RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 USP48Q86UV5 1035 aa12.41□□□□□ -0.42
CTSA-215ENST00000607187 VPS37DQ86XT2 251 aa12.41□□□□□ -0.42
CTSA-215ENST00000607187 LPIN2Q92539 896 aa12.41□□□□□ -0.42
CTSA-215ENST00000607187 GGA3Q9NZ52 723 aa12.41□□□□□ -0.42
CTSA-215ENST00000607187 MKRN1Q9UHC7 482 aaKnown RBP12.41□□□□□ -0.42
CTSA-215ENST00000607187 HDAC9Q9UKV0 1011 aa12.41□□□□□ -0.42
CTSA-215ENST00000607187 PITPNM2Q9BZ72 1349 aa12.4□□□□□ -0.42
CTSA-215ENST00000607187 WNT10BO00744 389 aa12.4□□□□□ -0.42
CTSA-215ENST00000607187 ZBTB7BO15156 539 aaPredicted RBP12.4□□□□□ -0.42
CTSA-215ENST00000607187 CELF2O95319 508 aaKnown RBP12.4□□□□□ -0.42
CTSA-215ENST00000607187 IFIT1P09914 478 aaKnown RBP12.4□□□□□ -0.42
CTSA-215ENST00000607187 NBPF9Q3BBW0 867 aa12.4□□□□□ -0.42
CTSA-215ENST00000607187 ANGEL2Q5VTE6 544 aaKnown RBP12.4□□□□□ -0.42
CTSA-215ENST00000607187 ITPRIPQ8IWB1 547 aa12.4□□□□□ -0.42
CTSA-215ENST00000607187 SULF1Q8IWU6 871 aa12.4□□□□□ -0.42
CTSA-215ENST00000607187 ZBED3Q96IU2 234 aaPredicted RBP12.4□□□□□ -0.42
CTSA-215ENST00000607187 CEP126Q9P2H0 1117 aa12.4□□□□□ -0.42
CTSA-215ENST00000607187 JAG2Q9Y219 1238 aa12.4□□□□□ -0.42
CTSA-215ENST00000607187 PNMA6EA0A0J9YXQ4 647 aa12.39□□□□□ -0.43
CTSA-215ENST00000607187 ADM5C9JUS6 153 aa12.39□□□□□ -0.43
CTSA-215ENST00000607187 SLC5A1P13866 664 aa12.39□□□□□ -0.43
CTSA-215ENST00000607187 BCAMP50895 628 aa12.39□□□□□ -0.43
CTSA-215ENST00000607187 MFSD14BQ5SR56 506 aa12.39□□□□□ -0.43
CTSA-215ENST00000607187 DLK2Q6UY11 383 aa12.39□□□□□ -0.43
CTSA-215ENST00000607187 MTMR14Q8NCE2 650 aa12.39□□□□□ -0.43
CTSA-215ENST00000607187 RCAN3Q9UKA8 241 aa12.39□□□□□ -0.43
CTSA-215ENST00000607187 ABT1Q9ULW3 272 aaKnown RBP12.39□□□□□ -0.43
CTSA-215ENST00000607187 TLL2Q9Y6L7 1015 aa12.39□□□□□ -0.43
CTSA-215ENST00000607187 MS4A1P11836 297 aa12.38□□□□□ -0.43
CTSA-215ENST00000607187 ATP2B3Q16720 1220 aa12.38□□□□□ -0.43
CTSA-215ENST00000607187 DEFB115Q30KQ5 88 aa12.38□□□□□ -0.43
CTSA-215ENST00000607187 SAPCD2Q86UD0 394 aa12.38□□□□□ -0.43
CTSA-215ENST00000607187 PANK1Q8TE04 598 aa12.38□□□□□ -0.43
CTSA-215ENST00000607187 IQSEC3Q9UPP2 1182 aaPredicted RBP12.38□□□□□ -0.43
CTSA-215ENST00000607187 F8W031 263 aaPredicted RBP12.37□□□□□ -0.43
CTSA-215ENST00000607187 FRAT2O75474 233 aaPredicted RBP12.37□□□□□ -0.43
CTSA-215ENST00000607187 VEGFBP49765 207 aa12.37□□□□□ -0.43
CTSA-215ENST00000607187 DLGAP5Q15398 846 aa12.37□□□□□ -0.43
CTSA-215ENST00000607187 CRISPLD2Q9H0B8 497 aa12.37□□□□□ -0.43
CTSA-215ENST00000607187 ZNF408Q9H9D4 720 aa12.37□□□□□ -0.43
CTSA-215ENST00000607187 ATP8B2P98198 1209 aa12.36□□□□□ -0.43
CTSA-215ENST00000607187 SSH3Q8TE77 659 aa12.36□□□□□ -0.43
CTSA-215ENST00000607187 TBC1D22AQ8WUA7 517 aa12.36□□□□□ -0.43
CTSA-215ENST00000607187 CDCA5Q96FF9 252 aa12.36□□□□□ -0.43
CTSA-215ENST00000607187 DDX27Q96GQ7 796 aaKnown RBP12.36□□□□□ -0.43
CTSA-215ENST00000607187 HHIPL1Q96JK4 782 aa12.36□□□□□ -0.43
CTSA-215ENST00000607187 C1orf115Q9H7X2 142 aa12.36□□□□□ -0.43
CTSA-215ENST00000607187 TTF2Q9UNY4 1162 aaKnown RBP12.36□□□□□ -0.43
CTSA-215ENST00000607187 PCDHAC2Q9Y5I4 1007 aa12.36□□□□□ -0.43
CTSA-215ENST00000607187 TFCP2Q12800 502 aa12.35□□□□□ -0.43
CTSA-215ENST00000607187 CHAF1AQ13111 956 aaPredicted RBP12.35□□□□□ -0.43
CTSA-215ENST00000607187 CFAP100Q494V2 611 aa12.35□□□□□ -0.43
CTSA-215ENST00000607187 PRMT6Q96LA8 375 aaPredicted RBP12.35□□□□□ -0.43
CTSA-215ENST00000607187 GBA2Q9HCG7 927 aaPredicted RBP12.35□□□□□ -0.43
CTSA-215ENST00000607187 SERPINA10Q9UK55 444 aa12.35□□□□□ -0.43
CTSA-215ENST00000607187 SCAF8Q9UPN6 1271 aaKnown RBP12.35□□□□□ -0.43
CTSA-215ENST00000607187 AKAP2Q9Y2D5 859 aa12.35□□□□□ -0.43
CTSA-215ENST00000607187 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.35□□□□□ -0.43
CTSA-215ENST00000607187 THSD7BQ9C0I4 1608 aa12.35□□□□□ -0.43
CTSA-215ENST00000607187 WDR33Q9C0J8 1336 aaKnown RBP12.35□□□□□ -0.43
CTSA-215ENST00000607187 COL1A1P02452 1464 aaPredicted RBP12.34□□□□□ -0.43
CTSA-215ENST00000607187 PAPPA2Q9BXP8 1791 aa12.34□□□□□ -0.43
CTSA-215ENST00000607187 A0A1B0GUL7 405 aa12.34□□□□□ -0.43
CTSA-215ENST00000607187 MAP3K13O43283 966 aa12.34□□□□□ -0.43
CTSA-215ENST00000607187 ADORA1P30542 326 aa12.34□□□□□ -0.43
CTSA-215ENST00000607187 ECE1P42892 770 aa12.34□□□□□ -0.43
CTSA-215ENST00000607187 TIMM10P62072 90 aa12.34□□□□□ -0.43
CTSA-215ENST00000607187 G3BP1Q13283 466 aaKnown RBP eCLIP12.34□□□□□ -0.43
CTSA-215ENST00000607187 CAMK2BQ13554 666 aa12.34□□□□□ -0.43
CTSA-215ENST00000607187 MVPQ14764 893 aaKnown RBP12.34□□□□□ -0.43
CTSA-215ENST00000607187 GRIK5Q16478 980 aa12.34□□□□□ -0.43
CTSA-215ENST00000607187 CYP4F22Q6NT55 531 aa12.34□□□□□ -0.43
CTSA-215ENST00000607187 APOBEC3FQ8IUX4 373 aaKnown RBP12.34□□□□□ -0.43
CTSA-215ENST00000607187 C2orf69Q8N8R5 385 aa12.34□□□□□ -0.43
CTSA-215ENST00000607187 CAPNS2Q96L46 248 aa12.34□□□□□ -0.43
CTSA-215ENST00000607187 GNL3LQ9NVN8 582 aaKnown RBP12.34□□□□□ -0.43
CTSA-215ENST00000607187 SUGT1Q9Y2Z0 365 aa12.34□□□□□ -0.43
CTSA-215ENST00000607187 MYO1BO43795 1136 aa12.33□□□□□ -0.44
CTSA-215ENST00000607187 PHKA1P46020 1223 aa12.33□□□□□ -0.44
CTSA-215ENST00000607187 RBM5P52756 815 aaKnown RBP eCLIP12.33□□□□□ -0.44
CTSA-215ENST00000607187 HUNKP57058 714 aa12.33□□□□□ -0.44
CTSA-215ENST00000607187 HDLBPQ00341 1268 aaKnown RBP12.33□□□□□ -0.44
CTSA-215ENST00000607187 CCDC102BQ68D86 513 aa12.33□□□□□ -0.44
CTSA-215ENST00000607187 CEP85Q6P2H3 762 aa12.33□□□□□ -0.44
CTSA-215ENST00000607187 GPIHBP1Q8IV16 184 aa12.33□□□□□ -0.44
CTSA-215ENST00000607187 KRI1Q8N9T8 703 aaKnown RBP12.33□□□□□ -0.44
CTSA-215ENST00000607187 IL27Q8NEV9 243 aa12.33□□□□□ -0.44
CTSA-215ENST00000607187 WDR66Q8TBY9 1149 aa12.33□□□□□ -0.44
CTSA-215ENST00000607187 XAGE2Q96GT9 111 aa12.33□□□□□ -0.44
CTSA-215ENST00000607187 MS4A4AQ96JQ5 239 aa12.33□□□□□ -0.44
CTSA-215ENST00000607187 MRIQ9BWK5 157 aa12.33□□□□□ -0.44
CTSA-215ENST00000607187 DDX19BQ9UMR2 479 aa12.33□□□□□ -0.44
CTSA-215ENST00000607187 NOP58Q9Y2X3 529 aaKnown RBP12.33□□□□□ -0.44
CTSA-215ENST00000607187 AOX1Q06278 1338 aa12.33□□□□□ -0.44
CTSA-215ENST00000607187 MYH2Q9UKX2 1941 aa12.33□□□□□ -0.44
CTSA-215ENST00000607187 HSPA1AP0DMV8 641 aaKnown RBP12.32□□□□□ -0.44
CTSA-215ENST00000607187 HSPA1BP0DMV9 641 aaKnown RBP12.32□□□□□ -0.44
CTSA-215ENST00000607187 CRKP46108 304 aa12.32□□□□□ -0.44
CTSA-215ENST00000607187 FKBP1BP68106 108 aa12.32□□□□□ -0.44
CTSA-215ENST00000607187 PDE3AQ14432 1141 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms