RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 RXRBP28702 533 aa7.49□□□□□ -1.21
SMCHD1-213ENST00000609587 ARHGAP4P98171 946 aa7.49□□□□□ -1.21
SMCHD1-213ENST00000609587 EHHADHQ08426 723 aa7.49□□□□□ -1.21
SMCHD1-213ENST00000609587 HGSNATQ68CP4 663 aa7.49□□□□□ -1.21
SMCHD1-213ENST00000609587 NCAPG2Q86XI2 1143 aa7.49□□□□□ -1.21
SMCHD1-213ENST00000609587 FLCNQ8NFG4 579 aa7.49□□□□□ -1.21
SMCHD1-213ENST00000609587 SLC7A3Q8WY07 619 aa7.49□□□□□ -1.21
SMCHD1-213ENST00000609587 BSDC1Q9NW68 430 aaPredicted RBP7.49□□□□□ -1.21
SMCHD1-213ENST00000609587 KANSL3Q9P2N6 904 aa7.49□□□□□ -1.21
SMCHD1-213ENST00000609587 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.49□□□□□ -1.21
SMCHD1-213ENST00000609587 FAM177BA6PVY3 158 aa7.48□□□□□ -1.21
SMCHD1-213ENST00000609587 ADMP35318 185 aa7.48□□□□□ -1.21
SMCHD1-213ENST00000609587 CABP4P57796 275 aa7.48□□□□□ -1.21
SMCHD1-213ENST00000609587 C8orf34Q49A92 452 aa7.48□□□□□ -1.21
SMCHD1-213ENST00000609587 GJD3Q8N144 294 aa7.48□□□□□ -1.21
SMCHD1-213ENST00000609587 METTL22Q9BUU2 404 aaPredicted RBP7.48□□□□□ -1.21
SMCHD1-213ENST00000609587 TMPRSS13Q9BYE2 586 aa7.48□□□□□ -1.21
SMCHD1-213ENST00000609587 CCDC87Q9NVE4 849 aa7.48□□□□□ -1.21
SMCHD1-213ENST00000609587 MAPK1P28482 360 aa7.47□□□□□ -1.21
SMCHD1-213ENST00000609587 CNTN3Q9P232 1028 aa7.47□□□□□ -1.21
SMCHD1-213ENST00000609587 DCTN4Q9UJW0 460 aa7.47□□□□□ -1.21
SMCHD1-213ENST00000609587 FAM95CA0A1B0GW59 222 aa7.46□□□□□ -1.22
SMCHD1-213ENST00000609587 A6NHS1 94 aa7.46□□□□□ -1.22
SMCHD1-213ENST00000609587 NFKBIEO00221 500 aa7.46□□□□□ -1.22
SMCHD1-213ENST00000609587 CYP26A1O43174 497 aa7.46□□□□□ -1.22
SMCHD1-213ENST00000609587 ZNF124Q15973 351 aa7.46□□□□□ -1.22
SMCHD1-213ENST00000609587 SMG8Q8ND04 991 aaKnown RBP7.46□□□□□ -1.22
SMCHD1-213ENST00000609587 AGBL5Q8NDL9 886 aa7.46□□□□□ -1.22
SMCHD1-213ENST00000609587 PMEPA1Q969W9 287 aa7.46□□□□□ -1.22
SMCHD1-213ENST00000609587 HHIPQ96QV1 700 aa7.46□□□□□ -1.22
SMCHD1-213ENST00000609587 KRTAP4-5Q9BYR2 181 aa7.46□□□□□ -1.22
SMCHD1-213ENST00000609587 SUGCTQ9HAC7 445 aa7.46□□□□□ -1.22
SMCHD1-213ENST00000609587 BRPF3Q9ULD4 1205 aa7.46□□□□□ -1.22
SMCHD1-213ENST00000609587 SOX13Q9UN79 622 aa7.46□□□□□ -1.22
SMCHD1-213ENST00000609587 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.46□□□□□ -1.22
SMCHD1-213ENST00000609587 KRTAP9-7A8MTY7 169 aa7.45□□□□□ -1.22
SMCHD1-213ENST00000609587 NDUFB5O43674 189 aa7.45□□□□□ -1.22
SMCHD1-213ENST00000609587 TNFRSF21O75509 655 aa7.45□□□□□ -1.22
SMCHD1-213ENST00000609587 FBLN7Q53RD9 439 aa7.45□□□□□ -1.22
SMCHD1-213ENST00000609587 NUTM2GQ5VZR2 741 aa7.45□□□□□ -1.22
SMCHD1-213ENST00000609587 PAOXQ6QHF9 649 aa7.45□□□□□ -1.22
SMCHD1-213ENST00000609587 ZAR1Q86SH2 424 aa7.45□□□□□ -1.22
SMCHD1-213ENST00000609587 C1orf127Q8N9H9 656 aa7.45□□□□□ -1.22
SMCHD1-213ENST00000609587 RGS22Q8NE09 1264 aa7.45□□□□□ -1.22
SMCHD1-213ENST00000609587 FBLIM1Q8WUP2 373 aa7.45□□□□□ -1.22
SMCHD1-213ENST00000609587 GATA6Q92908 595 aa7.45□□□□□ -1.22
SMCHD1-213ENST00000609587 CITED4Q96RK1 184 aa7.45□□□□□ -1.22
SMCHD1-213ENST00000609587 CHRDQ9H2X0 955 aa7.45□□□□□ -1.22
SMCHD1-213ENST00000609587 LOC100289279A0A1B0GTE1 492 aa7.44□□□□□ -1.22
SMCHD1-213ENST00000609587 FAM170BA6NMN3 283 aa7.44□□□□□ -1.22
SMCHD1-213ENST00000609587 DLGAP3O95886 979 aa7.44□□□□□ -1.22
SMCHD1-213ENST00000609587 CES1P23141 567 aa7.44□□□□□ -1.22
SMCHD1-213ENST00000609587 C19orf57Q0VDD7 668 aa7.44□□□□□ -1.22
SMCHD1-213ENST00000609587 CDPF1Q6NVV7 123 aa7.44□□□□□ -1.22
SMCHD1-213ENST00000609587 WFDC3Q8IUB2 231 aa7.44□□□□□ -1.22
SMCHD1-213ENST00000609587 C12orf50Q8NA57 414 aaPredicted RBP7.44□□□□□ -1.22
SMCHD1-213ENST00000609587 PRKAG2Q9UGJ0 569 aa7.44□□□□□ -1.22
SMCHD1-213ENST00000609587 SALL4Q9UJQ4 1053 aa7.44□□□□□ -1.22
SMCHD1-213ENST00000609587 CARMIL2Q6F5E8 1435 aa7.44□□□□□ -1.22
SMCHD1-213ENST00000609587 NFKBIBQ15653 356 aa7.43□□□□□ -1.22
SMCHD1-213ENST00000609587 DNAJC14Q6Y2X3 702 aaPredicted RBP7.43□□□□□ -1.22
SMCHD1-213ENST00000609587 ZSCAN29Q8IWY8 852 aaPredicted RBP7.43□□□□□ -1.22
SMCHD1-213ENST00000609587 C2CD4AQ8NCU7 369 aaPredicted RBP7.43□□□□□ -1.22
SMCHD1-213ENST00000609587 SNX29Q8TEQ0 813 aa7.43□□□□□ -1.22
SMCHD1-213ENST00000609587 TBC1D32Q96NH3 1257 aa7.43□□□□□ -1.22
SMCHD1-213ENST00000609587 USP26Q9BXU7 913 aa7.43□□□□□ -1.22
SMCHD1-213ENST00000609587 DZANK1Q9NVP4 752 aa7.43□□□□□ -1.22
SMCHD1-213ENST00000609587 DBX1A6NMT0 343 aa7.42□□□□□ -1.22
SMCHD1-213ENST00000609587 TRPA1O75762 1119 aa7.42□□□□□ -1.22
SMCHD1-213ENST00000609587 DRD2P14416 443 aa7.42□□□□□ -1.22
SMCHD1-213ENST00000609587 ERCC3P19447 782 aa7.42□□□□□ -1.22
SMCHD1-213ENST00000609587 PDE3BQ13370 1112 aa7.42□□□□□ -1.22
SMCHD1-213ENST00000609587 FAM129BQ96TA1 746 aa7.42□□□□□ -1.22
SMCHD1-213ENST00000609587 ZC3H7BQ9UGR2 993 aaKnown RBP7.42□□□□□ -1.22
SMCHD1-213ENST00000609587 PDE2AO00408 941 aaPredicted RBP7.41□□□□□ -1.22
SMCHD1-213ENST00000609587 PHACTR2O75167 634 aa7.41□□□□□ -1.22
SMCHD1-213ENST00000609587 TMC1Q8TDI8 760 aa7.41□□□□□ -1.22
SMCHD1-213ENST00000609587 ASB16Q96NS5 453 aa7.41□□□□□ -1.22
SMCHD1-213ENST00000609587 RBCK1Q9BYM8 510 aa7.41□□□□□ -1.22
SMCHD1-213ENST00000609587 CYP4F12Q9HCS2 524 aa7.41□□□□□ -1.22
SMCHD1-213ENST00000609587 ANKRD33BA6NCL7 494 aa7.4□□□□□ -1.22
SMCHD1-213ENST00000609587 ZNF574Q6ZN55 896 aaPredicted RBP7.4□□□□□ -1.22
SMCHD1-213ENST00000609587 VN1R5Q7Z5H4 357 aa7.4□□□□□ -1.22
SMCHD1-213ENST00000609587 EZH1Q92800 747 aaPredicted RBP7.4□□□□□ -1.22
SMCHD1-213ENST00000609587 ZFYVE28Q9HCC9 887 aa7.4□□□□□ -1.22
SMCHD1-213ENST00000609587 FOXD3Q9UJU5 478 aaPredicted RBP7.4□□□□□ -1.22
SMCHD1-213ENST00000609587 SOX1O00570 391 aaPredicted RBP7.39□□□□□ -1.23
SMCHD1-213ENST00000609587 EREGO14944 169 aa7.39□□□□□ -1.23
SMCHD1-213ENST00000609587 IGHA2P01877 340 aa7.39□□□□□ -1.23
SMCHD1-213ENST00000609587 NEFLP07196 543 aa7.39□□□□□ -1.23
SMCHD1-213ENST00000609587 ARL4DP49703 201 aa7.39□□□□□ -1.23
SMCHD1-213ENST00000609587 USP11P51784 963 aa7.39□□□□□ -1.23
SMCHD1-213ENST00000609587 ZNF792Q3KQV3 632 aa7.39□□□□□ -1.23
SMCHD1-213ENST00000609587 TMC7Q7Z402 723 aa7.39□□□□□ -1.23
SMCHD1-213ENST00000609587 LRRC4CQ9HCJ2 640 aa7.39□□□□□ -1.23
SMCHD1-213ENST00000609587 AMOTL2Q9Y2J4 779 aa7.39□□□□□ -1.23
SMCHD1-213ENST00000609587 EDN3P14138 238 aa7.38□□□□□ -1.23
SMCHD1-213ENST00000609587 ZNF765Q7L2R6 523 aa7.38□□□□□ -1.23
SMCHD1-213ENST00000609587 BCL7CQ8WUZ0 217 aaPredicted RBP7.38□□□□□ -1.23
SMCHD1-213ENST00000609587 IKBKEQ14164 716 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms