RNA–Protein interactions for RNA: ENST00000605551.2

SRGAP2D-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2D (pseudogene), humanhuman

BASIC

Gene SRGAP2D, Length 1,021 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2D-201ENST00000605551 ARHGEF6Q15052 776 aa11.29□□□□□ -0.6
SRGAP2D-201ENST00000605551 ALDH1L2Q3SY69 923 aa11.29□□□□□ -0.6
SRGAP2D-201ENST00000605551 NBPF12Q5TAG4 269 aaPredicted RBP11.29□□□□□ -0.6
SRGAP2D-201ENST00000605551 IFNL1Q8IU54 200 aa11.29□□□□□ -0.6
SRGAP2D-201ENST00000605551 DZIP1LQ8IYY4 767 aaKnown RBP11.29□□□□□ -0.6
SRGAP2D-201ENST00000605551 PUS3Q9BZE2 481 aaKnown RBP11.29□□□□□ -0.6
SRGAP2D-201ENST00000605551 RIPOR2Q9Y4F9 1068 aa11.29□□□□□ -0.6
SRGAP2D-201ENST00000605551 KIF16BQ96L93 1317 aa11.29□□□□□ -0.6
SRGAP2D-201ENST00000605551 SSC5DA1L4H1 1573 aa11.28□□□□□ -0.6
SRGAP2D-201ENST00000605551 TCP10L2B9ZVM9 353 aa11.28□□□□□ -0.6
SRGAP2D-201ENST00000605551 CT47B1P0C2W7 299 aaPredicted RBP11.28□□□□□ -0.6
SRGAP2D-201ENST00000605551 UBTFL1P0CB47 393 aaPredicted RBP11.28□□□□□ -0.6
SRGAP2D-201ENST00000605551 SSH1Q8WYL5 1049 aa11.28□□□□□ -0.6
SRGAP2D-201ENST00000605551 TDRD3Q9H7E2 651 aaKnown RBP11.28□□□□□ -0.6
SRGAP2D-201ENST00000605551 GNL3LQ9NVN8 582 aaKnown RBP11.28□□□□□ -0.6
SRGAP2D-201ENST00000605551 FZD1Q9UP38 647 aa11.28□□□□□ -0.6
SRGAP2D-201ENST00000605551 IQSEC3Q9UPP2 1182 aaPredicted RBP11.28□□□□□ -0.6
SRGAP2D-201ENST00000605551 SUGT1Q9Y2Z0 365 aa11.28□□□□□ -0.6
SRGAP2D-201ENST00000605551 LAMB1P07942 1786 aa11.27□□□□□ -0.61
SRGAP2D-201ENST00000605551 LRRC24Q50LG9 513 aa11.27□□□□□ -0.61
SRGAP2D-201ENST00000605551 DCAF15Q66K64 600 aa11.27□□□□□ -0.61
SRGAP2D-201ENST00000605551 FBXO33Q7Z6M2 555 aa11.27□□□□□ -0.61
SRGAP2D-201ENST00000605551 ANKRD44Q8N8A2 993 aa11.27□□□□□ -0.61
SRGAP2D-201ENST00000605551 KAZALD1Q96I82 304 aa11.27□□□□□ -0.61
SRGAP2D-201ENST00000605551 CLMNQ96JQ2 1002 aa11.27□□□□□ -0.61
SRGAP2D-201ENST00000605551 API5Q9BZZ5 524 aaKnown RBP11.27□□□□□ -0.61
SRGAP2D-201ENST00000605551 ELP3Q9H9T3 547 aa11.27□□□□□ -0.61
SRGAP2D-201ENST00000605551 TRIM17Q9Y577 477 aa11.27□□□□□ -0.61
SRGAP2D-201ENST00000605551 PCDHAC2Q9Y5I4 1007 aa11.27□□□□□ -0.61
SRGAP2D-201ENST00000605551 EYA2O00167 538 aa11.26□□□□□ -0.61
SRGAP2D-201ENST00000605551 USP2O75604 605 aaPredicted RBP11.26□□□□□ -0.61
SRGAP2D-201ENST00000605551 GTF2A2P52657 109 aa11.26□□□□□ -0.61
SRGAP2D-201ENST00000605551 MAP3K9P80192 1104 aa11.26□□□□□ -0.61
SRGAP2D-201ENST00000605551 SLFN5Q08AF3 891 aa11.26□□□□□ -0.61
SRGAP2D-201ENST00000605551 WDR66Q8TBY9 1149 aa11.26□□□□□ -0.61
SRGAP2D-201ENST00000605551 LPIN2Q92539 896 aa11.26□□□□□ -0.61
SRGAP2D-201ENST00000605551 OPTNQ96CV9 577 aa11.26□□□□□ -0.61
SRGAP2D-201ENST00000605551 FBXO3Q9UK99 471 aa11.26□□□□□ -0.61
SRGAP2D-201ENST00000605551 OTOFQ9HC10 1997 aa11.26□□□□□ -0.61
SRGAP2D-201ENST00000605551 AK9Q5TCS8 1911 aa11.25□□□□□ -0.61
SRGAP2D-201ENST00000605551 IGF2BP3O00425 579 aaKnown RBP eCLIP11.25□□□□□ -0.61
SRGAP2D-201ENST00000605551 TAF1CQ15572 869 aaPredicted RBP11.25□□□□□ -0.61
SRGAP2D-201ENST00000605551 FKBP1CQ5VVH2 108 aa11.25□□□□□ -0.61
SRGAP2D-201ENST00000605551 INTS3Q68E01 1043 aaKnown RBP11.25□□□□□ -0.61
SRGAP2D-201ENST00000605551 FAM83AQ86UY5 434 aa11.25□□□□□ -0.61
SRGAP2D-201ENST00000605551 ZDHHC15Q96MV8 337 aa11.25□□□□□ -0.61
SRGAP2D-201ENST00000605551 MRIQ9BWK5 157 aa11.25□□□□□ -0.61
SRGAP2D-201ENST00000605551 TMEM39BQ9GZU3 492 aa11.25□□□□□ -0.61
SRGAP2D-201ENST00000605551 USP44Q9H0E7 712 aa11.25□□□□□ -0.61
SRGAP2D-201ENST00000605551 ZFYVE28Q9HCC9 887 aa11.25□□□□□ -0.61
SRGAP2D-201ENST00000605551 CEP126Q9P2H0 1117 aa11.25□□□□□ -0.61
SRGAP2D-201ENST00000605551 RPAP1Q9BWH6 1393 aaPredicted RBP11.25□□□□□ -0.61
SRGAP2D-201ENST00000605551 CCL15-CCL14A0A0B4J2E2 113 aa11.24□□□□□ -0.61
SRGAP2D-201ENST00000605551 BCAMP50895 628 aa11.24□□□□□ -0.61
SRGAP2D-201ENST00000605551 SP3Q02447 781 aa11.24□□□□□ -0.61
SRGAP2D-201ENST00000605551 CRHR2Q13324 411 aa11.24□□□□□ -0.61
SRGAP2D-201ENST00000605551 CCL15Q16663 113 aa11.24□□□□□ -0.61
SRGAP2D-201ENST00000605551 ATP2B3Q16720 1220 aa11.24□□□□□ -0.61
SRGAP2D-201ENST00000605551 HHIPL2Q6UWX4 724 aa11.24□□□□□ -0.61
SRGAP2D-201ENST00000605551 ZGPATQ8N5A5 531 aaKnown RBP11.24□□□□□ -0.61
SRGAP2D-201ENST00000605551 VGLL2Q8N8G2 317 aa11.24□□□□□ -0.61
SRGAP2D-201ENST00000605551 KLHDC4Q8TBB5 520 aa11.24□□□□□ -0.61
SRGAP2D-201ENST00000605551 OTUD5Q96G74 571 aa11.24□□□□□ -0.61
SRGAP2D-201ENST00000605551 EFCC1Q9HA90 598 aa11.24□□□□□ -0.61
SRGAP2D-201ENST00000605551 SEMA3EO15041 775 aa11.23□□□□□ -0.61
SRGAP2D-201ENST00000605551 CIAO1O76071 339 aa11.23□□□□□ -0.61
SRGAP2D-201ENST00000605551 CETPP11597 493 aa11.23□□□□□ -0.61
SRGAP2D-201ENST00000605551 VGLL4Q14135 290 aa11.23□□□□□ -0.61
SRGAP2D-201ENST00000605551 KIF22Q14807 665 aa11.23□□□□□ -0.61
SRGAP2D-201ENST00000605551 PRPF38BQ5VTL8 546 aaKnown RBP11.23□□□□□ -0.61
SRGAP2D-201ENST00000605551 OTOP1Q7RTM1 612 aa11.23□□□□□ -0.61
SRGAP2D-201ENST00000605551 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.23□□□□□ -0.61
SRGAP2D-201ENST00000605551 WRNIP1Q96S55 665 aa11.23□□□□□ -0.61
SRGAP2D-201ENST00000605551 ZNF341Q9BYN7 854 aa11.23□□□□□ -0.61
SRGAP2D-201ENST00000605551 TESPA1A2RU30 521 aaPredicted RBP11.22□□□□□ -0.61
SRGAP2D-201ENST00000605551 SPDYE5A6NIY4 337 aa11.22□□□□□ -0.61
SRGAP2D-201ENST00000605551 LDHBP07195 334 aaKnown RBP11.22□□□□□ -0.61
SRGAP2D-201ENST00000605551 FGFR2P21802 821 aa11.22□□□□□ -0.61
SRGAP2D-201ENST00000605551 IL15P40933 162 aaPredicted RBP11.22□□□□□ -0.61
SRGAP2D-201ENST00000605551 CACNB3P54284 484 aa11.22□□□□□ -0.61
SRGAP2D-201ENST00000605551 AOX1Q06278 1338 aa11.22□□□□□ -0.61
SRGAP2D-201ENST00000605551 SNAPC2Q13487 334 aa11.22□□□□□ -0.61
SRGAP2D-201ENST00000605551 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.22□□□□□ -0.61
SRGAP2D-201ENST00000605551 ERO1BQ86YB8 467 aa11.22□□□□□ -0.61
SRGAP2D-201ENST00000605551 SLF2Q8IX21 1173 aa11.22□□□□□ -0.61
SRGAP2D-201ENST00000605551 CD99L2Q8TCZ2 262 aa11.22□□□□□ -0.61
SRGAP2D-201ENST00000605551 TEPSINQ96N21 525 aa11.22□□□□□ -0.61
SRGAP2D-201ENST00000605551 SIL1Q9H173 461 aa11.22□□□□□ -0.61
SRGAP2D-201ENST00000605551 ZCCHC17Q9NP64 241 aaKnown RBP11.22□□□□□ -0.61
SRGAP2D-201ENST00000605551 DENND2AQ9ULE3 1009 aa11.22□□□□□ -0.61
SRGAP2D-201ENST00000605551 SLC34A2O95436 690 aa11.21□□□□□ -0.61
SRGAP2D-201ENST00000605551 GJA5P36382 358 aa11.21□□□□□ -0.61
SRGAP2D-201ENST00000605551 NBPF11Q86T75 865 aa11.21□□□□□ -0.61
SRGAP2D-201ENST00000605551 TMEM106CQ9BVX2 250 aa11.21□□□□□ -0.61
SRGAP2D-201ENST00000605551 R3HDMLQ9H3Y0 253 aa11.21□□□□□ -0.61
SRGAP2D-201ENST00000605551 NOB1Q9ULX3 412 aaKnown RBP11.21□□□□□ -0.61
SRGAP2D-201ENST00000605551 KIAA0100Q14667 2235 aaKnown RBP11.21□□□□□ -0.62
SRGAP2D-201ENST00000605551 IPO8O15397 1037 aaKnown RBP11.2□□□□□ -0.62
SRGAP2D-201ENST00000605551 GNAI3P08754 354 aa11.2□□□□□ -0.62
SRGAP2D-201ENST00000605551 PPIL2Q13356 520 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms