RNA–Protein interactions for RNA: ENST00000610289.2

PRAMEF28P-201, Transcript of PRAME family member 28, pseudogene, humanhuman

BASIC

Gene PRAMEF28P, Length 1,450 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF28P-201ENST00000610289 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.61□□□□□ -0.23
PRAMEF28P-201ENST00000610289 CNKSR2Q8WXI2 1034 aa13.61□□□□□ -0.23
PRAMEF28P-201ENST00000610289 OPTNQ96CV9 577 aa13.61□□□□□ -0.23
PRAMEF28P-201ENST00000610289 ERO1AQ96HE7 468 aa13.61□□□□□ -0.23
PRAMEF28P-201ENST00000610289 MS4A4AQ96JQ5 239 aa13.61□□□□□ -0.23
PRAMEF28P-201ENST00000610289 PTPN22Q9Y2R2 807 aa13.61□□□□□ -0.23
PRAMEF28P-201ENST00000610289 BRCA2P51587 3418 aa13.61□□□□□ -0.23
PRAMEF28P-201ENST00000610289 A0A1B0GUL6 1792 aa13.61□□□□□ -0.23
PRAMEF28P-201ENST00000610289 TCP10L2B9ZVM9 353 aa13.61□□□□□ -0.23
PRAMEF28P-201ENST00000610289 ANP32CO43423 234 aa13.61□□□□□ -0.23
PRAMEF28P-201ENST00000610289 NBPF7P0C2Y1 421 aaPredicted RBP13.61□□□□□ -0.23
PRAMEF28P-201ENST00000610289 CRKP46108 304 aa13.61□□□□□ -0.23
PRAMEF28P-201ENST00000610289 DIEXFQ68CQ4 756 aaKnown RBP13.61□□□□□ -0.23
PRAMEF28P-201ENST00000610289 INTS3Q68E01 1043 aaKnown RBP13.61□□□□□ -0.23
PRAMEF28P-201ENST00000610289 FBXO33Q7Z6M2 555 aa13.61□□□□□ -0.23
PRAMEF28P-201ENST00000610289 TMEM39BQ9GZU3 492 aa13.61□□□□□ -0.23
PRAMEF28P-201ENST00000610289 ECM29Q5VYK3 1845 aa13.6□□□□□ -0.23
PRAMEF28P-201ENST00000610289 SP3Q02447 781 aa13.6□□□□□ -0.23
PRAMEF28P-201ENST00000610289 EFCC1Q9HA90 598 aa13.6□□□□□ -0.23
PRAMEF28P-201ENST00000610289 IQSEC3Q9UPP2 1182 aaPredicted RBP13.6□□□□□ -0.23
PRAMEF28P-201ENST00000610289 MROH5Q6ZUA9 1318 aa13.59□□□□□ -0.23
PRAMEF28P-201ENST00000610289 MAP3K9P80192 1104 aa13.59□□□□□ -0.23
PRAMEF28P-201ENST00000610289 VGLL4Q14135 290 aa13.59□□□□□ -0.23
PRAMEF28P-201ENST00000610289 BRI3BPQ8WY22 251 aa13.59□□□□□ -0.23
PRAMEF28P-201ENST00000610289 UTYO14607 1347 aa13.58□□□□□ -0.24
PRAMEF28P-201ENST00000610289 LRRC24Q50LG9 513 aa13.58□□□□□ -0.24
PRAMEF28P-201ENST00000610289 VPS37DQ86XT2 251 aa13.58□□□□□ -0.24
PRAMEF28P-201ENST00000610289 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.58□□□□□ -0.24
PRAMEF28P-201ENST00000610289 ARMC5Q96C12 935 aa13.58□□□□□ -0.24
PRAMEF28P-201ENST00000610289 BICC1Q9H694 974 aaKnown RBP13.58□□□□□ -0.24
PRAMEF28P-201ENST00000610289 TNNI2P48788 182 aa13.57□□□□□ -0.24
PRAMEF28P-201ENST00000610289 CACNB3P54284 484 aa13.57□□□□□ -0.24
PRAMEF28P-201ENST00000610289 HDLBPQ00341 1268 aaKnown RBP13.57□□□□□ -0.24
PRAMEF28P-201ENST00000610289 CHAF1AQ13111 956 aaPredicted RBP13.57□□□□□ -0.24
PRAMEF28P-201ENST00000610289 RABL6Q3YEC7 729 aaPredicted RBP13.57□□□□□ -0.24
PRAMEF28P-201ENST00000610289 ANKRD44Q8N8A2 993 aa13.57□□□□□ -0.24
PRAMEF28P-201ENST00000610289 CCL15-CCL14A0A0B4J2E2 113 aa13.56□□□□□ -0.24
PRAMEF28P-201ENST00000610289 PDE8BO95263 885 aa13.56□□□□□ -0.24
PRAMEF28P-201ENST00000610289 EN2P19622 333 aaPredicted RBP13.56□□□□□ -0.24
PRAMEF28P-201ENST00000610289 BCAMP50895 628 aa13.56□□□□□ -0.24
PRAMEF28P-201ENST00000610289 GTF2A2P52657 109 aa13.56□□□□□ -0.24
PRAMEF28P-201ENST00000610289 CCL15Q16663 113 aa13.56□□□□□ -0.24
PRAMEF28P-201ENST00000610289 METTL24Q5JXM2 366 aa13.56□□□□□ -0.24
PRAMEF28P-201ENST00000610289 FAM43AQ8N2R8 423 aa13.56□□□□□ -0.24
PRAMEF28P-201ENST00000610289 VGLL2Q8N8G2 317 aa13.56□□□□□ -0.24
PRAMEF28P-201ENST00000610289 OTUD5Q96G74 571 aa13.56□□□□□ -0.24
PRAMEF28P-201ENST00000610289 LAMB1P07942 1786 aa13.56□□□□□ -0.24
PRAMEF28P-201ENST00000610289 FRAT2O75474 233 aaPredicted RBP13.55□□□□□ -0.24
PRAMEF28P-201ENST00000610289 TAF1CQ15572 869 aaPredicted RBP13.55□□□□□ -0.24
PRAMEF28P-201ENST00000610289 CAVIN4Q5BKX8 364 aa13.55□□□□□ -0.24
PRAMEF28P-201ENST00000610289 FAM9BQ8IZU0 186 aa13.55□□□□□ -0.24
PRAMEF28P-201ENST00000610289 KLHDC4Q8TBB5 520 aa13.55□□□□□ -0.24
PRAMEF28P-201ENST00000610289 TBC1D22AQ8WUA7 517 aa13.55□□□□□ -0.24
PRAMEF28P-201ENST00000610289 TEKT1Q969V4 418 aa13.55□□□□□ -0.24
PRAMEF28P-201ENST00000610289 MRIQ9BWK5 157 aa13.55□□□□□ -0.24
PRAMEF28P-201ENST00000610289 ZFYVE28Q9HCC9 887 aa13.55□□□□□ -0.24
PRAMEF28P-201ENST00000610289 CSADQ9Y600 493 aa13.55□□□□□ -0.24
PRAMEF28P-201ENST00000610289 SPDYE5A6NIY4 337 aa13.55□□□□□ -0.24
PRAMEF28P-201ENST00000610289 APOBEC3HQ6NTF7 200 aaKnown RBP13.55□□□□□ -0.24
PRAMEF28P-201ENST00000610289 MRPL50Q8N5N7 158 aaKnown RBP13.55□□□□□ -0.24
PRAMEF28P-201ENST00000610289 ZKSCAN4Q969J2 545 aaPredicted RBP13.55□□□□□ -0.24
PRAMEF28P-201ENST00000610289 ZDHHC15Q96MV8 337 aa13.55□□□□□ -0.24
PRAMEF28P-201ENST00000610289 SNCAIPQ9Y6H5 919 aa13.55□□□□□ -0.24
PRAMEF28P-201ENST00000610289 OTOFQ9HC10 1997 aa13.54□□□□□ -0.24
PRAMEF28P-201ENST00000610289 GCC1Q96CN9 775 aa13.54□□□□□ -0.24
PRAMEF28P-201ENST00000610289 ZNF333Q96JL9 665 aa13.54□□□□□ -0.24
PRAMEF28P-201ENST00000610289 USP44Q9H0E7 712 aa13.54□□□□□ -0.24
PRAMEF28P-201ENST00000610289 PTCH2Q9Y6C5 1203 aa13.54□□□□□ -0.24
PRAMEF28P-201ENST00000610289 ZNF521Q96K83 1311 aa13.53□□□□□ -0.24
PRAMEF28P-201ENST00000610289 CEP290O15078 2479 aa13.53□□□□□ -0.24
PRAMEF28P-201ENST00000610289 IRF6O14896 467 aa13.53□□□□□ -0.24
PRAMEF28P-201ENST00000610289 ARHGEF6Q15052 776 aa13.53□□□□□ -0.24
PRAMEF28P-201ENST00000610289 HABP4Q5JVS0 413 aaKnown RBP13.53□□□□□ -0.24
PRAMEF28P-201ENST00000610289 FKBP1CQ5VVH2 108 aa13.53□□□□□ -0.24
PRAMEF28P-201ENST00000610289 FAM83AQ86UY5 434 aa13.53□□□□□ -0.24
PRAMEF28P-201ENST00000610289 ERO1BQ86YB8 467 aa13.53□□□□□ -0.24
PRAMEF28P-201ENST00000610289 WRNIP1Q96S55 665 aa13.53□□□□□ -0.24
PRAMEF28P-201ENST00000610289 BTBD19C9JJ37 291 aa13.52□□□□□ -0.25
PRAMEF28P-201ENST00000610289 TLR2O60603 784 aa13.52□□□□□ -0.25
PRAMEF28P-201ENST00000610289 CETPP11597 493 aa13.52□□□□□ -0.25
PRAMEF28P-201ENST00000610289 FGFR2P21802 821 aa13.52□□□□□ -0.25
PRAMEF28P-201ENST00000610289 TMEM106CQ9BVX2 250 aa13.52□□□□□ -0.25
PRAMEF28P-201ENST00000610289 ARHGAP39Q9C0H5 1083 aa13.52□□□□□ -0.25
PRAMEF28P-201ENST00000610289 TMOD2Q9NZR1 351 aa13.52□□□□□ -0.25
PRAMEF28P-201ENST00000610289 SUGT1Q9Y2Z0 365 aa13.52□□□□□ -0.25
PRAMEF28P-201ENST00000610289 SNAPC2Q13487 334 aa13.51□□□□□ -0.25
PRAMEF28P-201ENST00000610289 PUM3Q15397 648 aaKnown RBP13.51□□□□□ -0.25
PRAMEF28P-201ENST00000610289 SLC9C1Q4G0N8 1177 aa13.51□□□□□ -0.25
PRAMEF28P-201ENST00000610289 HHIPL2Q6UWX4 724 aa13.51□□□□□ -0.25
PRAMEF28P-201ENST00000610289 MIGA2Q7L4E1 593 aa13.51□□□□□ -0.25
PRAMEF28P-201ENST00000610289 NBPF11Q86T75 865 aa13.51□□□□□ -0.25
PRAMEF28P-201ENST00000610289 KIF16BQ96L93 1317 aa13.51□□□□□ -0.25
PRAMEF28P-201ENST00000610289 IFIT1P09914 478 aaKnown RBP13.5□□□□□ -0.25
PRAMEF28P-201ENST00000610289 RFX5P48382 616 aaPredicted RBP13.5□□□□□ -0.25
PRAMEF28P-201ENST00000610289 SSH1Q8WYL5 1049 aa13.5□□□□□ -0.25
PRAMEF28P-201ENST00000610289 HOOK2Q96ED9 719 aa13.5□□□□□ -0.25
PRAMEF28P-201ENST00000610289 ZCCHC17Q9NP64 241 aaKnown RBP13.5□□□□□ -0.25
PRAMEF28P-201ENST00000610289 ARAP2Q8WZ64 1704 aa13.5□□□□□ -0.25
PRAMEF28P-201ENST00000610289 PTPRCP08575 1304 aa13.5□□□□□ -0.25
PRAMEF28P-201ENST00000610289 WDHD1O75717 1129 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms