RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 hCG_1984214I3L0E3 225 aa5.5□□□□□ -1.53
LINC01109-201ENST00000603837 ABCC5O15440 1437 aa5.5□□□□□ -1.53
LINC01109-201ENST00000603837 HMMRO75330 724 aa5.5□□□□□ -1.53
LINC01109-201ENST00000603837 USP17L8P0C7I0 530 aa5.5□□□□□ -1.53
LINC01109-201ENST00000603837 LAMC1P11047 1609 aa5.5□□□□□ -1.53
LINC01109-201ENST00000603837 XBP1P17861 261 aa5.5□□□□□ -1.53
LINC01109-201ENST00000603837 ATICP31939 592 aa5.5□□□□□ -1.53
LINC01109-201ENST00000603837 AGLP35573 1532 aa5.5□□□□□ -1.53
LINC01109-201ENST00000603837 TROQ12816 1431 aaPredicted RBP5.5□□□□□ -1.53
LINC01109-201ENST00000603837 SEPT2Q15019 361 aa5.5□□□□□ -1.53
LINC01109-201ENST00000603837 FXNQ16595 210 aa5.5□□□□□ -1.53
LINC01109-201ENST00000603837 ZNF394Q53GI3 561 aa5.5□□□□□ -1.53
LINC01109-201ENST00000603837 SRLQ86TD4 932 aa5.5□□□□□ -1.53
LINC01109-201ENST00000603837 USP48Q86UV5 1035 aa5.5□□□□□ -1.53
LINC01109-201ENST00000603837 RELL1Q8IUW5 271 aa5.5□□□□□ -1.53
LINC01109-201ENST00000603837 ADAMTS19Q8TE59 1207 aa5.5□□□□□ -1.53
LINC01109-201ENST00000603837 ATRIPQ8WXE1 791 aa5.5□□□□□ -1.53
LINC01109-201ENST00000603837 ZNF396Q96N95 335 aaPredicted RBP5.5□□□□□ -1.53
LINC01109-201ENST00000603837 ITM2BQ9Y287 266 aa5.5□□□□□ -1.53
LINC01109-201ENST00000603837 RRP15Q9Y3B9 282 aaKnown RBP5.5□□□□□ -1.53
LINC01109-201ENST00000603837 V9GYY5 206 aaPredicted RBP5.5□□□□□ -1.53
LINC01109-201ENST00000603837 ARHGEF12Q9NZN5 1544 aa5.49□□□□□ -1.53
LINC01109-201ENST00000603837 SHANK2Q9UPX8 1470 aa5.49□□□□□ -1.53
LINC01109-201ENST00000603837 UHRF1BP1Q6BDS2 1440 aa5.49□□□□□ -1.53
LINC01109-201ENST00000603837 RBP3P10745 1247 aa5.49□□□□□ -1.53
LINC01109-201ENST00000603837 SERPINB4P48594 390 aa5.49□□□□□ -1.53
LINC01109-201ENST00000603837 GPSM2P81274 684 aa5.49□□□□□ -1.53
LINC01109-201ENST00000603837 WASHC5Q12768 1159 aa5.49□□□□□ -1.53
LINC01109-201ENST00000603837 ESCO1Q5FWF5 840 aa5.49□□□□□ -1.53
LINC01109-201ENST00000603837 LLGL2Q6P1M3 1020 aa5.49□□□□□ -1.53
LINC01109-201ENST00000603837 MORC1Q86VD1 984 aa5.49□□□□□ -1.53
LINC01109-201ENST00000603837 QTRT2Q9H974 415 aaKnown RBP5.49□□□□□ -1.53
LINC01109-201ENST00000603837 KMT5AQ9NQR1 393 aa5.49□□□□□ -1.53
LINC01109-201ENST00000603837 EVA1BQ9NVM1 165 aa5.49□□□□□ -1.53
LINC01109-201ENST00000603837 FAM53CQ9NYF3 392 aa5.49□□□□□ -1.53
LINC01109-201ENST00000603837 FRMPD1Q5SYB0 1578 aa5.49□□□□□ -1.53
LINC01109-201ENST00000603837 CCDC144AA2RUR9 1427 aa5.49□□□□□ -1.53
LINC01109-201ENST00000603837 TMEM88BA6NKF7 163 aa5.49□□□□□ -1.53
LINC01109-201ENST00000603837 CAND2O75155 1236 aa5.49□□□□□ -1.53
LINC01109-201ENST00000603837 RNASEH2AO75792 299 aaKnown RBP5.49□□□□□ -1.53
LINC01109-201ENST00000603837 FOSP01100 380 aaPredicted RBP5.49□□□□□ -1.53
LINC01109-201ENST00000603837 CTHP32929 405 aa5.49□□□□□ -1.53
LINC01109-201ENST00000603837 INHBEP58166 350 aa5.49□□□□□ -1.53
LINC01109-201ENST00000603837 PIP4K2BP78356 416 aa5.49□□□□□ -1.53
LINC01109-201ENST00000603837 ZSCAN26Q16670 478 aa5.49□□□□□ -1.53
LINC01109-201ENST00000603837 INF2Q27J81 1249 aa5.49□□□□□ -1.53
LINC01109-201ENST00000603837 PLA2G2CQ5R387 149 aa5.49□□□□□ -1.53
LINC01109-201ENST00000603837 EFCAB2Q5VUJ9 269 aa5.49□□□□□ -1.53
LINC01109-201ENST00000603837 TTC19Q6DKK2 380 aaPredicted RBP5.49□□□□□ -1.53
LINC01109-201ENST00000603837 SNX32Q86XE0 403 aa5.49□□□□□ -1.53
LINC01109-201ENST00000603837 KIAA1958Q8N8K9 716 aa5.49□□□□□ -1.53
LINC01109-201ENST00000603837 HELQQ8TDG4 1101 aa5.49□□□□□ -1.53
LINC01109-201ENST00000603837 LRRN4Q8WUT4 740 aa5.49□□□□□ -1.53
LINC01109-201ENST00000603837 SNX21Q969T3 373 aa5.49□□□□□ -1.53
LINC01109-201ENST00000603837 EVLQ9UI08 416 aaPredicted RBP5.49□□□□□ -1.53
LINC01109-201ENST00000603837 TMCC3Q9ULS5 477 aa5.49□□□□□ -1.53
LINC01109-201ENST00000603837 LRRFIP2Q9Y608 721 aaKnown RBP5.49□□□□□ -1.53
LINC01109-201ENST00000603837 LRPPRCP42704 1394 aaKnown RBP5.49□□□□□ -1.53
LINC01109-201ENST00000603837 SYNRGQ9UMZ2 1314 aa5.49□□□□□ -1.53
LINC01109-201ENST00000603837 ANKRD33BA6NCL7 494 aa5.49□□□□□ -1.53
LINC01109-201ENST00000603837 ZBTB24O43167 697 aaPredicted RBP5.49□□□□□ -1.53
LINC01109-201ENST00000603837 MAGEA9P43362 315 aa5.49□□□□□ -1.53
LINC01109-201ENST00000603837 PSMC1P62191 440 aaKnown RBP5.49□□□□□ -1.53
LINC01109-201ENST00000603837 RABEP1Q15276 862 aa5.49□□□□□ -1.53
LINC01109-201ENST00000603837 NAP1L4Q99733 375 aaKnown RBP5.49□□□□□ -1.53
LINC01109-201ENST00000603837 IFT122Q9HBG6 1241 aa5.49□□□□□ -1.53
LINC01109-201ENST00000603837 IRAK4Q9NWZ3 460 aa5.49□□□□□ -1.53
LINC01109-201ENST00000603837 ZNF142P52746 1687 aaPredicted RBP5.48□□□□□ -1.53
LINC01109-201ENST00000603837 TNFRSF10BO14763 440 aa5.48□□□□□ -1.53
LINC01109-201ENST00000603837 INMTO95050 263 aa5.48□□□□□ -1.53
LINC01109-201ENST00000603837 NOP9Q86U38 636 aaKnown RBP5.48□□□□□ -1.53
LINC01109-201ENST00000603837 MYO1HQ8N1T3 1032 aa5.48□□□□□ -1.53
LINC01109-201ENST00000603837 KIF1BPQ96EK5 621 aa5.48□□□□□ -1.53
LINC01109-201ENST00000603837 FAM161BQ96MY7 647 aa5.48□□□□□ -1.53
LINC01109-201ENST00000603837 PDGFDQ9GZP0 370 aaPredicted RBP5.48□□□□□ -1.53
LINC01109-201ENST00000603837 LZTS1Q9Y250 596 aa5.48□□□□□ -1.53
LINC01109-201ENST00000603837 PLEKHG2Q9H7P9 1386 aa5.48□□□□□ -1.53
LINC01109-201ENST00000603837 SLC26A4O43511 780 aa5.48□□□□□ -1.53
LINC01109-201ENST00000603837 MTA2O94776 668 aa5.48□□□□□ -1.53
LINC01109-201ENST00000603837 CD151P48509 253 aa5.48□□□□□ -1.53
LINC01109-201ENST00000603837 IRX1P78414 480 aaPredicted RBP5.48□□□□□ -1.53
LINC01109-201ENST00000603837 KCNH2Q12809 1159 aa5.48□□□□□ -1.53
LINC01109-201ENST00000603837 UBE4AQ14139 1066 aa5.48□□□□□ -1.53
LINC01109-201ENST00000603837 JAKMIP3Q5VZ66 844 aa5.48□□□□□ -1.53
LINC01109-201ENST00000603837 LRSAM1Q6UWE0 723 aa5.48□□□□□ -1.53
LINC01109-201ENST00000603837 HDGFL2Q7Z4V5 671 aaPredicted RBP5.48□□□□□ -1.53
LINC01109-201ENST00000603837 TTC12Q9H892 705 aaPredicted RBP5.48□□□□□ -1.53
LINC01109-201ENST00000603837 TRMT1Q9NXH9 659 aaKnown RBP5.48□□□□□ -1.53
LINC01109-201ENST00000603837 MAP10Q9P2G4 905 aa5.48□□□□□ -1.53
LINC01109-201ENST00000603837 FER1L4A9Z1Z3 1794 aa5.48□□□□□ -1.53
LINC01109-201ENST00000603837 ROCK2O75116 1388 aaKnown RBP5.47□□□□□ -1.53
LINC01109-201ENST00000603837 DHX29Q7Z478 1369 aaKnown RBP5.47□□□□□ -1.53
LINC01109-201ENST00000603837 ARHGEF5Q12774 1597 aa5.47□□□□□ -1.53
LINC01109-201ENST00000603837 GPS2Q13227 327 aa5.47□□□□□ -1.53
LINC01109-201ENST00000603837 FAM117BQ6P1L5 589 aa5.47□□□□□ -1.53
LINC01109-201ENST00000603837 MMS22LQ6ZRQ5 1243 aa5.47□□□□□ -1.53
LINC01109-201ENST00000603837 AFAP1Q8N556 730 aa5.47□□□□□ -1.53
LINC01109-201ENST00000603837 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.47□□□□□ -1.53
LINC01109-201ENST00000603837 RNF214Q8ND24 703 aa5.47□□□□□ -1.53
LINC01109-201ENST00000603837 ERCC4Q92889 916 aaPredicted RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms