RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 TNNI2P48788 182 aa19.05■□□□□ 0.64
SSBP4-214ENST00000607020 PRMT2P55345 433 aa19.05■□□□□ 0.64
SSBP4-214ENST00000607020 LMBR1LQ6UX01 489 aa19.05■□□□□ 0.64
SSBP4-214ENST00000607020 CDAN1Q8IWY9 1227 aa19.05■□□□□ 0.64
SSBP4-214ENST00000607020 WWC1Q8IX03 1113 aa19.05■□□□□ 0.64
SSBP4-214ENST00000607020 CSADQ9Y600 493 aa19.05■□□□□ 0.64
SSBP4-214ENST00000607020 LAMB1P07942 1786 aa19.05■□□□□ 0.64
SSBP4-214ENST00000607020 BRCA2P51587 3418 aa19.05■□□□□ 0.64
SSBP4-214ENST00000607020 RBBP6Q7Z6E9 1792 aaKnown RBP19.04■□□□□ 0.64
SSBP4-214ENST00000607020 H0YGN5 161 aa19.04■□□□□ 0.64
SSBP4-214ENST00000607020 CETPP11597 493 aa19.04■□□□□ 0.64
SSBP4-214ENST00000607020 HIBADHP31937 336 aaKnown RBP19.04■□□□□ 0.64
SSBP4-214ENST00000607020 LACTBP83111 547 aaPredicted RBP19.04■□□□□ 0.64
SSBP4-214ENST00000607020 CCDC57Q2TAC2 916 aa19.04■□□□□ 0.64
SSBP4-214ENST00000607020 BEND3Q5T5X7 828 aa19.04■□□□□ 0.64
SSBP4-214ENST00000607020 FAM84BQ96KN1 310 aaPredicted RBP19.04■□□□□ 0.64
SSBP4-214ENST00000607020 CRKP46108 304 aa19.03■□□□□ 0.64
SSBP4-214ENST00000607020 HDLBPQ00341 1268 aaKnown RBP19.03■□□□□ 0.64
SSBP4-214ENST00000607020 KIF22Q14807 665 aa19.03■□□□□ 0.64
SSBP4-214ENST00000607020 ERO1BQ86YB8 467 aa19.03■□□□□ 0.64
SSBP4-214ENST00000607020 MRIQ9BWK5 157 aa19.03■□□□□ 0.64
SSBP4-214ENST00000607020 TMEM39BQ9GZU3 492 aa19.03■□□□□ 0.64
SSBP4-214ENST00000607020 MYH3P11055 1940 aa19.02■□□□□ 0.64
SSBP4-214ENST00000607020 TCP10L2B9ZVM9 353 aa19.02■□□□□ 0.64
SSBP4-214ENST00000607020 EPHA10Q5JZY3 1008 aa19.02■□□□□ 0.64
SSBP4-214ENST00000607020 CNNM1Q9NRU3 951 aa19.02■□□□□ 0.64
SSBP4-214ENST00000607020 CHMP3Q9Y3E7 222 aa19.02■□□□□ 0.64
SSBP4-214ENST00000607020 BTBD19C9JJ37 291 aa19.01■□□□□ 0.63
SSBP4-214ENST00000607020 PLIN1O60240 522 aa19.01■□□□□ 0.63
SSBP4-214ENST00000607020 VAMP4O75379 141 aa19.01■□□□□ 0.63
SSBP4-214ENST00000607020 TAF7LQ5H9L4 462 aa19.01■□□□□ 0.63
SSBP4-214ENST00000607020 ZNF594Q96JF6 807 aaPredicted RBP19.01■□□□□ 0.63
SSBP4-214ENST00000607020 GYG1P46976 350 aa19■□□□□ 0.63
SSBP4-214ENST00000607020 SNAPC2Q13487 334 aa19■□□□□ 0.63
SSBP4-214ENST00000607020 FKBP1CQ5VVH2 108 aa19■□□□□ 0.63
SSBP4-214ENST00000607020 FBXO33Q7Z6M2 555 aa19■□□□□ 0.63
SSBP4-214ENST00000607020 SH3TC2Q8TF17 1288 aa19■□□□□ 0.63
SSBP4-214ENST00000607020 ARHGAP39Q9C0H5 1083 aa19■□□□□ 0.63
SSBP4-214ENST00000607020 SNCAIPQ9Y6H5 919 aa19■□□□□ 0.63
SSBP4-214ENST00000607020 GRM8O00222 908 aa18.99■□□□□ 0.63
SSBP4-214ENST00000607020 C17orf99Q6UX52 265 aa18.99■□□□□ 0.63
SSBP4-214ENST00000607020 FAM83AQ86UY5 434 aa18.99■□□□□ 0.63
SSBP4-214ENST00000607020 HOOK2Q96ED9 719 aa18.99■□□□□ 0.63
SSBP4-214ENST00000607020 SPEF2Q9C093 1822 aa18.98■□□□□ 0.63
SSBP4-214ENST00000607020 IRF6O14896 467 aa18.98■□□□□ 0.63
SSBP4-214ENST00000607020 PPIL2Q13356 520 aa18.98■□□□□ 0.63
SSBP4-214ENST00000607020 NKX2-3Q8TAU0 364 aa18.98■□□□□ 0.63
SSBP4-214ENST00000607020 TBC1D22AQ8WUA7 517 aa18.98■□□□□ 0.63
SSBP4-214ENST00000607020 RIPOR2Q9Y4F9 1068 aa18.98■□□□□ 0.63
SSBP4-214ENST00000607020 CEP290O15078 2479 aa18.97■□□□□ 0.63
SSBP4-214ENST00000607020 TRIOBPQ9H2D6 2365 aa18.97■□□□□ 0.63
SSBP4-214ENST00000607020 F6X3S4 739 aa18.97■□□□□ 0.63
SSBP4-214ENST00000607020 GRIK5Q16478 980 aa18.97■□□□□ 0.63
SSBP4-214ENST00000607020 UBE2Q1Q7Z7E8 422 aa18.97■□□□□ 0.63
SSBP4-214ENST00000607020 ZDHHC15Q96MV8 337 aa18.97■□□□□ 0.63
SSBP4-214ENST00000607020 SRRDQ9UH36 339 aa18.97■□□□□ 0.63
SSBP4-214ENST00000607020 ALDH1L1O75891 902 aa18.96■□□□□ 0.63
SSBP4-214ENST00000607020 MYCP01106 439 aaPredicted RBP18.96■□□□□ 0.63
SSBP4-214ENST00000607020 HOXD10P28358 340 aa18.96■□□□□ 0.63
SSBP4-214ENST00000607020 PPATQ06203 517 aa18.96■□□□□ 0.63
SSBP4-214ENST00000607020 ZKSCAN4Q969J2 545 aaPredicted RBP18.96■□□□□ 0.63
SSBP4-214ENST00000607020 TEKT1Q969V4 418 aa18.96■□□□□ 0.63
SSBP4-214ENST00000607020 SHISA4Q96DD7 197 aa18.96■□□□□ 0.63
SSBP4-214ENST00000607020 WRNIP1Q96S55 665 aa18.96■□□□□ 0.63
SSBP4-214ENST00000607020 SUGT1Q9Y2Z0 365 aa18.96■□□□□ 0.63
SSBP4-214ENST00000607020 MROH5Q6ZUA9 1318 aa18.96■□□□□ 0.63
SSBP4-214ENST00000607020 FANCIQ9NVI1 1328 aa18.96■□□□□ 0.63
SSBP4-214ENST00000607020 APOBEC3HQ6NTF7 200 aaKnown RBP18.95■□□□□ 0.62
SSBP4-214ENST00000607020 CHRDL2Q6WN34 429 aa18.95■□□□□ 0.62
SSBP4-214ENST00000607020 ANKRD23Q86SG2 305 aa18.95■□□□□ 0.62
SSBP4-214ENST00000607020 PUS3Q9BZE2 481 aaKnown RBP18.95■□□□□ 0.62
SSBP4-214ENST00000607020 PRO3102Q9H379 93 aa18.95■□□□□ 0.62
SSBP4-214ENST00000607020 ECM29Q5VYK3 1845 aa18.95■□□□□ 0.62
SSBP4-214ENST00000607020 GJB1P08034 283 aa18.94■□□□□ 0.62
SSBP4-214ENST00000607020 CTGFP29279 349 aa18.94■□□□□ 0.62
SSBP4-214ENST00000607020 PSMC4P43686 418 aa18.94■□□□□ 0.62
SSBP4-214ENST00000607020 GJA8P48165 433 aa18.94■□□□□ 0.62
SSBP4-214ENST00000607020 MTFR1Q15390 333 aa18.94■□□□□ 0.62
SSBP4-214ENST00000607020 DCAF15Q66K64 600 aa18.94■□□□□ 0.62
SSBP4-214ENST00000607020 C9orf78Q9NZ63 289 aaPredicted RBP18.94■□□□□ 0.62
SSBP4-214ENST00000607020 TMOD2Q9NZR1 351 aa18.94■□□□□ 0.62
SSBP4-214ENST00000607020 RBM27Q9P2N5 1060 aaKnown RBP18.94■□□□□ 0.62
SSBP4-214ENST00000607020 KCNH4Q9UQ05 1017 aa18.94■□□□□ 0.62
SSBP4-214ENST00000607020 CACNB3P54284 484 aa18.93■□□□□ 0.62
SSBP4-214ENST00000607020 CAVIN4Q5BKX8 364 aa18.93■□□□□ 0.62
SSBP4-214ENST00000607020 VPS37DQ86XT2 251 aa18.93■□□□□ 0.62
SSBP4-214ENST00000607020 WDR63Q8IWG1 891 aa18.93■□□□□ 0.62
SSBP4-214ENST00000607020 DPF3Q92784 378 aa18.93■□□□□ 0.62
SSBP4-214ENST00000607020 KAZALD1Q96I82 304 aa18.93■□□□□ 0.62
SSBP4-214ENST00000607020 TRIM47Q96LD4 638 aa18.93■□□□□ 0.62
SSBP4-214ENST00000607020 ZNF112Q9UJU3 913 aa18.93■□□□□ 0.62
SSBP4-214ENST00000607020 ADGRA2Q96PE1 1338 aa18.93■□□□□ 0.62
SSBP4-214ENST00000607020 RPAP1Q9BWH6 1393 aaPredicted RBP18.93■□□□□ 0.62
SSBP4-214ENST00000607020 OSBPP22059 807 aa18.92■□□□□ 0.62
SSBP4-214ENST00000607020 GRK4P32298 578 aa18.92■□□□□ 0.62
SSBP4-214ENST00000607020 EXOSC9Q06265 439 aaKnown RBP18.92■□□□□ 0.62
SSBP4-214ENST00000607020 HHIPL2Q6UWX4 724 aa18.92■□□□□ 0.62
SSBP4-214ENST00000607020 HTATIP2Q9BUP3 242 aa18.92■□□□□ 0.62
SSBP4-214ENST00000607020 ZNF341Q9BYN7 854 aa18.92■□□□□ 0.62
SSBP4-214ENST00000607020 CAPN2P17655 700 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms