ENST00000610485 ADORA1P30542 326 aa15.98■□□□□ 0.15
SNX20-205ENST00000610485 TFCP2Q12800 502 aa15.98■□□□□ 0.15
SNX20-205ENST00000610485 HHIPL2Q6UWX4 724 aa15.98■□□□□ 0.15
SNX20-205ENST00000610485 FTSJ3Q8IY81 847 aaKnown RBP15.98■□□□□ 0.15
SNX20-205ENST00000610485 TEPSINQ96N21 525 aa15.98■□□□□ 0.15
SNX20-205ENST00000610485 RNF186Q9NXI6 227 aa15.98■□□□□ 0.15
SNX20-205ENST00000610485 FZD1Q9UP38 647 aa15.98■□□□□ 0.15
SNX20-205ENST00000610485 A0A1B0GUL7 405 aa15.97■□□□□ 0.15
SNX20-205ENST00000610485 UNCXA6NJT0 531 aa15.97■□□□□ 0.15
SNX20-205ENST00000610485 CCDC102BQ68D86 513 aa15.97■□□□□ 0.15
SNX20-205ENST00000610485 APOBEC3HQ6NTF7 200 aaKnown RBP15.97■□□□□ 0.15
SNX20-205ENST00000610485 DENND2AQ9ULE3 1009 aa15.97■□□□□ 0.15
SNX20-205ENST00000610485 AKAP2Q9Y2D5 859 aa15.97■□□□□ 0.15
SNX20-205ENST00000610485 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.97■□□□□ 0.15
SNX20-205ENST00000610485 PDS5AQ29RF7 1337 aaKnown RBP15.96■□□□□ 0.15
SNX20-205ENST00000610485 TCP10L2B9ZVM9 353 aa15.96■□□□□ 0.15
SNX20-205ENST00000610485 TNNI2P48788 182 aa15.96■□□□□ 0.15
SNX20-205ENST00000610485 TIMM10P62072 90 aa15.96■□□□□ 0.15
SNX20-205ENST00000610485 POLA2Q14181 598 aa15.96■□□□□ 0.15
SNX20-205ENST00000610485 ZBTB7BO15156 539 aaPredicted RBP15.95■□□□□ 0.14
SNX20-205ENST00000610485 USP2O75604 605 aaPredicted RBP15.95■□□□□ 0.14
SNX20-205ENST00000610485 TRPA1O75762 1119 aa15.95■□□□□ 0.14
SNX20-205ENST00000610485 PRDX5P30044 214 aa15.95■□□□□ 0.14
SNX20-205ENST00000610485 TM4SF4P48230 202 aa15.95■□□□□ 0.14
SNX20-205ENST00000610485 FKBP1CQ5VVH2 108 aa15.95■□□□□ 0.14
SNX20-205ENST00000610485 SPRYD7Q5W111 196 aa15.95■□□□□ 0.14
SNX20-205ENST00000610485 ITPRIPQ8IWB1 547 aa15.95■□□□□ 0.14
SNX20-205ENST00000610485 CDAN1Q8IWY9 1227 aa15.95■□□□□ 0.14
SNX20-205ENST00000610485 SSH3Q8TE77 659 aa15.95■□□□□ 0.14
SNX20-205ENST00000610485 XAGE2Q96GT9 111 aa15.95■□□□□ 0.14
SNX20-205ENST00000610485 TMEM39BQ9GZU3 492 aa15.95■□□□□ 0.14
SNX20-205ENST00000610485 LDHBP07195 334 aaKnown RBP15.94■□□□□ 0.14
SNX20-205ENST00000610485 IREB2P48200 963 aaKnown RBP15.94■□□□□ 0.14
SNX20-205ENST00000610485 CACNB3P54284 484 aa15.94■□□□□ 0.14
SNX20-205ENST00000610485 ATP8B2P98198 1209 aa15.94■□□□□ 0.14
SNX20-205ENST00000610485 G3BP1Q13283 466 aaKnown RBP eCLIP15.94■□□□□ 0.14
SNX20-205ENST00000610485 RASGRF1Q13972 1273 aa15.94■□□□□ 0.14
SNX20-205ENST00000610485 MVPQ14764 893 aaKnown RBP15.94■□□□□ 0.14
SNX20-205ENST00000610485 FAM83AQ86UY5 434 aa15.94■□□□□ 0.14
SNX20-205ENST00000610485 CLMNQ96JQ2 1002 aa15.94■□□□□ 0.14
SNX20-205ENST00000610485 TMOD2Q9NZR1 351 aa15.94■□□□□ 0.14
SNX20-205ENST00000610485 DAGLAQ9Y4D2 1042 aa15.94■□□□□ 0.14
SNX20-205ENST00000610485 RPAP1Q9BWH6 1393 aaPredicted RBP15.93■□□□□ 0.14
SNX20-205ENST00000610485 CAPN15O75808 1086 aa15.93■□□□□ 0.14
SNX20-205ENST00000610485 ZBTB48P10074 688 aaPredicted RBP15.93■□□□□ 0.14
SNX20-205ENST00000610485 SREBF2Q12772 1141 aa15.93■□□□□ 0.14
SNX20-205ENST00000610485 MKRN3Q13064 507 aaKnown RBP15.93■□□□□ 0.14
SNX20-205ENST00000610485 DIXDC1Q155Q3 683 aa15.93■□□□□ 0.14
SNX20-205ENST00000610485 ANKRD13AQ8IZ07 590 aa15.93■□□□□ 0.14
SNX20-205ENST00000610485 ZGPATQ8N5A5 531 aaKnown RBP15.93■□□□□ 0.14
SNX20-205ENST00000610485 SLC10A4Q96EP9 437 aa15.93■□□□□ 0.14
SNX20-205ENST00000610485 C1orf115Q9H7X2 142 aa15.93■□□□□ 0.14
SNX20-205ENST00000610485 MYH13Q9UKX3 1938 aa15.93■□□□□ 0.14
SNX20-205ENST00000610485 WNK4Q96J92 1243 aa15.92■□□□□ 0.14
SNX20-205ENST00000610485 NEUROD6Q96NK8 337 aa15.92■□□□□ 0.14
SNX20-205ENST00000610485 PANK1Q8TE04 598 aa15.91■□□□□ 0.14
SNX20-205ENST00000610485 GPR108Q9NPR9 543 aa15.91■□□□□ 0.14
SNX20-205ENST00000610485 GAKO14976 1311 aa15.91■□□□□ 0.14
SNX20-205ENST00000610485 MANSC4A6NHS7 340 aaPredicted RBP15.9■□□□□ 0.14
SNX20-205ENST00000610485 MS4A1P11836 297 aa15.9■□□□□ 0.14
SNX20-205ENST00000610485 CDC42EP5Q6NZY7 148 aa15.9■□□□□ 0.14
SNX20-205ENST00000610485 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.9■□□□□ 0.14
SNX20-205ENST00000610485 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.9■□□□□ 0.14
SNX20-205ENST00000610485 ABHD8Q96I13 439 aa15.9■□□□□ 0.14
SNX20-205ENST00000610485 CFHR5Q9BXR6 569 aa15.9■□□□□ 0.14
SNX20-205ENST00000610485 HMG20BQ9P0W2 317 aa15.9■□□□□ 0.14
SNX20-205ENST00000610485 NOP58Q9Y2X3 529 aaKnown RBP15.9■□□□□ 0.14
SNX20-205ENST00000610485 SURF6O75683 361 aaKnown RBP15.89■□□□□ 0.13
SNX20-205ENST00000610485 ARID4AP29374 1257 aaPredicted RBP15.89■□□□□ 0.13
SNX20-205ENST00000610485 GJA5P36382 358 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms