RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 TMEM39BQ9GZU3 492 aa21.34■■□□□ 1.01
CCDC12-210ENST00000604181 C9orf78Q9NZ63 289 aaPredicted RBP21.34■■□□□ 1.01
CCDC12-210ENST00000604181 IQSEC3Q9UPP2 1182 aaPredicted RBP21.34■■□□□ 1.01
CCDC12-210ENST00000604181 TCP10L2B9ZVM9 353 aa21.33■■□□□ 1.01
CCDC12-210ENST00000604181 SLC4A10Q6U841 1118 aa21.33■■□□□ 1.01
CCDC12-210ENST00000604181 BRI3BPQ8WY22 251 aa21.33■■□□□ 1.01
CCDC12-210ENST00000604181 SERPINA10Q9UK55 444 aa21.33■■□□□ 1.01
CCDC12-210ENST00000604181 RIPOR2Q9Y4F9 1068 aa21.33■■□□□ 1.01
CCDC12-210ENST00000604181 NBPF7P0C2Y1 421 aaPredicted RBP21.32■■□□□ 1
CCDC12-210ENST00000604181 CRKP46108 304 aa21.32■■□□□ 1
CCDC12-210ENST00000604181 ERO1AQ96HE7 468 aa21.32■■□□□ 1
CCDC12-210ENST00000604181 RBBP6Q7Z6E9 1792 aaKnown RBP21.31■■□□□ 1
CCDC12-210ENST00000604181 ALDH1L1O75891 902 aa21.31■■□□□ 1
CCDC12-210ENST00000604181 VGLL4Q14135 290 aa21.31■■□□□ 1
CCDC12-210ENST00000604181 LRRC24Q50LG9 513 aa21.31■■□□□ 1
CCDC12-210ENST00000604181 EFCC1Q9HA90 598 aa21.31■■□□□ 1
CCDC12-210ENST00000604181 CACNB3P54284 484 aa21.3■■□□□ 1
CCDC12-210ENST00000604181 SP3Q02447 781 aa21.3■■□□□ 1
CCDC12-210ENST00000604181 TNFAIP1Q13829 316 aa21.3■■□□□ 1
CCDC12-210ENST00000604181 FBXO33Q7Z6M2 555 aa21.3■■□□□ 1
CCDC12-210ENST00000604181 ARMC5Q96C12 935 aa21.3■■□□□ 1
CCDC12-210ENST00000604181 SRCIN1Q9C0H9 1055 aa21.3■■□□□ 1
CCDC12-210ENST00000604181 EN2P19622 333 aaPredicted RBP21.29■■□□□ 1
CCDC12-210ENST00000604181 INTS3Q68E01 1043 aaKnown RBP21.29■■□□□ 1
CCDC12-210ENST00000604181 OTUD7BQ6GQQ9 843 aa21.29■■□□□ 1
CCDC12-210ENST00000604181 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.29■■□□□ 1
CCDC12-210ENST00000604181 BICC1Q9H694 974 aaKnown RBP21.29■■□□□ 1
CCDC12-210ENST00000604181 ZSWIM8A7E2V4 1837 aa21.29■■□□□ 1
CCDC12-210ENST00000604181 CEP290O15078 2479 aa21.28■■□□□ 1
CCDC12-210ENST00000604181 CHAF1AQ13111 956 aaPredicted RBP21.28■■□□□ 1
CCDC12-210ENST00000604181 FAM43AQ8N2R8 423 aa21.28■■□□□ 1
CCDC12-210ENST00000604181 ANKRD44Q8N8A2 993 aa21.28■■□□□ 1
CCDC12-210ENST00000604181 UTYO14607 1347 aa21.28■■□□□ 1
CCDC12-210ENST00000604181 CCL15-CCL14A0A0B4J2E2 113 aa21.27■■□□□ 1
CCDC12-210ENST00000604181 MAP3K9P80192 1104 aa21.27■■□□□ 1
CCDC12-210ENST00000604181 CCL15Q16663 113 aa21.27■■□□□ 1
CCDC12-210ENST00000604181 VGLL2Q8N8G2 317 aa21.27■■□□□ 1
CCDC12-210ENST00000604181 TAF1CQ15572 869 aaPredicted RBP21.26■□□□□ 0.99
CCDC12-210ENST00000604181 RABL6Q3YEC7 729 aaPredicted RBP21.26■□□□□ 0.99
CCDC12-210ENST00000604181 KLHDC4Q8TBB5 520 aa21.26■□□□□ 0.99
CCDC12-210ENST00000604181 OTUD5Q96G74 571 aa21.26■□□□□ 0.99
CCDC12-210ENST00000604181 MROH5Q6ZUA9 1318 aa21.26■□□□□ 0.99
CCDC12-210ENST00000604181 PTCH2Q9Y6C5 1203 aa21.25■□□□□ 0.99
CCDC12-210ENST00000604181 SNCAIPQ9Y6H5 919 aa21.25■□□□□ 0.99
CCDC12-210ENST00000604181 BCAMP50895 628 aa21.24■□□□□ 0.99
CCDC12-210ENST00000604181 ZNF333Q96JL9 665 aa21.24■□□□□ 0.99
CCDC12-210ENST00000604181 SPDYE5A6NIY4 337 aa21.23■□□□□ 0.99
CCDC12-210ENST00000604181 GTF2A2P52657 109 aa21.23■□□□□ 0.99
CCDC12-210ENST00000604181 HABP4Q5JVS0 413 aaKnown RBP21.23■□□□□ 0.99
CCDC12-210ENST00000604181 METTL24Q5JXM2 366 aa21.23■□□□□ 0.99
CCDC12-210ENST00000604181 APOBEC3HQ6NTF7 200 aaKnown RBP21.23■□□□□ 0.99
CCDC12-210ENST00000604181 ARHGAP39Q9C0H5 1083 aa21.23■□□□□ 0.99
CCDC12-210ENST00000604181 TNNI2P48788 182 aa21.22■□□□□ 0.99
CCDC12-210ENST00000604181 HDLBPQ00341 1268 aaKnown RBP21.22■□□□□ 0.99
CCDC12-210ENST00000604181 VPS37DQ86XT2 251 aa21.22■□□□□ 0.99
CCDC12-210ENST00000604181 MRPL50Q8N5N7 158 aaKnown RBP21.22■□□□□ 0.99
CCDC12-210ENST00000604181 ZKSCAN4Q969J2 545 aaPredicted RBP21.22■□□□□ 0.99
CCDC12-210ENST00000604181 ZFYVE28Q9HCC9 887 aa21.22■□□□□ 0.99
CCDC12-210ENST00000604181 CSADQ9Y600 493 aa21.22■□□□□ 0.99
CCDC12-210ENST00000604181 PDE8BO95263 885 aa21.21■□□□□ 0.99
CCDC12-210ENST00000604181 FAM9BQ8IZU0 186 aa21.21■□□□□ 0.99
CCDC12-210ENST00000604181 TEKT1Q969V4 418 aa21.21■□□□□ 0.99
CCDC12-210ENST00000604181 ZDHHC15Q96MV8 337 aa21.21■□□□□ 0.99
CCDC12-210ENST00000604181 WRNIP1Q96S55 665 aa21.21■□□□□ 0.99
CCDC12-210ENST00000604181 ZNF521Q96K83 1311 aa21.21■□□□□ 0.99
CCDC12-210ENST00000604181 SZT2Q5T011 3432 aa21.2■□□□□ 0.98
CCDC12-210ENST00000604181 BTBD19C9JJ37 291 aa21.2■□□□□ 0.98
CCDC12-210ENST00000604181 IRF6O14896 467 aa21.2■□□□□ 0.98
CCDC12-210ENST00000604181 FGFR2P21802 821 aa21.2■□□□□ 0.98
CCDC12-210ENST00000604181 TBC1D22AQ8WUA7 517 aa21.2■□□□□ 0.98
CCDC12-210ENST00000604181 RANBP2P49792 3224 aaKnown RBP21.19■□□□□ 0.98
CCDC12-210ENST00000604181 ANP32CO43423 234 aa21.19■□□□□ 0.98
CCDC12-210ENST00000604181 FRAT2O75474 233 aaPredicted RBP21.19■□□□□ 0.98
CCDC12-210ENST00000604181 MYCP01106 439 aaPredicted RBP21.19■□□□□ 0.98
CCDC12-210ENST00000604181 CAVIN4Q5BKX8 364 aa21.19■□□□□ 0.98
CCDC12-210ENST00000604181 GCC1Q96CN9 775 aa21.19■□□□□ 0.98
CCDC12-210ENST00000604181 TRIOBPQ9H2D6 2365 aa21.18■□□□□ 0.98
CCDC12-210ENST00000604181 SLC9C1Q4G0N8 1177 aa21.18■□□□□ 0.98
CCDC12-210ENST00000604181 FAM83AQ86UY5 434 aa21.18■□□□□ 0.98
CCDC12-210ENST00000604181 ERO1BQ86YB8 467 aa21.18■□□□□ 0.98
CCDC12-210ENST00000604181 SH3TC2Q8TF17 1288 aa21.18■□□□□ 0.98
CCDC12-210ENST00000604181 USP44Q9H0E7 712 aa21.18■□□□□ 0.98
CCDC12-210ENST00000604181 TLR2O60603 784 aa21.17■□□□□ 0.98
CCDC12-210ENST00000604181 ECM2O94769 699 aaPredicted RBP21.17■□□□□ 0.98
CCDC12-210ENST00000604181 CTGFP29279 349 aa21.17■□□□□ 0.98
CCDC12-210ENST00000604181 INPP5BP32019 993 aa21.17■□□□□ 0.98
CCDC12-210ENST00000604181 RFX5P48382 616 aaPredicted RBP21.17■□□□□ 0.98
CCDC12-210ENST00000604181 MIGA2Q7L4E1 593 aa21.17■□□□□ 0.98
CCDC12-210ENST00000604181 MRIQ9BWK5 157 aa21.17■□□□□ 0.98
CCDC12-210ENST00000604181 CETPP11597 493 aa21.16■□□□□ 0.98
CCDC12-210ENST00000604181 LACTBP83111 547 aaPredicted RBP21.16■□□□□ 0.98
CCDC12-210ENST00000604181 PPIL2Q13356 520 aa21.16■□□□□ 0.98
CCDC12-210ENST00000604181 FKBP1CQ5VVH2 108 aa21.16■□□□□ 0.98
CCDC12-210ENST00000604181 TMEM106CQ9BVX2 250 aa21.16■□□□□ 0.98
CCDC12-210ENST00000604181 HHIPL2Q6UWX4 724 aa21.15■□□□□ 0.98
CCDC12-210ENST00000604181 SSH1Q8WYL5 1049 aa21.15■□□□□ 0.98
CCDC12-210ENST00000604181 MYH13Q9UKX3 1938 aa21.15■□□□□ 0.98
CCDC12-210ENST00000604181 RPAP1Q9BWH6 1393 aaPredicted RBP21.14■□□□□ 0.98
CCDC12-210ENST00000604181 SNAPC2Q13487 334 aa21.14■□□□□ 0.97
CCDC12-210ENST00000604181 PUM3Q15397 648 aaKnown RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms