RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 SCAMP3O14828 347 aaKnown RBP6.55□□□□□ -1.36
RNU6-88P-201ENST00000606801 FSCN2O14926 492 aa6.55□□□□□ -1.36
RNU6-88P-201ENST00000606801 BMP6P22004 513 aa6.55□□□□□ -1.36
RNU6-88P-201ENST00000606801 NACC1Q96RE7 527 aa6.55□□□□□ -1.36
RNU6-88P-201ENST00000606801 CARD10Q9BWT7 1032 aa6.55□□□□□ -1.36
RNU6-88P-201ENST00000606801 ZFYVE1Q9HBF4 777 aa6.55□□□□□ -1.36
RNU6-88P-201ENST00000606801 DDX3YO15523 660 aaKnown RBP6.54□□□□□ -1.36
RNU6-88P-201ENST00000606801 SELPP16109 830 aa6.54□□□□□ -1.36
RNU6-88P-201ENST00000606801 GATA4P43694 442 aa6.54□□□□□ -1.36
RNU6-88P-201ENST00000606801 SV2BQ7L1I2 683 aa6.54□□□□□ -1.36
RNU6-88P-201ENST00000606801 ERMP1Q7Z2K6 904 aa6.54□□□□□ -1.36
RNU6-88P-201ENST00000606801 LENG1Q96BZ8 264 aaPredicted RBP6.54□□□□□ -1.36
RNU6-88P-201ENST00000606801 NOC4LQ9BVI4 516 aaKnown RBP6.54□□□□□ -1.36
RNU6-88P-201ENST00000606801 SOX17Q9H6I2 414 aaPredicted RBP6.54□□□□□ -1.36
RNU6-88P-201ENST00000606801 COPRSQ9NQ92 184 aa6.54□□□□□ -1.36
RNU6-88P-201ENST00000606801 METTL5Q9NRN9 209 aaKnown RBP6.54□□□□□ -1.36
RNU6-88P-201ENST00000606801 TMEM39AQ9NV64 488 aa6.54□□□□□ -1.36
RNU6-88P-201ENST00000606801 C9orf172C9J069 976 aa6.53□□□□□ -1.36
RNU6-88P-201ENST00000606801 ADAM11O75078 769 aa6.53□□□□□ -1.36
RNU6-88P-201ENST00000606801 ECEL1O95672 775 aa6.53□□□□□ -1.36
RNU6-88P-201ENST00000606801 CTSBP07858 339 aa6.53□□□□□ -1.36
RNU6-88P-201ENST00000606801 TCF3P15923 654 aa6.53□□□□□ -1.36
RNU6-88P-201ENST00000606801 ITGAEP38570 1179 aa6.53□□□□□ -1.36
RNU6-88P-201ENST00000606801 CABP4P57796 275 aa6.53□□□□□ -1.36
RNU6-88P-201ENST00000606801 PIP4K2BP78356 416 aa6.53□□□□□ -1.36
RNU6-88P-201ENST00000606801 RAD51AP2Q09MP3 1159 aa6.53□□□□□ -1.36
RNU6-88P-201ENST00000606801 FOXD4L6Q3SYB3 417 aaPredicted RBP6.53□□□□□ -1.36
RNU6-88P-201ENST00000606801 FOXD4L3Q6VB84 417 aaPredicted RBP6.53□□□□□ -1.36
RNU6-88P-201ENST00000606801 FBXO11Q86XK2 927 aa6.53□□□□□ -1.36
RNU6-88P-201ENST00000606801 SLC7A3Q8WY07 619 aa6.53□□□□□ -1.36
RNU6-88P-201ENST00000606801 WNT8BQ93098 351 aa6.53□□□□□ -1.36
RNU6-88P-201ENST00000606801 OSGEPQ9NPF4 335 aa6.53□□□□□ -1.36
RNU6-88P-201ENST00000606801 GPN3Q9UHW5 284 aaPredicted RBP6.53□□□□□ -1.36
RNU6-88P-201ENST00000606801 DLL1O00548 723 aa6.52□□□□□ -1.37
RNU6-88P-201ENST00000606801 ZNF76P36508 570 aa6.52□□□□□ -1.37
RNU6-88P-201ENST00000606801 C19orf57Q0VDD7 668 aa6.52□□□□□ -1.37
RNU6-88P-201ENST00000606801 CCDC85BQ15834 202 aaPredicted RBP6.52□□□□□ -1.37
RNU6-88P-201ENST00000606801 SHISA2Q6UWI4 295 aa6.52□□□□□ -1.37
RNU6-88P-201ENST00000606801 MPRIPQ6WCQ1 1025 aa6.52□□□□□ -1.37
RNU6-88P-201ENST00000606801 PDZD3Q86UT5 571 aa6.52□□□□□ -1.37
RNU6-88P-201ENST00000606801 RNF34Q969K3 372 aa6.52□□□□□ -1.37
RNU6-88P-201ENST00000606801 RSRP1Q9BUV0 290 aa6.52□□□□□ -1.37
RNU6-88P-201ENST00000606801 CEP44Q9C0F1 390 aa6.52□□□□□ -1.37
RNU6-88P-201ENST00000606801 BCL11AQ9H165 835 aa6.52□□□□□ -1.37
RNU6-88P-201ENST00000606801 SRA1Q9HD15 236 aaKnown RBP6.52□□□□□ -1.37
RNU6-88P-201ENST00000606801 F6X3S4 739 aa6.51□□□□□ -1.37
RNU6-88P-201ENST00000606801 DLGAP3O95886 979 aa6.51□□□□□ -1.37
RNU6-88P-201ENST00000606801 RACK1P63244 317 aaKnown RBP6.51□□□□□ -1.37
RNU6-88P-201ENST00000606801 GSTM4Q03013 218 aa6.51□□□□□ -1.37
RNU6-88P-201ENST00000606801 ADGRE1Q14246 886 aa6.51□□□□□ -1.37
RNU6-88P-201ENST00000606801 SUZ12Q15022 739 aaKnown RBP6.51□□□□□ -1.37
RNU6-88P-201ENST00000606801 MAP3K11Q16584 847 aa6.51□□□□□ -1.37
RNU6-88P-201ENST00000606801 GRIN3AQ8TCU5 1115 aa6.51□□□□□ -1.37
RNU6-88P-201ENST00000606801 NME2P22392 152 aa6.5□□□□□ -1.37
RNU6-88P-201ENST00000606801 ARNTP27540 789 aa6.5□□□□□ -1.37
RNU6-88P-201ENST00000606801 NRG1Q02297 640 aaPredicted RBP6.5□□□□□ -1.37
RNU6-88P-201ENST00000606801 ZNF252P-AS1Q0IIN9 211 aa6.5□□□□□ -1.37
RNU6-88P-201ENST00000606801 ZNF394Q53GI3 561 aa6.5□□□□□ -1.37
RNU6-88P-201ENST00000606801 FAM117BQ6P1L5 589 aa6.5□□□□□ -1.37
RNU6-88P-201ENST00000606801 NT5DC4Q86YG4 428 aa6.5□□□□□ -1.37
RNU6-88P-201ENST00000606801 KLHL23Q8NBE8 558 aa6.5□□□□□ -1.37
RNU6-88P-201ENST00000606801 KBTBD4Q9NVX7 518 aa6.5□□□□□ -1.37
RNU6-88P-201ENST00000606801 CACNA2D2Q9NY47 1150 aa6.5□□□□□ -1.37
RNU6-88P-201ENST00000606801 GGT7Q9UJ14 662 aa6.5□□□□□ -1.37
RNU6-88P-201ENST00000606801 TLR6Q9Y2C9 796 aa6.5□□□□□ -1.37
RNU6-88P-201ENST00000606801 FAM177BA6PVY3 158 aa6.49□□□□□ -1.37
RNU6-88P-201ENST00000606801 ADAM23O75077 832 aa6.49□□□□□ -1.37
RNU6-88P-201ENST00000606801 WISP1O95388 367 aa6.49□□□□□ -1.37
RNU6-88P-201ENST00000606801 GARTP22102 1010 aa6.49□□□□□ -1.37
RNU6-88P-201ENST00000606801 CD68P34810 354 aaPredicted RBP6.49□□□□□ -1.37
RNU6-88P-201ENST00000606801 LIG3P49916 1009 aa6.49□□□□□ -1.37
RNU6-88P-201ENST00000606801 DOC2BQ14184 412 aa6.49□□□□□ -1.37
RNU6-88P-201ENST00000606801 MBTPS1Q14703 1052 aa6.49□□□□□ -1.37
RNU6-88P-201ENST00000606801 PCNX4Q63HM2 1172 aa6.49□□□□□ -1.37
RNU6-88P-201ENST00000606801 TTBK2Q6IQ55 1244 aa6.49□□□□□ -1.37
RNU6-88P-201ENST00000606801 IGF2-ASQ6U949 168 aa6.49□□□□□ -1.37
RNU6-88P-201ENST00000606801 AGMOQ6ZNB7 445 aa6.49□□□□□ -1.37
RNU6-88P-201ENST00000606801 MAP4K3Q8IVH8 894 aa6.49□□□□□ -1.37
RNU6-88P-201ENST00000606801 SULF2Q8IWU5 870 aa6.49□□□□□ -1.37
RNU6-88P-201ENST00000606801 PHC3Q8NDX5 983 aa6.49□□□□□ -1.37
RNU6-88P-201ENST00000606801 DDX41Q9UJV9 622 aaKnown RBP6.49□□□□□ -1.37
RNU6-88P-201ENST00000606801 PCDHB5Q9Y5E4 795 aa6.49□□□□□ -1.37
RNU6-88P-201ENST00000606801 PCDHGB7Q9Y5F8 929 aa6.49□□□□□ -1.37
RNU6-88P-201ENST00000606801 LOC100289279A0A1B0GTE1 492 aa6.48□□□□□ -1.37
RNU6-88P-201ENST00000606801 FURINP09958 794 aa6.48□□□□□ -1.37
RNU6-88P-201ENST00000606801 TFE3P19532 575 aaPredicted RBP6.48□□□□□ -1.37
RNU6-88P-201ENST00000606801 MAOBP27338 520 aa6.48□□□□□ -1.37
RNU6-88P-201ENST00000606801 ARL4DP49703 201 aa6.48□□□□□ -1.37
RNU6-88P-201ENST00000606801 NLRP12P59046 1061 aa6.48□□□□□ -1.37
RNU6-88P-201ENST00000606801 PTPN11Q06124 597 aaPredicted RBP6.48□□□□□ -1.37
RNU6-88P-201ENST00000606801 PPP2R3AQ06190 1150 aa6.48□□□□□ -1.37
RNU6-88P-201ENST00000606801 HS2ST1Q7LGA3 356 aa6.48□□□□□ -1.37
RNU6-88P-201ENST00000606801 TXNRD3Q86VQ6 643 aa6.48□□□□□ -1.37
RNU6-88P-201ENST00000606801 UBASH3BQ8TF42 649 aa6.48□□□□□ -1.37
RNU6-88P-201ENST00000606801 RHOVQ96L33 236 aa6.48□□□□□ -1.37
RNU6-88P-201ENST00000606801 TMEM74Q96NL1 305 aa6.48□□□□□ -1.37
RNU6-88P-201ENST00000606801 TPSG1Q9NRR2 321 aa6.48□□□□□ -1.37
RNU6-88P-201ENST00000606801 USP21Q9UK80 565 aa6.48□□□□□ -1.37
RNU6-88P-201ENST00000606801 MINDY4BA8MYZ0 360 aa6.47□□□□□ -1.37
RNU6-88P-201ENST00000606801 GSTP1P09211 210 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms