RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 LRRC24Q50LG9 513 aa18.67■□□□□ 0.58
CTSA-216ENST00000607212 CSADQ9Y600 493 aa18.67■□□□□ 0.58
CTSA-216ENST00000607212 CRHR2Q13324 411 aa18.66■□□□□ 0.58
CTSA-216ENST00000607212 CD99L2Q8TCZ2 262 aa18.66■□□□□ 0.58
CTSA-216ENST00000607212 TBC1D22AQ8WUA7 517 aa18.66■□□□□ 0.58
CTSA-216ENST00000607212 TMEM39BQ9GZU3 492 aa18.66■□□□□ 0.58
CTSA-216ENST00000607212 RIPOR2Q9Y4F9 1068 aa18.66■□□□□ 0.58
CTSA-216ENST00000607212 GJA5P36382 358 aa18.65■□□□□ 0.58
CTSA-216ENST00000607212 PRPF38BQ5VTL8 546 aaKnown RBP18.65■□□□□ 0.58
CTSA-216ENST00000607212 OTOP1Q7RTM1 612 aa18.65■□□□□ 0.58
CTSA-216ENST00000607212 MRPL50Q8N5N7 158 aaKnown RBP18.65■□□□□ 0.58
CTSA-216ENST00000607212 TEKT1Q969V4 418 aa18.65■□□□□ 0.58
CTSA-216ENST00000607212 KAZALD1Q96I82 304 aa18.65■□□□□ 0.58
CTSA-216ENST00000607212 IFIT1P09914 478 aaKnown RBP18.64■□□□□ 0.57
CTSA-216ENST00000607212 CACNB3P54284 484 aa18.64■□□□□ 0.57
CTSA-216ENST00000607212 MAP3K9P80192 1104 aa18.64■□□□□ 0.57
CTSA-216ENST00000607212 KLHDC4Q8TBB5 520 aa18.64■□□□□ 0.57
CTSA-216ENST00000607212 MYH13Q9UKX3 1938 aa18.64■□□□□ 0.57
CTSA-216ENST00000607212 AK9Q5TCS8 1911 aa18.63■□□□□ 0.57
CTSA-216ENST00000607212 WDHD1O75717 1129 aaPredicted RBP18.63■□□□□ 0.57
CTSA-216ENST00000607212 SP3Q02447 781 aa18.63■□□□□ 0.57
CTSA-216ENST00000607212 FBXO33Q7Z6M2 555 aa18.63■□□□□ 0.57
CTSA-216ENST00000607212 CDAN1Q8IWY9 1227 aa18.63■□□□□ 0.57
CTSA-216ENST00000607212 ANKRD44Q8N8A2 993 aa18.63■□□□□ 0.57
CTSA-216ENST00000607212 OTUD5Q96G74 571 aa18.63■□□□□ 0.57
CTSA-216ENST00000607212 EFCC1Q9HA90 598 aa18.63■□□□□ 0.57
CTSA-216ENST00000607212 PTPRCP08575 1304 aa18.63■□□□□ 0.57
CTSA-216ENST00000607212 LAMB1P07942 1786 aa18.63■□□□□ 0.57
CTSA-216ENST00000607212 CCL15-CCL14A0A0B4J2E2 113 aa18.62■□□□□ 0.57
CTSA-216ENST00000607212 PDE8BO95263 885 aa18.62■□□□□ 0.57
CTSA-216ENST00000607212 BCAMP50895 628 aa18.62■□□□□ 0.57
CTSA-216ENST00000607212 VGLL4Q14135 290 aa18.62■□□□□ 0.57
CTSA-216ENST00000607212 TAF1CQ15572 869 aaPredicted RBP18.62■□□□□ 0.57
CTSA-216ENST00000607212 GRIK5Q16478 980 aa18.62■□□□□ 0.57
CTSA-216ENST00000607212 CCL15Q16663 113 aa18.62■□□□□ 0.57
CTSA-216ENST00000607212 CNKSR2Q8WXI2 1034 aa18.62■□□□□ 0.57
CTSA-216ENST00000607212 UTYO14607 1347 aa18.62■□□□□ 0.57
CTSA-216ENST00000607212 MAST3O60307 1309 aa18.62■□□□□ 0.57
CTSA-216ENST00000607212 E9PSI1 815 aa18.61■□□□□ 0.57
CTSA-216ENST00000607212 GTF2A2P52657 109 aa18.61■□□□□ 0.57
CTSA-216ENST00000607212 PUM3Q15397 648 aaKnown RBP18.61■□□□□ 0.57
CTSA-216ENST00000607212 RABL6Q3YEC7 729 aaPredicted RBP18.61■□□□□ 0.57
CTSA-216ENST00000607212 TEPSINQ96N21 525 aa18.61■□□□□ 0.57
CTSA-216ENST00000607212 PTPN18Q99952 460 aa18.61■□□□□ 0.57
CTSA-216ENST00000607212 ZFYVE28Q9HCC9 887 aa18.61■□□□□ 0.57
CTSA-216ENST00000607212 SLC5A1P13866 664 aa18.6■□□□□ 0.57
CTSA-216ENST00000607212 HDLBPQ00341 1268 aaKnown RBP18.6■□□□□ 0.57
CTSA-216ENST00000607212 ARHGEF6Q15052 776 aa18.6■□□□□ 0.57
CTSA-216ENST00000607212 INTS3Q68E01 1043 aaKnown RBP18.6■□□□□ 0.57
CTSA-216ENST00000607212 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.6■□□□□ 0.57
CTSA-216ENST00000607212 SSH1Q8WYL5 1049 aa18.6■□□□□ 0.57
CTSA-216ENST00000607212 HOOK2Q96ED9 719 aa18.6■□□□□ 0.57
CTSA-216ENST00000607212 PTPN22Q9Y2R2 807 aa18.6■□□□□ 0.57
CTSA-216ENST00000607212 TNRC18O15417 2968 aaPredicted RBP18.59■□□□□ 0.57
CTSA-216ENST00000607212 WRNIP1Q96S55 665 aa18.59■□□□□ 0.57
CTSA-216ENST00000607212 TESPA1A2RU30 521 aaPredicted RBP18.58■□□□□ 0.56
CTSA-216ENST00000607212 DCAF15Q66K64 600 aa18.58■□□□□ 0.56
CTSA-216ENST00000607212 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.58■□□□□ 0.56
CTSA-216ENST00000607212 BRI3BPQ8WY22 251 aa18.58■□□□□ 0.56
CTSA-216ENST00000607212 SMC4Q9NTJ3 1288 aa18.58■□□□□ 0.56
CTSA-216ENST00000607212 ZNF521Q96K83 1311 aa18.57■□□□□ 0.56
CTSA-216ENST00000607212 EYA2O00167 538 aa18.57■□□□□ 0.56
CTSA-216ENST00000607212 VGLL2Q8N8G2 317 aa18.57■□□□□ 0.56
CTSA-216ENST00000607212 ZDHHC15Q96MV8 337 aa18.57■□□□□ 0.56
CTSA-216ENST00000607212 TMEM106CQ9BVX2 250 aa18.57■□□□□ 0.56
CTSA-216ENST00000607212 USP44Q9H0E7 712 aa18.57■□□□□ 0.56
CTSA-216ENST00000607212 SIL1Q9H173 461 aa18.57■□□□□ 0.56
CTSA-216ENST00000607212 POTEFA5A3E0 1075 aa18.56■□□□□ 0.56
CTSA-216ENST00000607212 ECM2O94769 699 aaPredicted RBP18.56■□□□□ 0.56
CTSA-216ENST00000607212 KIF22Q14807 665 aa18.56■□□□□ 0.56
CTSA-216ENST00000607212 WDR66Q8TBY9 1149 aa18.56■□□□□ 0.56
CTSA-216ENST00000607212 ZKSCAN4Q969J2 545 aaPredicted RBP18.56■□□□□ 0.56
CTSA-216ENST00000607212 MS4A4AQ96JQ5 239 aa18.56■□□□□ 0.56
CTSA-216ENST00000607212 SUGT1Q9Y2Z0 365 aa18.56■□□□□ 0.56
CTSA-216ENST00000607212 SPDYE5A6NIY4 337 aa18.55■□□□□ 0.56
CTSA-216ENST00000607212 UBTFL1P0CB47 393 aaPredicted RBP18.55■□□□□ 0.56
CTSA-216ENST00000607212 CETPP11597 493 aa18.55■□□□□ 0.56
CTSA-216ENST00000607212 MIGA2Q7L4E1 593 aa18.55■□□□□ 0.56
CTSA-216ENST00000607212 FAM83AQ86UY5 434 aa18.55■□□□□ 0.56
CTSA-216ENST00000607212 ERO1BQ86YB8 467 aa18.55■□□□□ 0.56
CTSA-216ENST00000607212 FAM43AQ8N2R8 423 aa18.55■□□□□ 0.56
CTSA-216ENST00000607212 LPIN2Q92539 896 aa18.55■□□□□ 0.56
CTSA-216ENST00000607212 ZNF341Q9BYN7 854 aa18.55■□□□□ 0.56
CTSA-216ENST00000607212 GNL3LQ9NVN8 582 aaKnown RBP18.55■□□□□ 0.56
CTSA-216ENST00000607212 MYCP01106 439 aaPredicted RBP18.54■□□□□ 0.56
CTSA-216ENST00000607212 TCP10Q12799 353 aa18.54■□□□□ 0.56
CTSA-216ENST00000607212 SNAPC2Q13487 334 aa18.54■□□□□ 0.56
CTSA-216ENST00000607212 SLC9C1Q4G0N8 1177 aa18.54■□□□□ 0.56
CTSA-216ENST00000607212 NBPF11Q86T75 865 aa18.54■□□□□ 0.56
CTSA-216ENST00000607212 SNCAIPQ9Y6H5 919 aa18.54■□□□□ 0.56
CTSA-216ENST00000607212 KIF16BQ96L93 1317 aa18.53■□□□□ 0.56
CTSA-216ENST00000607212 FGFR2P21802 821 aa18.53■□□□□ 0.56
CTSA-216ENST00000607212 SLFN5Q08AF3 891 aa18.53■□□□□ 0.56
CTSA-216ENST00000607212 ATP2B3Q16720 1220 aa18.53■□□□□ 0.56
CTSA-216ENST00000607212 SLC4A8Q2Y0W8 1093 aa18.53■□□□□ 0.56
CTSA-216ENST00000607212 ALDH1L2Q3SY69 923 aa18.53■□□□□ 0.56
CTSA-216ENST00000607212 APOBEC3HQ6NTF7 200 aaKnown RBP18.53■□□□□ 0.56
CTSA-216ENST00000607212 HHIPL2Q6UWX4 724 aa18.53■□□□□ 0.56
CTSA-216ENST00000607212 MRIQ9BWK5 157 aa18.53■□□□□ 0.56
CTSA-216ENST00000607212 CEP126Q9P2H0 1117 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms