RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 LACTBP83111 547 aaPredicted RBP15.06■□□□□ 0
PDLIM1P1-201ENST00000604187 KIF22Q14807 665 aa15.06■□□□□ 0
PDLIM1P1-201ENST00000604187 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.06■□□□□ 0
PDLIM1P1-201ENST00000604187 TMEM39BQ9GZU3 492 aa15.06■□□□□ 0
PDLIM1P1-201ENST00000604187 TDRD3Q9H7E2 651 aaKnown RBP15.06■□□□□ 0
PDLIM1P1-201ENST00000604187 CSADQ9Y600 493 aa15.06■□□□□ 0
PDLIM1P1-201ENST00000604187 TCP10L2B9ZVM9 353 aa15.05■□□□□ -0
PDLIM1P1-201ENST00000604187 APAF1O14727 1248 aa15.05■□□□□ -0
PDLIM1P1-201ENST00000604187 TLR2O60603 784 aa15.05■□□□□ -0
PDLIM1P1-201ENST00000604187 ECM2O94769 699 aaPredicted RBP15.05■□□□□ -0
PDLIM1P1-201ENST00000604187 CASP7P55210 303 aa15.05■□□□□ -0
PDLIM1P1-201ENST00000604187 G2E3Q7L622 706 aa15.05■□□□□ -0
PDLIM1P1-201ENST00000604187 SLC17A8Q8NDX2 589 aa15.05■□□□□ -0
PDLIM1P1-201ENST00000604187 SPDYE5A6NIY4 337 aa15.04■□□□□ -0
PDLIM1P1-201ENST00000604187 MTFR1Q15390 333 aa15.04■□□□□ -0
PDLIM1P1-201ENST00000604187 MYH16Q9H6N6 1097 aa15.04■□□□□ -0
PDLIM1P1-201ENST00000604187 SERPINA10Q9UK55 444 aa15.04■□□□□ -0
PDLIM1P1-201ENST00000604187 TTF2Q9UNY4 1162 aaKnown RBP15.04■□□□□ -0
PDLIM1P1-201ENST00000604187 BTBD19C9JJ37 291 aa15.03■□□□□ -0
PDLIM1P1-201ENST00000604187 GNRH1P01148 92 aa15.03■□□□□ -0
PDLIM1P1-201ENST00000604187 CETPP11597 493 aa15.03■□□□□ -0
PDLIM1P1-201ENST00000604187 IFIT5Q13325 482 aaKnown RBP15.03■□□□□ -0
PDLIM1P1-201ENST00000604187 MFSD14BQ5SR56 506 aa15.03■□□□□ -0
PDLIM1P1-201ENST00000604187 TSR2Q969E8 191 aaKnown RBP15.03■□□□□ -0
PDLIM1P1-201ENST00000604187 CHMP3Q9Y3E7 222 aa15.03■□□□□ -0
PDLIM1P1-201ENST00000604187 FAM205AQ6ZU69 1335 aa15.02■□□□□ -0
PDLIM1P1-201ENST00000604187 MYCNP04198 464 aaPredicted RBP15.02■□□□□ -0
PDLIM1P1-201ENST00000604187 TNNI2P48788 182 aa15.02■□□□□ -0
PDLIM1P1-201ENST00000604187 PRMT2P55345 433 aa15.02■□□□□ -0
PDLIM1P1-201ENST00000604187 DZIP1LQ8IYY4 767 aaKnown RBP15.02■□□□□ -0
PDLIM1P1-201ENST00000604187 SNCAIPQ9Y6H5 919 aa15.02■□□□□ -0
PDLIM1P1-201ENST00000604187 SPEF2Q9C093 1822 aa15.01□□□□□ -0.01
PDLIM1P1-201ENST00000604187 LAMA3Q16787 3333 aa15.01□□□□□ -0.01
PDLIM1P1-201ENST00000604187 IRF6O14896 467 aa15.01□□□□□ -0.01
PDLIM1P1-201ENST00000604187 PLIN1O60240 522 aa15.01□□□□□ -0.01
PDLIM1P1-201ENST00000604187 SNAPC2Q13487 334 aa15.01□□□□□ -0.01
PDLIM1P1-201ENST00000604187 LINS1Q8NG48 757 aa15.01□□□□□ -0.01
PDLIM1P1-201ENST00000604187 NKX2-3Q8TAU0 364 aa15.01□□□□□ -0.01
PDLIM1P1-201ENST00000604187 HTATIP2Q9BUP3 242 aa15.01□□□□□ -0.01
PDLIM1P1-201ENST00000604187 PRO3102Q9H379 93 aa15.01□□□□□ -0.01
PDLIM1P1-201ENST00000604187 ZCCHC17Q9NP64 241 aaKnown RBP15.01□□□□□ -0.01
PDLIM1P1-201ENST00000604187 LAMB1P07942 1786 aa15.01□□□□□ -0.01
PDLIM1P1-201ENST00000604187 CTGFP29279 349 aa15□□□□□ -0.01
PDLIM1P1-201ENST00000604187 CRKP46108 304 aa15□□□□□ -0.01
PDLIM1P1-201ENST00000604187 CACNB3P54284 484 aa15□□□□□ -0.01
PDLIM1P1-201ENST00000604187 FLIIQ13045 1269 aa15□□□□□ -0.01
PDLIM1P1-201ENST00000604187 UBE2Q1Q7Z7E8 422 aa15□□□□□ -0.01
PDLIM1P1-201ENST00000604187 ERO1BQ86YB8 467 aa15□□□□□ -0.01
PDLIM1P1-201ENST00000604187 RAET1EQ8TD07 263 aa15□□□□□ -0.01
PDLIM1P1-201ENST00000604187 DNAAF4Q8WXU2 420 aa15□□□□□ -0.01
PDLIM1P1-201ENST00000604187 ZKSCAN4Q969J2 545 aaPredicted RBP15□□□□□ -0.01
PDLIM1P1-201ENST00000604187 TRIM47Q96LD4 638 aa15□□□□□ -0.01
PDLIM1P1-201ENST00000604187 WRNIP1Q96S55 665 aa15□□□□□ -0.01
PDLIM1P1-201ENST00000604187 SRRDQ9UH36 339 aa15□□□□□ -0.01
PDLIM1P1-201ENST00000604187 CPA4Q9UI42 421 aa15□□□□□ -0.01
PDLIM1P1-201ENST00000604187 CCL5P13501 91 aa14.99□□□□□ -0.01
PDLIM1P1-201ENST00000604187 OSBPP22059 807 aa14.99□□□□□ -0.01
PDLIM1P1-201ENST00000604187 GRK4P32298 578 aa14.99□□□□□ -0.01
PDLIM1P1-201ENST00000604187 PSMC4P43686 418 aa14.99□□□□□ -0.01
PDLIM1P1-201ENST00000604187 GJA8P48165 433 aa14.99□□□□□ -0.01
PDLIM1P1-201ENST00000604187 FOXO4P98177 505 aa14.99□□□□□ -0.01
PDLIM1P1-201ENST00000604187 FKBP5Q13451 457 aaPredicted RBP14.99□□□□□ -0.01
PDLIM1P1-201ENST00000604187 TWISTNBQ3B726 338 aaPredicted RBP14.99□□□□□ -0.01
PDLIM1P1-201ENST00000604187 TDRD7Q8NHU6 1098 aaKnown RBP14.99□□□□□ -0.01
PDLIM1P1-201ENST00000604187 RIPOR2Q9Y4F9 1068 aa14.99□□□□□ -0.01
PDLIM1P1-201ENST00000604187 NR2E3Q9Y5X4 410 aa14.99□□□□□ -0.01
PDLIM1P1-201ENST00000604187 ZBTB7BO15156 539 aaPredicted RBP14.98□□□□□ -0.01
PDLIM1P1-201ENST00000604187 FMNL1O95466 1100 aaPredicted RBP14.98□□□□□ -0.01
PDLIM1P1-201ENST00000604187 GJB1P08034 283 aa14.98□□□□□ -0.01
PDLIM1P1-201ENST00000604187 GYG1P46976 350 aa14.98□□□□□ -0.01
PDLIM1P1-201ENST00000604187 PPIL2Q13356 520 aa14.98□□□□□ -0.01
PDLIM1P1-201ENST00000604187 TAF7LQ5H9L4 462 aa14.98□□□□□ -0.01
PDLIM1P1-201ENST00000604187 C17orf99Q6UX52 265 aa14.98□□□□□ -0.01
PDLIM1P1-201ENST00000604187 LDHAL6AQ6ZMR3 332 aa14.98□□□□□ -0.01
PDLIM1P1-201ENST00000604187 ZNF594Q96JF6 807 aaPredicted RBP14.98□□□□□ -0.01
PDLIM1P1-201ENST00000604187 RNF208Q9H0X6 261 aa14.98□□□□□ -0.01
PDLIM1P1-201ENST00000604187 CNNM1Q9NRU3 951 aa14.98□□□□□ -0.01
PDLIM1P1-201ENST00000604187 BIN2Q9UBW5 565 aaPredicted RBP14.98□□□□□ -0.01
PDLIM1P1-201ENST00000604187 OTOFQ9HC10 1997 aa14.98□□□□□ -0.01
PDLIM1P1-201ENST00000604187 MYPNQ86TC9 1320 aa14.97□□□□□ -0.01
PDLIM1P1-201ENST00000604187 SOX1O00570 391 aaPredicted RBP14.97□□□□□ -0.01
PDLIM1P1-201ENST00000604187 FARP2O94887 1054 aaPredicted RBP14.97□□□□□ -0.01
PDLIM1P1-201ENST00000604187 HOXD10P28358 340 aa14.97□□□□□ -0.01
PDLIM1P1-201ENST00000604187 HIBADHP31937 336 aaKnown RBP14.97□□□□□ -0.01
PDLIM1P1-201ENST00000604187 CACNB1Q02641 598 aaPredicted RBP14.97□□□□□ -0.01
PDLIM1P1-201ENST00000604187 GRIK5Q16478 980 aa14.97□□□□□ -0.01
PDLIM1P1-201ENST00000604187 CCDC57Q2TAC2 916 aa14.97□□□□□ -0.01
PDLIM1P1-201ENST00000604187 LMBR1LQ6UX01 489 aa14.97□□□□□ -0.01
PDLIM1P1-201ENST00000604187 COL6A3P12111 3177 aa14.97□□□□□ -0.01
PDLIM1P1-201ENST00000604187 PDHXO00330 501 aa14.96□□□□□ -0.01
PDLIM1P1-201ENST00000604187 EPHA10Q5JZY3 1008 aa14.96□□□□□ -0.01
PDLIM1P1-201ENST00000604187 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.96□□□□□ -0.01
PDLIM1P1-201ENST00000604187 PRKCZQ05513 592 aa14.95□□□□□ -0.02
PDLIM1P1-201ENST00000604187 CHAF1AQ13111 956 aaPredicted RBP14.95□□□□□ -0.02
PDLIM1P1-201ENST00000604187 DDX10Q13206 875 aaKnown RBP14.95□□□□□ -0.02
PDLIM1P1-201ENST00000604187 ANKRD23Q86SG2 305 aa14.95□□□□□ -0.02
PDLIM1P1-201ENST00000604187 U2AF1L4Q8WU68 220 aaKnown RBP14.95□□□□□ -0.02
PDLIM1P1-201ENST00000604187 HOOK2Q96ED9 719 aa14.95□□□□□ -0.02
PDLIM1P1-201ENST00000604187 LRCH3Q96II8 777 aa14.95□□□□□ -0.02
PDLIM1P1-201ENST00000604187 FAM84BQ96KN1 310 aaPredicted RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms