RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 C22orf23Q9BZE7 217 aa13.91□□□□□ -0.18
CTCFL-221ENST00000608903 RAD50Q92878 1312 aa13.91□□□□□ -0.18
CTCFL-221ENST00000608903 CYP7A1P22680 504 aa13.91□□□□□ -0.18
CTCFL-221ENST00000608903 IARSP41252 1262 aaKnown RBP13.91□□□□□ -0.18
CTCFL-221ENST00000608903 MFSD14BQ5SR56 506 aa13.91□□□□□ -0.18
CTCFL-221ENST00000608903 KIF2CQ99661 725 aa13.91□□□□□ -0.18
CTCFL-221ENST00000608903 TAOK3Q9H2K8 898 aa13.91□□□□□ -0.18
CTCFL-221ENST00000608903 CCDC171Q6TFL3 1326 aa13.9□□□□□ -0.18
CTCFL-221ENST00000608903 REC8O95072 547 aa13.9□□□□□ -0.18
CTCFL-221ENST00000608903 DIXDC1Q155Q3 683 aa13.9□□□□□ -0.18
CTCFL-221ENST00000608903 DACT2Q5SW24 774 aa13.9□□□□□ -0.18
CTCFL-221ENST00000608903 ZSCAN25Q6NSZ9 544 aa13.9□□□□□ -0.18
CTCFL-221ENST00000608903 LARGE2Q8N3Y3 721 aa13.9□□□□□ -0.18
CTCFL-221ENST00000608903 FBXW7Q969H0 707 aa13.9□□□□□ -0.18
CTCFL-221ENST00000608903 CCDC88AQ3V6T2 1871 aa13.9□□□□□ -0.18
CTCFL-221ENST00000608903 G3V3G9 751 aa13.9□□□□□ -0.18
CTCFL-221ENST00000608903 DCAF8Q5TAQ9 597 aa13.9□□□□□ -0.18
CTCFL-221ENST00000608903 MIGA1Q8NAN2 632 aa13.9□□□□□ -0.18
CTCFL-221ENST00000608903 PALD1Q9ULE6 856 aa13.9□□□□□ -0.18
CTCFL-221ENST00000608903 LTBP3Q9NS15 1303 aa13.89□□□□□ -0.19
CTCFL-221ENST00000608903 SRCAPQ6ZRS2 3230 aa13.89□□□□□ -0.19
CTCFL-221ENST00000608903 GPAA1O43292 621 aa13.89□□□□□ -0.19
CTCFL-221ENST00000608903 LDHBP07195 334 aaKnown RBP13.89□□□□□ -0.19
CTCFL-221ENST00000608903 SLC4A3P48751 1232 aa13.89□□□□□ -0.19
CTCFL-221ENST00000608903 RBM25P49756 843 aaKnown RBP13.89□□□□□ -0.19
CTCFL-221ENST00000608903 DYNLL1P63167 89 aaKnown RBP13.89□□□□□ -0.19
CTCFL-221ENST00000608903 NAA16Q6N069 864 aaPredicted RBP13.89□□□□□ -0.19
CTCFL-221ENST00000608903 LCORLQ8N3X6 602 aa13.89□□□□□ -0.19
CTCFL-221ENST00000608903 MAP4K1Q92918 833 aa13.89□□□□□ -0.19
CTCFL-221ENST00000608903 STRBPQ96SI9 672 aaKnown RBP13.89□□□□□ -0.19
CTCFL-221ENST00000608903 ARMT1Q9H993 441 aa13.89□□□□□ -0.19
CTCFL-221ENST00000608903 PSME4Q14997 1843 aa13.89□□□□□ -0.19
CTCFL-221ENST00000608903 RIOK1Q9BRS2 568 aaKnown RBP13.88□□□□□ -0.19
CTCFL-221ENST00000608903 VPS33BQ9H267 617 aa13.88□□□□□ -0.19
CTCFL-221ENST00000608903 TAF6LQ9Y6J9 622 aa13.88□□□□□ -0.19
CTCFL-221ENST00000608903 MAST2Q6P0Q8 1798 aa13.88□□□□□ -0.19
CTCFL-221ENST00000608903 PRKAB2O43741 272 aa13.88□□□□□ -0.19
CTCFL-221ENST00000608903 RAD17O75943 681 aa13.88□□□□□ -0.19
CTCFL-221ENST00000608903 MBD4O95243 580 aa13.88□□□□□ -0.19
CTCFL-221ENST00000608903 HSPD1P10809 573 aaKnown RBP13.88□□□□□ -0.19
CTCFL-221ENST00000608903 LRRFIP1Q32MZ4 808 aaKnown RBP13.88□□□□□ -0.19
CTCFL-221ENST00000608903 STRIP1Q5VSL9 837 aa13.88□□□□□ -0.19
CTCFL-221ENST00000608903 SPTY2D1Q68D10 685 aaPredicted RBP13.88□□□□□ -0.19
CTCFL-221ENST00000608903 ZGPATQ8N5A5 531 aaKnown RBP13.88□□□□□ -0.19
CTCFL-221ENST00000608903 DDRGK1Q96HY6 314 aa13.88□□□□□ -0.19
CTCFL-221ENST00000608903 ADAMTSL1Q8N6G6 1762 aa13.88□□□□□ -0.19
CTCFL-221ENST00000608903 MYH2Q9UKX2 1941 aa13.88□□□□□ -0.19
CTCFL-221ENST00000608903 USP17L3A6NCW0 530 aa13.87□□□□□ -0.19
CTCFL-221ENST00000608903 USP17L4A6NCW7 530 aa13.87□□□□□ -0.19
CTCFL-221ENST00000608903 F8W031 263 aaPredicted RBP13.87□□□□□ -0.19
CTCFL-221ENST00000608903 NECTIN1Q15223 517 aa13.87□□□□□ -0.19
CTCFL-221ENST00000608903 ARHGAP27Q6ZUM4 889 aa13.87□□□□□ -0.19
CTCFL-221ENST00000608903 USP17L1Q7RTZ2 530 aa13.87□□□□□ -0.19
CTCFL-221ENST00000608903 RASEFQ8IZ41 740 aa13.87□□□□□ -0.19
CTCFL-221ENST00000608903 TBC1D22AQ8WUA7 517 aa13.87□□□□□ -0.19
CTCFL-221ENST00000608903 RBM8AQ9Y5S9 174 aaKnown RBP13.87□□□□□ -0.19
CTCFL-221ENST00000608903 PSMD14O00487 310 aa13.87□□□□□ -0.19
CTCFL-221ENST00000608903 HSPA4P34932 840 aa13.87□□□□□ -0.19
CTCFL-221ENST00000608903 KIAA1211Q6ZU35 1233 aa13.87□□□□□ -0.19
CTCFL-221ENST00000608903 DZIP1Q86YF9 867 aaKnown RBP13.87□□□□□ -0.19
CTCFL-221ENST00000608903 ZNRF3Q9ULT6 936 aa13.87□□□□□ -0.19
CTCFL-221ENST00000608903 PCDHAC2Q9Y5I4 1007 aa13.87□□□□□ -0.19
CTCFL-221ENST00000608903 SBF1O95248 1867 aa13.86□□□□□ -0.19
CTCFL-221ENST00000608903 CXCL9Q07325 125 aa13.86□□□□□ -0.19
CTCFL-221ENST00000608903 COL9A3Q14050 684 aaPredicted RBP13.86□□□□□ -0.19
CTCFL-221ENST00000608903 NIM1KQ8IY84 436 aa13.86□□□□□ -0.19
CTCFL-221ENST00000608903 UPF2Q9HAU5 1272 aaKnown RBP13.86□□□□□ -0.19
CTCFL-221ENST00000608903 VIL1P09327 827 aaKnown RBP13.85□□□□□ -0.19
CTCFL-221ENST00000608903 SCNN1DP51172 638 aa13.85□□□□□ -0.19
CTCFL-221ENST00000608903 FKBP1AP62942 108 aaKnown RBP13.85□□□□□ -0.19
CTCFL-221ENST00000608903 KCNB2Q92953 911 aa13.85□□□□□ -0.19
CTCFL-221ENST00000608903 GMLQ99445 158 aa13.85□□□□□ -0.19
CTCFL-221ENST00000608903 EPB41L4AQ9HCS5 686 aaPredicted RBP13.85□□□□□ -0.19
CTCFL-221ENST00000608903 AATFQ9NY61 560 aaKnown RBP eCLIP13.85□□□□□ -0.19
CTCFL-221ENST00000608903 MAGEB6P1A0A0J9YX57 407 aa13.85□□□□□ -0.19
CTCFL-221ENST00000608903 GSG1L2A8MUP6 293 aa13.85□□□□□ -0.19
CTCFL-221ENST00000608903 KIAA0825Q8IV33 1275 aa13.85□□□□□ -0.19
CTCFL-221ENST00000608903 AIDAQ96BJ3 306 aa13.85□□□□□ -0.19
CTCFL-221ENST00000608903 DSCC1Q9BVC3 393 aa13.85□□□□□ -0.19
CTCFL-221ENST00000608903 TTF2Q9UNY4 1162 aaKnown RBP13.85□□□□□ -0.19
CTCFL-221ENST00000608903 ZBTB12Q9Y330 459 aaPredicted RBP13.85□□□□□ -0.19
CTCFL-221ENST00000608903 GAKO14976 1311 aa13.85□□□□□ -0.19
CTCFL-221ENST00000608903 EPB41L2O43491 1005 aaKnown RBP13.84□□□□□ -0.19
CTCFL-221ENST00000608903 FGAP02671 866 aa13.84□□□□□ -0.19
CTCFL-221ENST00000608903 FAM163AQ96GL9 167 aaPredicted RBP13.84□□□□□ -0.19
CTCFL-221ENST00000608903 SUGT1Q9Y2Z0 365 aa13.84□□□□□ -0.19
CTCFL-221ENST00000608903 DAGLAQ9Y4D2 1042 aa13.84□□□□□ -0.19
CTCFL-221ENST00000608903 SNX14Q9Y5W7 946 aa13.84□□□□□ -0.19
CTCFL-221ENST00000608903 MROH7-TTC4A0A0A0MT08 1334 aa13.84□□□□□ -0.19
CTCFL-221ENST00000608903 SMIM22K7EJ46 135 aa13.84□□□□□ -0.19
CTCFL-221ENST00000608903 SLC27A2O14975 620 aa13.84□□□□□ -0.19
CTCFL-221ENST00000608903 CREB3L3Q68CJ9 461 aa13.84□□□□□ -0.19
CTCFL-221ENST00000608903 RSBN1LQ6PCB5 846 aaPredicted RBP13.84□□□□□ -0.19
CTCFL-221ENST00000608903 SDR42E1Q8WUS8 393 aa13.84□□□□□ -0.19
CTCFL-221ENST00000608903 GPR75-ASB3A0A0A6YYF3 556 aa13.83□□□□□ -0.2
CTCFL-221ENST00000608903 PATL2C9JE40 543 aaKnown RBP13.83□□□□□ -0.2
CTCFL-221ENST00000608903 FZD9O00144 591 aa13.83□□□□□ -0.2
CTCFL-221ENST00000608903 PPP4CP60510 307 aa13.83□□□□□ -0.2
CTCFL-221ENST00000608903 SH3RF3Q8TEJ3 882 aaPredicted RBP13.83□□□□□ -0.2
CTCFL-221ENST00000608903 IL17RAQ96F46 866 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms