RNA–Protein interactions for RNA: ENST00000603679.1

VCAM1-205, Transcript of vascular cell adhesion molecule 1, humanhuman

Gene VCAM1, Length 3,865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-205ENST00000603679 BBOX1O75936 387 aa3.74□□□□□ -1.81
VCAM1-205ENST00000603679 C1orf53Q5VUE5 145 aa3.74□□□□□ -1.81
VCAM1-205ENST00000603679 NBPF15Q8N660 670 aa3.74□□□□□ -1.81
VCAM1-205ENST00000603679 PNISRQ8TF01 805 aaKnown RBP3.74□□□□□ -1.81
VCAM1-205ENST00000603679 STXBP5LQ9Y2K9 1186 aa3.74□□□□□ -1.81
VCAM1-205ENST00000603679 PCDHB15Q9Y5E8 787 aa3.74□□□□□ -1.81
VCAM1-205ENST00000603679 PDS5AQ29RF7 1337 aaKnown RBP3.74□□□□□ -1.81
VCAM1-205ENST00000603679 CLSTN1O94985 981 aa3.74□□□□□ -1.81
VCAM1-205ENST00000603679 POU3F3P20264 500 aaPredicted RBP3.74□□□□□ -1.81
VCAM1-205ENST00000603679 TBC1D9BQ66K14 1250 aa3.74□□□□□ -1.81
VCAM1-205ENST00000603679 GIMAP6Q6P9H5 292 aa3.74□□□□□ -1.81
VCAM1-205ENST00000603679 ARHGAP27Q6ZUM4 889 aa3.74□□□□□ -1.81
VCAM1-205ENST00000603679 SLF2Q8IX21 1173 aa3.74□□□□□ -1.81
VCAM1-205ENST00000603679 STK32AQ8WU08 396 aa3.74□□□□□ -1.81
VCAM1-205ENST00000603679 BCCIPQ9P287 314 aaKnown RBP eCLIP3.74□□□□□ -1.81
VCAM1-205ENST00000603679 LAS1LQ9Y4W2 734 aaKnown RBP3.74□□□□□ -1.81
VCAM1-205ENST00000603679 ATRNL1Q5VV63 1379 aa3.74□□□□□ -1.81
VCAM1-205ENST00000603679 ATP5J2-PTCD1G3V325 749 aa3.73□□□□□ -1.81
VCAM1-205ENST00000603679 NDUFV2P19404 249 aa3.73□□□□□ -1.81
VCAM1-205ENST00000603679 SALL2Q9Y467 1007 aaPredicted RBP3.73□□□□□ -1.81
VCAM1-205ENST00000603679 MAP3K15Q6ZN16 1313 aa3.73□□□□□ -1.81
VCAM1-205ENST00000603679 USP17L15C9J2P7 530 aa3.73□□□□□ -1.81
VCAM1-205ENST00000603679 USP17L10C9JJH3 530 aa3.73□□□□□ -1.81
VCAM1-205ENST00000603679 USP17L13C9JLJ4 530 aa3.73□□□□□ -1.81
VCAM1-205ENST00000603679 USP17L12C9JPN9 530 aa3.73□□□□□ -1.81
VCAM1-205ENST00000603679 USP17L11C9JVI0 530 aa3.73□□□□□ -1.81
VCAM1-205ENST00000603679 USP17L21D6R901 530 aa3.73□□□□□ -1.81
VCAM1-205ENST00000603679 USP17L18D6R9N7 530 aa3.73□□□□□ -1.81
VCAM1-205ENST00000603679 USP17L22D6RA61 530 aa3.73□□□□□ -1.81
VCAM1-205ENST00000603679 USP17L17D6RBQ6 530 aa3.73□□□□□ -1.81
VCAM1-205ENST00000603679 USP17L19D6RCP7 530 aa3.73□□□□□ -1.81
VCAM1-205ENST00000603679 USP17L20D6RJB6 530 aa3.73□□□□□ -1.81
VCAM1-205ENST00000603679 MARCH6O60337 910 aa3.73□□□□□ -1.81
VCAM1-205ENST00000603679 ATP2B4P23634 1241 aa3.73□□□□□ -1.81
VCAM1-205ENST00000603679 CLCN6P51797 869 aa3.73□□□□□ -1.81
VCAM1-205ENST00000603679 USP17L24Q0WX57 530 aa3.73□□□□□ -1.81
VCAM1-205ENST00000603679 NR1H3Q13133 447 aa3.73□□□□□ -1.81
VCAM1-205ENST00000603679 CSPP1Q1MSJ5 1256 aa3.73□□□□□ -1.81
VCAM1-205ENST00000603679 FKBP1CQ5VVH2 108 aa3.73□□□□□ -1.81
VCAM1-205ENST00000603679 PIK3R5Q8WYR1 880 aa3.73□□□□□ -1.81
VCAM1-205ENST00000603679 CARD11Q9BXL7 1154 aa3.73□□□□□ -1.81
VCAM1-205ENST00000603679 TMX1Q9H3N1 280 aa3.73□□□□□ -1.81
VCAM1-205ENST00000603679 METTL5Q9NRN9 209 aaKnown RBP3.73□□□□□ -1.81
VCAM1-205ENST00000603679 ZNRF3Q9ULT6 936 aa3.73□□□□□ -1.81
VCAM1-205ENST00000603679 ST5P78524 1137 aa3.73□□□□□ -1.81
VCAM1-205ENST00000603679 NOL9Q5SY16 702 aaKnown RBP3.73□□□□□ -1.81
VCAM1-205ENST00000603679 RGMBQ6NW40 437 aa3.73□□□□□ -1.81
VCAM1-205ENST00000603679 TMED8Q6PL24 325 aaPredicted RBP3.73□□□□□ -1.81
VCAM1-205ENST00000603679 ANP32EQ9BTT0 268 aa3.73□□□□□ -1.81
VCAM1-205ENST00000603679 DCTN4Q9UJW0 460 aa3.73□□□□□ -1.81
VCAM1-205ENST00000603679 PCDHGA10Q9Y5H3 936 aa3.73□□□□□ -1.81
VCAM1-205ENST00000603679 PRSS12P56730 875 aa3.72□□□□□ -1.81
VCAM1-205ENST00000603679 CTDSPL2Q05D32 466 aa3.72□□□□□ -1.81
VCAM1-205ENST00000603679 NUTM2GQ5VZR2 741 aa3.72□□□□□ -1.81
VCAM1-205ENST00000603679 USPL1Q5W0Q7 1092 aa3.72□□□□□ -1.81
VCAM1-205ENST00000603679 ZNF790Q6PG37 636 aa3.72□□□□□ -1.81
VCAM1-205ENST00000603679 CDC37L1Q7L3B6 337 aa3.72□□□□□ -1.81
VCAM1-205ENST00000603679 CHMP4BQ9H444 224 aaKnown RBP3.72□□□□□ -1.81
VCAM1-205ENST00000603679 TTLL13PA6NNM8 815 aa3.72□□□□□ -1.81
VCAM1-205ENST00000603679 HIRAP54198 1017 aaPredicted RBP3.72□□□□□ -1.81
VCAM1-205ENST00000603679 MRPL58Q14197 206 aaKnown RBP3.72□□□□□ -1.81
VCAM1-205ENST00000603679 EAPPQ56P03 285 aaPredicted RBP3.72□□□□□ -1.81
VCAM1-205ENST00000603679 FAM43BQ6ZT52 329 aaPredicted RBP3.72□□□□□ -1.81
VCAM1-205ENST00000603679 ZNF652Q9Y2D9 606 aa3.72□□□□□ -1.81
VCAM1-205ENST00000603679 USP17L3A6NCW0 530 aa3.72□□□□□ -1.81
VCAM1-205ENST00000603679 USP17L4A6NCW7 530 aa3.72□□□□□ -1.81
VCAM1-205ENST00000603679 STARD3NLO95772 234 aa3.72□□□□□ -1.81
VCAM1-205ENST00000603679 PPP2R1AP30153 589 aa3.72□□□□□ -1.81
VCAM1-205ENST00000603679 AMPHP49418 695 aa3.72□□□□□ -1.81
VCAM1-205ENST00000603679 TNIP1Q15025 636 aa3.72□□□□□ -1.81
VCAM1-205ENST00000603679 FOXD4L6Q3SYB3 417 aaPredicted RBP3.72□□□□□ -1.81
VCAM1-205ENST00000603679 USP17L2Q6R6M4 530 aa3.72□□□□□ -1.81
VCAM1-205ENST00000603679 FOXD4L3Q6VB84 417 aaPredicted RBP3.72□□□□□ -1.81
VCAM1-205ENST00000603679 TAS1R3Q7RTX0 852 aa3.72□□□□□ -1.81
VCAM1-205ENST00000603679 USP17L1Q7RTZ2 530 aa3.72□□□□□ -1.81
VCAM1-205ENST00000603679 PDCD7Q8N8D1 485 aaKnown RBP3.72□□□□□ -1.81
VCAM1-205ENST00000603679 GAS2L2Q8NHY3 880 aa3.72□□□□□ -1.81
VCAM1-205ENST00000603679 ISCA1Q9BUE6 129 aa3.72□□□□□ -1.81
VCAM1-205ENST00000603679 TRIM35Q9UPQ4 493 aa3.72□□□□□ -1.81
VCAM1-205ENST00000603679 MYH8P13535 1937 aa3.72□□□□□ -1.81
VCAM1-205ENST00000603679 RCCD1A6NED2 376 aa3.71□□□□□ -1.81
VCAM1-205ENST00000603679 ICMTO60725 284 aa3.71□□□□□ -1.81
VCAM1-205ENST00000603679 MAP4K4O95819 1239 aaPredicted RBP3.71□□□□□ -1.81
VCAM1-205ENST00000603679 HDLBPQ00341 1268 aaKnown RBP3.71□□□□□ -1.81
VCAM1-205ENST00000603679 PTK7Q13308 1070 aa3.71□□□□□ -1.81
VCAM1-205ENST00000603679 SYNE4Q8N205 404 aa3.71□□□□□ -1.81
VCAM1-205ENST00000603679 TGIF2Q9GZN2 237 aa3.71□□□□□ -1.81
VCAM1-205ENST00000603679 HMX1Q9NP08 348 aaPredicted RBP3.71□□□□□ -1.81
VCAM1-205ENST00000603679 BCS1LQ9Y276 419 aa3.71□□□□□ -1.81
VCAM1-205ENST00000603679 PTPN22Q9Y2R2 807 aa3.71□□□□□ -1.81
VCAM1-205ENST00000603679 MTMR2Q13614 643 aa3.71□□□□□ -1.82
VCAM1-205ENST00000603679 ANKMY2Q8IV38 441 aa3.71□□□□□ -1.82
VCAM1-205ENST00000603679 MAGEC2Q9UBF1 373 aaPredicted RBP3.71□□□□□ -1.82
VCAM1-205ENST00000603679 ZNF112Q9UJU3 913 aa3.71□□□□□ -1.82
VCAM1-205ENST00000603679 ZBTB1Q9Y2K1 713 aa3.71□□□□□ -1.82
VCAM1-205ENST00000603679 UBN2Q6ZU65 1347 aa3.71□□□□□ -1.82
VCAM1-205ENST00000603679 ATP2B1P20020 1258 aa3.71□□□□□ -1.82
VCAM1-205ENST00000603679 DNAJB2P25686 324 aa3.71□□□□□ -1.82
VCAM1-205ENST00000603679 CHRNA5P30532 468 aa3.71□□□□□ -1.82
VCAM1-205ENST00000603679 RBL2Q08999 1139 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms