RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 NFXL1Q6ZNB6 911 aa18.69■□□□□ 0.58
CTSA-214ENST00000606788 NBPF5PQ86XG9 351 aaPredicted RBP18.69■□□□□ 0.58
CTSA-214ENST00000606788 ANKRD18AQ8IVF6 992 aa18.69■□□□□ 0.58
CTSA-214ENST00000606788 CMTR1Q8N1G2 835 aaKnown RBP18.69■□□□□ 0.58
CTSA-214ENST00000606788 PHKBQ93100 1093 aa18.69■□□□□ 0.58
CTSA-214ENST00000606788 NAPBQ9H115 298 aa18.69■□□□□ 0.58
CTSA-214ENST00000606788 EPB41L4AQ9HCS5 686 aaPredicted RBP18.69■□□□□ 0.58
CTSA-214ENST00000606788 NEDD4P46934 1319 aa18.68■□□□□ 0.58
CTSA-214ENST00000606788 MAP3K12Q12852 859 aa18.68■□□□□ 0.58
CTSA-214ENST00000606788 ADGRA1Q86SQ6 560 aa18.68■□□□□ 0.58
CTSA-214ENST00000606788 UQCRFS1P1P0C7P4 283 aa18.68■□□□□ 0.58
CTSA-214ENST00000606788 TDO2P48775 406 aa18.68■□□□□ 0.58
CTSA-214ENST00000606788 MB21D2Q8IYB1 491 aaPredicted RBP18.68■□□□□ 0.58
CTSA-214ENST00000606788 STRBPQ96SI9 672 aaKnown RBP18.68■□□□□ 0.58
CTSA-214ENST00000606788 BCL2L12Q9HB09 334 aa18.68■□□□□ 0.58
CTSA-214ENST00000606788 CYP2D7A0A087X1C5 515 aa18.68■□□□□ 0.58
CTSA-214ENST00000606788 ARID4AP29374 1257 aaPredicted RBP18.68■□□□□ 0.58
CTSA-214ENST00000606788 RESTQ13127 1097 aa18.68■□□□□ 0.58
CTSA-214ENST00000606788 TTF1Q15361 905 aaPredicted RBP18.68■□□□□ 0.58
CTSA-214ENST00000606788 PGBD1Q96JS3 809 aa18.68■□□□□ 0.58
CTSA-214ENST00000606788 GPR101Q96P66 508 aaPredicted RBP18.68■□□□□ 0.58
CTSA-214ENST00000606788 SLC4A4Q9Y6R1 1079 aa18.68■□□□□ 0.58
CTSA-214ENST00000606788 ZPR1O75312 459 aa18.67■□□□□ 0.58
CTSA-214ENST00000606788 FDPSP14324 419 aaKnown RBP18.67■□□□□ 0.58
CTSA-214ENST00000606788 ZSCAN25Q6NSZ9 544 aa18.67■□□□□ 0.58
CTSA-214ENST00000606788 TMEM87AQ8NBN3 555 aa18.67■□□□□ 0.58
CTSA-214ENST00000606788 ABCC12Q96J65 1359 aa18.67■□□□□ 0.58
CTSA-214ENST00000606788 NR1I2O75469 434 aa18.67■□□□□ 0.58
CTSA-214ENST00000606788 PTMAP06454 111 aaKnown RBP18.67■□□□□ 0.58
CTSA-214ENST00000606788 CYP7A1P22680 504 aa18.67■□□□□ 0.58
CTSA-214ENST00000606788 ZNF830Q96NB3 372 aaPredicted RBP18.67■□□□□ 0.58
CTSA-214ENST00000606788 ALDH8A1Q9H2A2 487 aaPredicted RBP18.67■□□□□ 0.58
CTSA-214ENST00000606788 TACC3Q9Y6A5 838 aa18.67■□□□□ 0.58
CTSA-214ENST00000606788 SETDB2Q96T68 719 aa18.66■□□□□ 0.58
CTSA-214ENST00000606788 ORC3Q9UBD5 711 aaPredicted RBP18.66■□□□□ 0.58
CTSA-214ENST00000606788 TCRBV5S4A2TA0A5A2 114 aa18.66■□□□□ 0.58
CTSA-214ENST00000606788 EVX2Q03828 476 aa18.66■□□□□ 0.58
CTSA-214ENST00000606788 IFNL3Q8IZI9 196 aa18.66■□□□□ 0.58
CTSA-214ENST00000606788 USP28Q96RU2 1077 aa18.66■□□□□ 0.58
CTSA-214ENST00000606788 PRDM1O75626 825 aa18.65■□□□□ 0.58
CTSA-214ENST00000606788 DYNLL1P63167 89 aaKnown RBP18.65■□□□□ 0.58
CTSA-214ENST00000606788 SMARCC2Q8TAQ2 1214 aa18.65■□□□□ 0.58
CTSA-214ENST00000606788 CDC5LQ99459 802 aaKnown RBP18.65■□□□□ 0.58
CTSA-214ENST00000606788 HPS5Q9UPZ3 1129 aa18.65■□□□□ 0.58
CTSA-214ENST00000606788 BCL9LQ86UU0 1499 aa18.65■□□□□ 0.58
CTSA-214ENST00000606788 AKAP11Q9UKA4 1901 aa18.64■□□□□ 0.58
CTSA-214ENST00000606788 LAMA4Q16363 1823 aa18.64■□□□□ 0.58
CTSA-214ENST00000606788 UBE3CQ15386 1083 aa18.64■□□□□ 0.57
CTSA-214ENST00000606788 VPS72Q15906 364 aa18.64■□□□□ 0.57
CTSA-214ENST00000606788 CSPP1Q1MSJ5 1256 aa18.64■□□□□ 0.57
CTSA-214ENST00000606788 MYH3P11055 1940 aa18.64■□□□□ 0.57
CTSA-214ENST00000606788 ARHGEF1Q92888 912 aaKnown RBP18.64■□□□□ 0.57
CTSA-214ENST00000606788 MINPP1Q9UNW1 487 aa18.64■□□□□ 0.57
CTSA-214ENST00000606788 NUP62CLQ9H1M0 184 aa18.63■□□□□ 0.57
CTSA-214ENST00000606788 CARMIL3Q8ND23 1372 aa18.63■□□□□ 0.57
CTSA-214ENST00000606788 IFIT3O14879 490 aaKnown RBP18.63■□□□□ 0.57
CTSA-214ENST00000606788 CDC27P30260 824 aa18.63■□□□□ 0.57
CTSA-214ENST00000606788 ME1P48163 572 aa18.63■□□□□ 0.57
CTSA-214ENST00000606788 TMEM67Q5HYA8 995 aa18.63■□□□□ 0.57
CTSA-214ENST00000606788 TXNRD3Q86VQ6 643 aa18.63■□□□□ 0.57
CTSA-214ENST00000606788 C8orf76Q96K31 380 aa18.63■□□□□ 0.57
CTSA-214ENST00000606788 TNMDQ9H2S6 317 aa18.63■□□□□ 0.57
CTSA-214ENST00000606788 ZSWIM5Q9P217 1185 aa18.63■□□□□ 0.57
CTSA-214ENST00000606788 GSG1L2A8MUP6 293 aa18.62■□□□□ 0.57
CTSA-214ENST00000606788 PPP1R9BQ96SB3 815 aa18.62■□□□□ 0.57
CTSA-214ENST00000606788 SCAND2PQ9GZW5 306 aaPredicted RBP18.62■□□□□ 0.57
CTSA-214ENST00000606788 RTCBQ9Y3I0 505 aaKnown RBP18.62■□□□□ 0.57
CTSA-214ENST00000606788 SPEF2Q9C093 1822 aa18.62■□□□□ 0.57
CTSA-214ENST00000606788 FAM196AQ6ZSG2 479 aa18.62■□□□□ 0.57
CTSA-214ENST00000606788 NUP133Q8WUM0 1156 aa18.62■□□□□ 0.57
CTSA-214ENST00000606788 ZNF274Q96GC6 653 aaPredicted RBP18.62■□□□□ 0.57
CTSA-214ENST00000606788 AGXT2Q9BYV1 514 aa18.62■□□□□ 0.57
CTSA-214ENST00000606788 METAP2P50579 478 aaKnown RBP eCLIP18.61■□□□□ 0.57
CTSA-214ENST00000606788 NAP1L5Q96NT1 182 aaPredicted RBP18.61■□□□□ 0.57
CTSA-214ENST00000606788 COL22A1Q8NFW1 1626 aaPredicted RBP18.61■□□□□ 0.57
CTSA-214ENST00000606788 hCG_1642624A0A1W2PR95 340 aa18.61■□□□□ 0.57
CTSA-214ENST00000606788 ILDR1Q86SU0 546 aaPredicted RBP18.61■□□□□ 0.57
CTSA-214ENST00000606788 NLRP3Q96P20 1036 aa18.61■□□□□ 0.57
CTSA-214ENST00000606788 NWD2Q9ULI1 1742 aa18.61■□□□□ 0.57
CTSA-214ENST00000606788 HMGN5P82970 282 aaKnown RBP18.6■□□□□ 0.57
CTSA-214ENST00000606788 SPC24Q8NBT2 197 aa18.6■□□□□ 0.57
CTSA-214ENST00000606788 ANGEL1Q9UNK9 670 aaKnown RBP18.6■□□□□ 0.57
CTSA-214ENST00000606788 PATL2C9JE40 543 aaKnown RBP18.6■□□□□ 0.57
CTSA-214ENST00000606788 RFC4P35249 363 aa18.6■□□□□ 0.57
CTSA-214ENST00000606788 LUZP1Q86V48 1076 aa18.6■□□□□ 0.57
CTSA-214ENST00000606788 PIBF1Q8WXW3 757 aa18.6■□□□□ 0.57
CTSA-214ENST00000606788 ANO8Q9HCE9 1232 aaPredicted RBP18.6■□□□□ 0.57
CTSA-214ENST00000606788 ANKRD36CQ5JPF3 1778 aa18.59■□□□□ 0.57
CTSA-214ENST00000606788 NRAPQ86VF7 1730 aa18.59■□□□□ 0.57
CTSA-214ENST00000606788 KIF28PB7ZC32 967 aa18.59■□□□□ 0.57
CTSA-214ENST00000606788 MSNP26038 577 aaKnown RBP18.59■□□□□ 0.57
CTSA-214ENST00000606788 RPS8P62241 208 aaKnown RBP18.59■□□□□ 0.57
CTSA-214ENST00000606788 FAM84BQ96KN1 310 aaPredicted RBP18.59■□□□□ 0.57
CTSA-214ENST00000606788 MAP3K11Q16584 847 aa18.59■□□□□ 0.57
CTSA-214ENST00000606788 MFSD6Q6ZSS7 791 aa18.59■□□□□ 0.57
CTSA-214ENST00000606788 LLPHQ9BRT6 129 aaKnown RBP18.59■□□□□ 0.57
CTSA-214ENST00000606788 CLIC4Q9Y696 253 aa18.59■□□□□ 0.57
CTSA-214ENST00000606788 ATP2B1P20020 1258 aa18.58■□□□□ 0.57
CTSA-214ENST00000606788 CAVIN4Q5BKX8 364 aa18.58■□□□□ 0.57
CTSA-214ENST00000606788 CCAR1Q8IX12 1150 aaKnown RBP18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms