RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 ABHD8Q96I13 439 aa17.46■□□□□ 0.39
CTSA-211ENST00000606066 MYOZ2Q9NPC6 264 aa17.46■□□□□ 0.39
CTSA-211ENST00000606066 SCN9AQ15858 1988 aa17.46■□□□□ 0.39
CTSA-211ENST00000606066 SALL1Q9NSC2 1324 aa17.46■□□□□ 0.38
CTSA-211ENST00000606066 SHTN1A0MZ66 631 aa17.45■□□□□ 0.38
CTSA-211ENST00000606066 F8W031 263 aaPredicted RBP17.45■□□□□ 0.38
CTSA-211ENST00000606066 FMR1Q06787 632 aaKnown RBP eCLIP17.45■□□□□ 0.38
CTSA-211ENST00000606066 KIF4BQ2VIQ3 1234 aa17.45■□□□□ 0.38
CTSA-211ENST00000606066 TBC1D10BQ4KMP7 808 aaPredicted RBP17.45■□□□□ 0.38
CTSA-211ENST00000606066 RBM26Q5T8P6 1007 aaKnown RBP17.45■□□□□ 0.38
CTSA-211ENST00000606066 SPATA5Q8NB90 893 aa17.45■□□□□ 0.38
CTSA-211ENST00000606066 ZC3H15Q8WU90 426 aaKnown RBP17.45■□□□□ 0.38
CTSA-211ENST00000606066 HHIPL1Q96JK4 782 aa17.45■□□□□ 0.38
CTSA-211ENST00000606066 TLR7Q9NYK1 1049 aaKnown RBP17.45■□□□□ 0.38
CTSA-211ENST00000606066 HMG20BQ9P0W2 317 aa17.45■□□□□ 0.38
CTSA-211ENST00000606066 TTF2Q9UNY4 1162 aaKnown RBP17.45■□□□□ 0.38
CTSA-211ENST00000606066 MAST3O60307 1309 aa17.45■□□□□ 0.38
CTSA-211ENST00000606066 TRAF5O00463 557 aa17.44■□□□□ 0.38
CTSA-211ENST00000606066 SMARCA5O60264 1052 aaPredicted RBP17.44■□□□□ 0.38
CTSA-211ENST00000606066 SPTY2D1Q68D10 685 aaPredicted RBP17.44■□□□□ 0.38
CTSA-211ENST00000606066 TRPM4Q8TD43 1214 aa17.44■□□□□ 0.38
CTSA-211ENST00000606066 BEGAINQ9BUH8 593 aa17.44■□□□□ 0.38
CTSA-211ENST00000606066 LDHBP07195 334 aaKnown RBP17.43■□□□□ 0.38
CTSA-211ENST00000606066 MCAMP43121 646 aa17.43■□□□□ 0.38
CTSA-211ENST00000606066 ANKRD45Q5TZF3 282 aa17.43■□□□□ 0.38
CTSA-211ENST00000606066 CYP4F22Q6NT55 531 aa17.43■□□□□ 0.38
CTSA-211ENST00000606066 SAPCD2Q86UD0 394 aa17.43■□□□□ 0.38
CTSA-211ENST00000606066 GPATCH3Q96I76 525 aa17.43■□□□□ 0.38
CTSA-211ENST00000606066 MRIQ9BWK5 157 aa17.43■□□□□ 0.38
CTSA-211ENST00000606066 SERPINA10Q9UK55 444 aa17.43■□□□□ 0.38
CTSA-211ENST00000606066 ARAP2Q8WZ64 1704 aa17.43■□□□□ 0.38
CTSA-211ENST00000606066 IGHDP01880 384 aa17.42■□□□□ 0.38
CTSA-211ENST00000606066 HIRAP54198 1017 aaPredicted RBP17.42■□□□□ 0.38
CTSA-211ENST00000606066 HDLBPQ00341 1268 aaKnown RBP17.42■□□□□ 0.38
CTSA-211ENST00000606066 DLGAP5Q15398 846 aa17.42■□□□□ 0.38
CTSA-211ENST00000606066 SMC5Q8IY18 1101 aa17.42■□□□□ 0.38
CTSA-211ENST00000606066 MTMR14Q8NCE2 650 aa17.42■□□□□ 0.38
CTSA-211ENST00000606066 ABCF2Q9UG63 623 aa17.42■□□□□ 0.38
CTSA-211ENST00000606066 PSME4Q14997 1843 aa17.42■□□□□ 0.38
CTSA-211ENST00000606066 CA12O43570 354 aa17.41■□□□□ 0.38
CTSA-211ENST00000606066 IGSF3O75054 1194 aa17.41■□□□□ 0.38
CTSA-211ENST00000606066 EGFRP00533 1210 aa17.41■□□□□ 0.38
CTSA-211ENST00000606066 RGS19P49795 217 aa17.41■□□□□ 0.38
CTSA-211ENST00000606066 RBM5P52756 815 aaKnown RBP eCLIP17.41■□□□□ 0.38
CTSA-211ENST00000606066 SCARF1Q14162 830 aa17.41■□□□□ 0.38
CTSA-211ENST00000606066 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.41■□□□□ 0.38
CTSA-211ENST00000606066 COL1A1P02452 1464 aaPredicted RBP17.41■□□□□ 0.38
CTSA-211ENST00000606066 MYO1BO43795 1136 aa17.4■□□□□ 0.38
CTSA-211ENST00000606066 CFAP100Q494V2 611 aa17.4■□□□□ 0.38
CTSA-211ENST00000606066 ERICH6Q7L0X2 663 aa17.4■□□□□ 0.38
CTSA-211ENST00000606066 SLF2Q8IX21 1173 aa17.4■□□□□ 0.38
CTSA-211ENST00000606066 TEKT1Q969V4 418 aa17.4■□□□□ 0.38
CTSA-211ENST00000606066 DCPSQ96C86 337 aaKnown RBP17.4■□□□□ 0.38
CTSA-211ENST00000606066 SNRKQ9NRH2 765 aa17.4■□□□□ 0.38
CTSA-211ENST00000606066 WNT10BO00744 389 aa17.39■□□□□ 0.37
CTSA-211ENST00000606066 CELF2O95319 508 aaKnown RBP17.39■□□□□ 0.37
CTSA-211ENST00000606066 ATP5JP18859 108 aa17.39■□□□□ 0.37
CTSA-211ENST00000606066 PRDX5P30044 214 aa17.39■□□□□ 0.37
CTSA-211ENST00000606066 CRKP46108 304 aa17.39■□□□□ 0.37
CTSA-211ENST00000606066 GRIK5Q16478 980 aa17.39■□□□□ 0.37
CTSA-211ENST00000606066 PI16Q6UXB8 463 aa17.39■□□□□ 0.37
CTSA-211ENST00000606066 PAXIP1Q6ZW49 1069 aaPredicted RBP17.39■□□□□ 0.37
CTSA-211ENST00000606066 CDC37L1Q7L3B6 337 aa17.39■□□□□ 0.37
CTSA-211ENST00000606066 DZIP1Q86YF9 867 aaKnown RBP17.39■□□□□ 0.37
CTSA-211ENST00000606066 ECHDC1Q9NTX5 307 aa17.39■□□□□ 0.37
CTSA-211ENST00000606066 LRP2BPQ9P2M1 347 aa17.39■□□□□ 0.37
CTSA-211ENST00000606066 SPDYE2BA6NHP3 402 aa17.38■□□□□ 0.37
CTSA-211ENST00000606066 SPDYE6P0CI01 402 aa17.38■□□□□ 0.37
CTSA-211ENST00000606066 ZAP70P43403 619 aa17.38■□□□□ 0.37
CTSA-211ENST00000606066 TTF1Q15361 905 aaPredicted RBP17.38■□□□□ 0.37
CTSA-211ENST00000606066 B4GALNT3Q6L9W6 998 aa17.38■□□□□ 0.37
CTSA-211ENST00000606066 HHIPL2Q6UWX4 724 aa17.38■□□□□ 0.37
CTSA-211ENST00000606066 RAI14Q9P0K7 980 aa17.38■□□□□ 0.37
CTSA-211ENST00000606066 CYP2E1P05181 493 aaPredicted RBP17.37■□□□□ 0.37
CTSA-211ENST00000606066 GSTO1P78417 241 aa17.37■□□□□ 0.37
CTSA-211ENST00000606066 NBPF9Q3BBW0 867 aa17.37■□□□□ 0.37
CTSA-211ENST00000606066 ANGEL2Q5VTE6 544 aaKnown RBP17.37■□□□□ 0.37
CTSA-211ENST00000606066 TBC1D9Q6ZT07 1266 aa17.37■□□□□ 0.37
CTSA-211ENST00000606066 ZBED3Q96IU2 234 aaPredicted RBP17.37■□□□□ 0.37
CTSA-211ENST00000606066 ZDHHC15Q96MV8 337 aa17.37■□□□□ 0.37
CTSA-211ENST00000606066 GLIS2Q9BZE0 524 aaPredicted RBP17.37■□□□□ 0.37
CTSA-211ENST00000606066 GGA3Q9NZ52 723 aa17.37■□□□□ 0.37
CTSA-211ENST00000606066 TTC41PQ6P2S7 1318 aa17.37■□□□□ 0.37
CTSA-211ENST00000606066 PITPNM2Q9BZ72 1349 aa17.37■□□□□ 0.37
CTSA-211ENST00000606066 ERC2O15083 957 aa17.36■□□□□ 0.37
CTSA-211ENST00000606066 AOC2O75106 756 aa17.36■□□□□ 0.37
CTSA-211ENST00000606066 LDHCP07864 332 aa17.36■□□□□ 0.37
CTSA-211ENST00000606066 NUCB1Q02818 461 aa17.36■□□□□ 0.37
CTSA-211ENST00000606066 CHD1LQ86WJ1 897 aa17.36■□□□□ 0.37
CTSA-211ENST00000606066 SULF1Q8IWU6 871 aa17.36■□□□□ 0.37
CTSA-211ENST00000606066 PRMT6Q96LA8 375 aaPredicted RBP17.36■□□□□ 0.37
CTSA-211ENST00000606066 BOLA2Q9H3K6 86 aa17.36■□□□□ 0.37
CTSA-211ENST00000606066 ZNF646O15015 1829 aaPredicted RBP17.35■□□□□ 0.37
CTSA-211ENST00000606066 MECOMQ03112 1051 aa17.35■□□□□ 0.37
CTSA-211ENST00000606066 GRM1Q13255 1194 aa17.35■□□□□ 0.37
CTSA-211ENST00000606066 TMED8Q6PL24 325 aaPredicted RBP17.35■□□□□ 0.37
CTSA-211ENST00000606066 KRT26Q7Z3Y9 468 aa17.35■□□□□ 0.37
CTSA-211ENST00000606066 APOBEC3FQ8IUX4 373 aaKnown RBP17.35■□□□□ 0.37
CTSA-211ENST00000606066 DNAJC2Q99543 621 aaKnown RBP17.35■□□□□ 0.37
CTSA-211ENST00000606066 HAUS7Q99871 368 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms