RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 ERICH6Q7L0X2 663 aa17.4■□□□□ 0.38
CTSA-219ENST00000607841 SLF2Q8IX21 1173 aa17.4■□□□□ 0.38
CTSA-219ENST00000607841 TEKT1Q969V4 418 aa17.4■□□□□ 0.38
CTSA-219ENST00000607841 DCPSQ96C86 337 aaKnown RBP17.4■□□□□ 0.38
CTSA-219ENST00000607841 SNRKQ9NRH2 765 aa17.4■□□□□ 0.38
CTSA-219ENST00000607841 WNT10BO00744 389 aa17.39■□□□□ 0.37
CTSA-219ENST00000607841 ATP5JP18859 108 aa17.39■□□□□ 0.37
CTSA-219ENST00000607841 PRDX5P30044 214 aa17.39■□□□□ 0.37
CTSA-219ENST00000607841 CRKP46108 304 aa17.39■□□□□ 0.37
CTSA-219ENST00000607841 GRIK5Q16478 980 aa17.39■□□□□ 0.37
CTSA-219ENST00000607841 MAP1SQ66K74 1059 aaPredicted RBP17.39■□□□□ 0.37
CTSA-219ENST00000607841 PI16Q6UXB8 463 aa17.39■□□□□ 0.37
CTSA-219ENST00000607841 DZIP1Q86YF9 867 aaKnown RBP17.39■□□□□ 0.37
CTSA-219ENST00000607841 CNTROBQ8N137 903 aa17.39■□□□□ 0.37
CTSA-219ENST00000607841 ECHDC1Q9NTX5 307 aa17.39■□□□□ 0.37
CTSA-219ENST00000607841 LRP2BPQ9P2M1 347 aa17.39■□□□□ 0.37
CTSA-219ENST00000607841 SPDYE2BA6NHP3 402 aa17.38■□□□□ 0.37
CTSA-219ENST00000607841 SPDYE6P0CI01 402 aa17.38■□□□□ 0.37
CTSA-219ENST00000607841 ZAP70P43403 619 aa17.38■□□□□ 0.37
CTSA-219ENST00000607841 TTF1Q15361 905 aaPredicted RBP17.38■□□□□ 0.37
CTSA-219ENST00000607841 B4GALNT3Q6L9W6 998 aa17.38■□□□□ 0.37
CTSA-219ENST00000607841 HHIPL2Q6UWX4 724 aa17.38■□□□□ 0.37
CTSA-219ENST00000607841 CDC37L1Q7L3B6 337 aa17.38■□□□□ 0.37
CTSA-219ENST00000607841 RAI14Q9P0K7 980 aa17.38■□□□□ 0.37
CTSA-219ENST00000607841 CYP2E1P05181 493 aaPredicted RBP17.37■□□□□ 0.37
CTSA-219ENST00000607841 GSTO1P78417 241 aa17.37■□□□□ 0.37
CTSA-219ENST00000607841 NBPF9Q3BBW0 867 aa17.37■□□□□ 0.37
CTSA-219ENST00000607841 ANGEL2Q5VTE6 544 aaKnown RBP17.37■□□□□ 0.37
CTSA-219ENST00000607841 TBC1D9Q6ZT07 1266 aa17.37■□□□□ 0.37
CTSA-219ENST00000607841 ZBED3Q96IU2 234 aaPredicted RBP17.37■□□□□ 0.37
CTSA-219ENST00000607841 ZDHHC15Q96MV8 337 aa17.37■□□□□ 0.37
CTSA-219ENST00000607841 GGA3Q9NZ52 723 aa17.37■□□□□ 0.37
CTSA-219ENST00000607841 TTC41PQ6P2S7 1318 aa17.37■□□□□ 0.37
CTSA-219ENST00000607841 PITPNM2Q9BZ72 1349 aa17.37■□□□□ 0.37
CTSA-219ENST00000607841 ERC2O15083 957 aa17.36■□□□□ 0.37
CTSA-219ENST00000607841 LDHCP07864 332 aa17.36■□□□□ 0.37
CTSA-219ENST00000607841 NUCB1Q02818 461 aa17.36■□□□□ 0.37
CTSA-219ENST00000607841 CHD1LQ86WJ1 897 aa17.36■□□□□ 0.37
CTSA-219ENST00000607841 SULF1Q8IWU6 871 aa17.36■□□□□ 0.37
CTSA-219ENST00000607841 PRMT6Q96LA8 375 aaPredicted RBP17.36■□□□□ 0.37
CTSA-219ENST00000607841 BOLA2Q9H3K6 86 aa17.36■□□□□ 0.37
CTSA-219ENST00000607841 ZNF646O15015 1829 aaPredicted RBP17.35■□□□□ 0.37
CTSA-219ENST00000607841 MECOMQ03112 1051 aa17.35■□□□□ 0.37
CTSA-219ENST00000607841 TMED8Q6PL24 325 aaPredicted RBP17.35■□□□□ 0.37
CTSA-219ENST00000607841 KRT26Q7Z3Y9 468 aa17.35■□□□□ 0.37
CTSA-219ENST00000607841 APOBEC3FQ8IUX4 373 aaKnown RBP17.35■□□□□ 0.37
CTSA-219ENST00000607841 DNAJC2Q99543 621 aaKnown RBP17.35■□□□□ 0.37
CTSA-219ENST00000607841 HAUS7Q99871 368 aa17.35■□□□□ 0.37
CTSA-219ENST00000607841 LNPKQ9C0E8 428 aa17.35■□□□□ 0.37
CTSA-219ENST00000607841 ITGBL1O95965 494 aaPredicted RBP17.34■□□□□ 0.37
CTSA-219ENST00000607841 MX1P20591 662 aa17.34■□□□□ 0.37
CTSA-219ENST00000607841 MAP3K12Q12852 859 aa17.34■□□□□ 0.37
CTSA-219ENST00000607841 DIXDC1Q155Q3 683 aa17.34■□□□□ 0.37
CTSA-219ENST00000607841 NSUN4Q96CB9 384 aaKnown RBP17.34■□□□□ 0.37
CTSA-219ENST00000607841 FAM163AQ96GL9 167 aaPredicted RBP17.34■□□□□ 0.37
CTSA-219ENST00000607841 ASTN2O75129 1339 aaPredicted RBP17.33■□□□□ 0.36
CTSA-219ENST00000607841 GOLIM4O00461 696 aa17.33■□□□□ 0.36
CTSA-219ENST00000607841 IDH1O75874 414 aaKnown RBP17.33■□□□□ 0.36
CTSA-219ENST00000607841 GLRX3O76003 335 aaKnown RBP17.33■□□□□ 0.36
CTSA-219ENST00000607841 ERICH6BQ5W0A0 696 aa17.33■□□□□ 0.36
CTSA-219ENST00000607841 NAA16Q6N069 864 aaPredicted RBP17.33■□□□□ 0.36
CTSA-219ENST00000607841 APOBEC3HQ6NTF7 200 aaKnown RBP17.33■□□□□ 0.36
CTSA-219ENST00000607841 USP48Q86UV5 1035 aa17.33■□□□□ 0.36
CTSA-219ENST00000607841 GLIS2Q9BZE0 524 aaPredicted RBP17.33■□□□□ 0.36
CTSA-219ENST00000607841 PIH1D3Q9NQM4 214 aaKnown RBP17.33■□□□□ 0.36
CTSA-219ENST00000607841 PAG1Q9NWQ8 432 aa17.33■□□□□ 0.36
CTSA-219ENST00000607841 TMOD2Q9NZR1 351 aa17.33■□□□□ 0.36
CTSA-219ENST00000607841 DAGLAQ9Y4D2 1042 aa17.33■□□□□ 0.36
CTSA-219ENST00000607841 PCDHAC2Q9Y5I4 1007 aa17.33■□□□□ 0.36
CTSA-219ENST00000607841 NDUFB9Q9Y6M9 179 aa17.33■□□□□ 0.36
CTSA-219ENST00000607841 ADAMTSL1Q8N6G6 1762 aa17.33■□□□□ 0.36
CTSA-219ENST00000607841 GAKO14976 1311 aa17.32■□□□□ 0.36
CTSA-219ENST00000607841 CLRN2A0PK11 232 aa17.32■□□□□ 0.36
CTSA-219ENST00000607841 TNFAIP1Q13829 316 aa17.32■□□□□ 0.36
CTSA-219ENST00000607841 SPDYE2Q495Y8 402 aa17.32■□□□□ 0.36
CTSA-219ENST00000607841 NOL10Q9BSC4 688 aaKnown RBP17.32■□□□□ 0.36
CTSA-219ENST00000607841 ANTXR1Q9H6X2 564 aa17.32■□□□□ 0.36
CTSA-219ENST00000607841 TDRD3Q9H7E2 651 aaKnown RBP17.32■□□□□ 0.36
CTSA-219ENST00000607841 VEZTQ9HBM0 779 aa17.32■□□□□ 0.36
CTSA-219ENST00000607841 MROH7-TTC4A0A0A0MT08 1334 aa17.31■□□□□ 0.36
CTSA-219ENST00000607841 OTUD7AQ8TE49 926 aaPredicted RBP17.31■□□□□ 0.36
CTSA-219ENST00000607841 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.31■□□□□ 0.36
CTSA-219ENST00000607841 ZNF70Q9UC06 446 aaPredicted RBP17.31■□□□□ 0.36
CTSA-219ENST00000607841 STAP2Q9UGK3 403 aa17.31■□□□□ 0.36
CTSA-219ENST00000607841 PASKQ96RG2 1323 aa17.3■□□□□ 0.36
CTSA-219ENST00000607841 SALL3Q9BXA9 1300 aa17.3■□□□□ 0.36
CTSA-219ENST00000607841 MYH13Q9UKX3 1938 aa17.3■□□□□ 0.36
CTSA-219ENST00000607841 GPR75-ASB3A0A0A6YYF3 556 aa17.3■□□□□ 0.36
CTSA-219ENST00000607841 BAG3O95817 575 aa17.3■□□□□ 0.36
CTSA-219ENST00000607841 MAP4K4O95819 1239 aaPredicted RBP17.3■□□□□ 0.36
CTSA-219ENST00000607841 TNNI2P48788 182 aa17.3■□□□□ 0.36
CTSA-219ENST00000607841 TSHZ3Q63HK5 1081 aa17.3■□□□□ 0.36
CTSA-219ENST00000607841 CENPQQ7L2Z9 268 aaPredicted RBP17.3■□□□□ 0.36
CTSA-219ENST00000607841 CCDC136Q96JN2 1154 aa17.3■□□□□ 0.36
CTSA-219ENST00000607841 USP40Q9NVE5 1235 aa17.3■□□□□ 0.36
CTSA-219ENST00000607841 PPP2R3BQ9Y5P8 575 aa17.3■□□□□ 0.36
CTSA-219ENST00000607841 ADM5C9JUS6 153 aa17.29■□□□□ 0.36
CTSA-219ENST00000607841 BTDP43251 543 aa17.29■□□□□ 0.36
CTSA-219ENST00000607841 APLP1P51693 650 aa17.29■□□□□ 0.36
CTSA-219ENST00000607841 PDE1AP54750 535 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms