RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 CFAP69A5D8W1 941 aa5.4□□□□□ -1.55
HDDC2-208ENST00000609021 ANKRD65E5RJM6 399 aa5.4□□□□□ -1.55
HDDC2-208ENST00000609021 LSM1O15116 133 aaKnown RBP5.4□□□□□ -1.55
HDDC2-208ENST00000609021 HIP1RO75146 1068 aa5.4□□□□□ -1.55
HDDC2-208ENST00000609021 VIMP08670 466 aaKnown RBP5.4□□□□□ -1.55
HDDC2-208ENST00000609021 SMC1AQ14683 1233 aaKnown RBP5.4□□□□□ -1.55
HDDC2-208ENST00000609021 SEPT7Q16181 437 aaKnown RBP5.4□□□□□ -1.55
HDDC2-208ENST00000609021 PARP10Q53GL7 1025 aa5.4□□□□□ -1.55
HDDC2-208ENST00000609021 DRC7Q8IY82 874 aa5.4□□□□□ -1.55
HDDC2-208ENST00000609021 SYCP3Q8IZU3 236 aa5.4□□□□□ -1.55
HDDC2-208ENST00000609021 FNBP4Q8N3X1 1017 aaPredicted RBP5.4□□□□□ -1.55
HDDC2-208ENST00000609021 WDR66Q8TBY9 1149 aa5.4□□□□□ -1.55
HDDC2-208ENST00000609021 DTNBP1Q96EV8 351 aa5.4□□□□□ -1.55
HDDC2-208ENST00000609021 ERO1AQ96HE7 468 aa5.4□□□□□ -1.55
HDDC2-208ENST00000609021 EPSTI1Q96J88 318 aa5.4□□□□□ -1.55
HDDC2-208ENST00000609021 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.4□□□□□ -1.558e-10■■□□□ 11.4
HDDC2-208ENST00000609021 THUMPD2Q9BTF0 503 aaKnown RBP5.4□□□□□ -1.55
HDDC2-208ENST00000609021 TMEM63CQ9P1W3 806 aa5.4□□□□□ -1.55
HDDC2-208ENST00000609021 ZNF142P52746 1687 aaPredicted RBP5.4□□□□□ -1.55
HDDC2-208ENST00000609021 ADAMTSL3P82987 1691 aa5.4□□□□□ -1.55
HDDC2-208ENST00000609021 ZC3H4Q9UPT8 1303 aaKnown RBP5.39□□□□□ -1.55
HDDC2-208ENST00000609021 ROCK2O75116 1388 aaKnown RBP5.39□□□□□ -1.55
HDDC2-208ENST00000609021 SKAP2O75563 359 aaPredicted RBP5.39□□□□□ -1.55
HDDC2-208ENST00000609021 OAS2P29728 719 aaKnown RBP5.39□□□□□ -1.55
HDDC2-208ENST00000609021 ARPC4P59998 168 aa5.39□□□□□ -1.55
HDDC2-208ENST00000609021 ST5P78524 1137 aa5.39□□□□□ -1.55
HDDC2-208ENST00000609021 NSUN2Q08J23 767 aaKnown RBP eCLIP5.39□□□□□ -1.55
HDDC2-208ENST00000609021 BIRC3Q13489 604 aa5.39□□□□□ -1.55
HDDC2-208ENST00000609021 CUL3Q13618 768 aa5.39□□□□□ -1.55
HDDC2-208ENST00000609021 SLFNL1Q499Z3 407 aa5.39□□□□□ -1.55
HDDC2-208ENST00000609021 CAPRIN2Q6IMN6 1127 aaKnown RBP5.39□□□□□ -1.55
HDDC2-208ENST00000609021 CPLX2Q6PUV4 134 aaKnown RBP5.39□□□□□ -1.55
HDDC2-208ENST00000609021 NAP1L3Q99457 506 aaPredicted RBP5.39□□□□□ -1.55
HDDC2-208ENST00000609021 TNMDQ9H2S6 317 aa5.39□□□□□ -1.55
HDDC2-208ENST00000609021 DHX36Q9H2U1 1008 aaKnown RBP5.39□□□□□ -1.55
HDDC2-208ENST00000609021 TSPY26PQ9H489 355 aa5.39□□□□□ -1.55
HDDC2-208ENST00000609021 ZHX3Q9H4I2 956 aa5.39□□□□□ -1.55
HDDC2-208ENST00000609021 ZSCAN16Q9H4T2 348 aaPredicted RBP5.39□□□□□ -1.55
HDDC2-208ENST00000609021 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.39□□□□□ -1.55
HDDC2-208ENST00000609021 UBR1Q8IWV7 1749 aa5.39□□□□□ -1.55
HDDC2-208ENST00000609021 UHRF1BP1Q6BDS2 1440 aa5.39□□□□□ -1.55
HDDC2-208ENST00000609021 CCDC194A0A1B0GVG4 234 aa5.39□□□□□ -1.55
HDDC2-208ENST00000609021 INPP5BP32019 993 aa5.39□□□□□ -1.55
HDDC2-208ENST00000609021 MAGEA10P43363 369 aaPredicted RBP5.39□□□□□ -1.55
HDDC2-208ENST00000609021 RBM6P78332 1123 aaKnown RBP5.39□□□□□ -1.55
HDDC2-208ENST00000609021 COL19A1Q14993 1142 aa5.39□□□□□ -1.55
HDDC2-208ENST00000609021 FBXO38Q6PIJ6 1188 aa5.39□□□□□ -1.55
HDDC2-208ENST00000609021 MFN1Q8IWA4 741 aa5.39□□□□□ -1.55
HDDC2-208ENST00000609021 SLF2Q8IX21 1173 aa5.39□□□□□ -1.55
HDDC2-208ENST00000609021 AFAP1Q8N556 730 aa5.39□□□□□ -1.55
HDDC2-208ENST00000609021 IQUBQ8NA54 791 aa5.39□□□□□ -1.55
HDDC2-208ENST00000609021 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.39□□□□□ -1.55
HDDC2-208ENST00000609021 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.39□□□□□ -1.55
HDDC2-208ENST00000609021 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.39□□□□□ -1.55
HDDC2-208ENST00000609021 COMMD8Q9NX08 183 aa5.39□□□□□ -1.55
HDDC2-208ENST00000609021 BARX2Q9UMQ3 279 aaPredicted RBP5.39□□□□□ -1.55
HDDC2-208ENST00000609021 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.39□□□□□ -1.552e-6■□□□□ 8.7
HDDC2-208ENST00000609021 ARHGEF28Q8N1W1 1705 aaKnown RBP5.39□□□□□ -1.55
HDDC2-208ENST00000609021 EBAG9O00559 213 aa5.39□□□□□ -1.55
HDDC2-208ENST00000609021 NEMFO60524 1076 aa5.39□□□□□ -1.55
HDDC2-208ENST00000609021 PARNO95453 639 aaKnown RBP5.39□□□□□ -1.55
HDDC2-208ENST00000609021 EIF4BP23588 611 aaKnown RBP5.39□□□□□ -1.55
HDDC2-208ENST00000609021 SCNN1BP51168 640 aa5.39□□□□□ -1.55
HDDC2-208ENST00000609021 GNPTABQ3T906 1256 aa5.39□□□□□ -1.55
HDDC2-208ENST00000609021 FKBP15Q5T1M5 1219 aa5.39□□□□□ -1.55
HDDC2-208ENST00000609021 AGAP9Q5VTM2 703 aa5.39□□□□□ -1.55
HDDC2-208ENST00000609021 MCTP1Q6DN14 999 aa5.39□□□□□ -1.55
HDDC2-208ENST00000609021 GIMAP6Q6P9H5 292 aa5.39□□□□□ -1.55
HDDC2-208ENST00000609021 LRSAM1Q6UWE0 723 aa5.39□□□□□ -1.55
HDDC2-208ENST00000609021 NEK10Q6ZWH5 1172 aa5.39□□□□□ -1.55
HDDC2-208ENST00000609021 CCDC146Q8IYE0 955 aa5.39□□□□□ -1.55
HDDC2-208ENST00000609021 NBPF15Q8N660 670 aa5.39□□□□□ -1.55
HDDC2-208ENST00000609021 NAP1L4Q99733 375 aaKnown RBP5.39□□□□□ -1.55
HDDC2-208ENST00000609021 INO80BQ9C086 356 aaPredicted RBP5.39□□□□□ -1.55
HDDC2-208ENST00000609021 LUC7LQ9NQ29 371 aaKnown RBP5.39□□□□□ -1.55
HDDC2-208ENST00000609021 PSD3Q9NYI0 1048 aa5.39□□□□□ -1.55
HDDC2-208ENST00000609021 ITGB1BP2Q9UKP3 347 aa5.39□□□□□ -1.55
HDDC2-208ENST00000609021 WDR37Q9Y2I8 494 aa5.39□□□□□ -1.55
HDDC2-208ENST00000609021 ATP6V0A2Q9Y487 856 aa5.39□□□□□ -1.55
HDDC2-208ENST00000609021 KNDC1Q76NI1 1749 aa5.38□□□□□ -1.55
HDDC2-208ENST00000609021 MARF1Q9Y4F3 1742 aaKnown RBP5.38□□□□□ -1.55
HDDC2-208ENST00000609021 GOLGA6L4A6NEF3 574 aa5.38□□□□□ -1.55
HDDC2-208ENST00000609021 UNCXA6NJT0 531 aa5.38□□□□□ -1.55
HDDC2-208ENST00000609021 PARP1P09874 1014 aaKnown RBP5.38□□□□□ -1.55
HDDC2-208ENST00000609021 PNMA6AP0CW24 399 aaPredicted RBP5.38□□□□□ -1.55
HDDC2-208ENST00000609021 USP5P45974 858 aa5.38□□□□□ -1.55
HDDC2-208ENST00000609021 MRPL12P52815 198 aaKnown RBP5.38□□□□□ -1.55
HDDC2-208ENST00000609021 KCNB1Q14721 858 aa5.38□□□□□ -1.55
HDDC2-208ENST00000609021 WTAPQ15007 396 aa5.38□□□□□ -1.55
HDDC2-208ENST00000609021 ELF2Q15723 593 aa5.38□□□□□ -1.55
HDDC2-208ENST00000609021 CFAP58Q5T655 872 aa5.38□□□□□ -1.55
HDDC2-208ENST00000609021 LMBRD2Q68DH5 695 aaPredicted RBP5.38□□□□□ -1.55
HDDC2-208ENST00000609021 ZCCHC8Q6NZY4 707 aaKnown RBP5.38□□□□□ -1.55
HDDC2-208ENST00000609021 RASSF8Q8NHQ8 419 aa5.38□□□□□ -1.55
HDDC2-208ENST00000609021 UBXN4Q92575 508 aa5.38□□□□□ -1.55
HDDC2-208ENST00000609021 VCX3BQ9H321 246 aa5.38□□□□□ -1.55
HDDC2-208ENST00000609021 KIAA1468Q9P260 1216 aa5.38□□□□□ -1.55
HDDC2-208ENST00000609021 MCM8Q9UJA3 840 aa5.38□□□□□ -1.55
HDDC2-208ENST00000609021 SPATA31D1Q6ZQQ2 1576 aa5.38□□□□□ -1.55
HDDC2-208ENST00000609021 MAPK8IP3Q9UPT6 1336 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 464.2 ms