RNA–Protein interactions for RNA: ENST00000602888.5

UBE2E3-212, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 2

Gene UBE2E3, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-212ENST00000602888 AP3B2Q13367 1082 aa8.16□□□□□ -1.1
UBE2E3-212ENST00000602888 MEI1Q5TIA1 1274 aa8.16□□□□□ -1.1
UBE2E3-212ENST00000602888 USP26Q9BXU7 913 aa8.16□□□□□ -1.1
UBE2E3-212ENST00000602888 USP21Q9UK80 565 aa8.16□□□□□ -1.1
UBE2E3-212ENST00000602888 GDF11O95390 407 aa8.15□□□□□ -1.1
UBE2E3-212ENST00000602888 CYP11A1P05108 521 aa8.15□□□□□ -1.1
UBE2E3-212ENST00000602888 ST13P50502 369 aaKnown RBP8.15□□□□□ -1.1
UBE2E3-212ENST00000602888 NRG1Q02297 640 aaPredicted RBP8.15□□□□□ -1.1
UBE2E3-212ENST00000602888 TAF1CQ15572 869 aaPredicted RBP8.15□□□□□ -1.1
UBE2E3-212ENST00000602888 DUOXA2Q1HG44 320 aa8.15□□□□□ -1.1
UBE2E3-212ENST00000602888 TMEM151AQ8N4L1 468 aa8.15□□□□□ -1.1
UBE2E3-212ENST00000602888 UBASH3BQ8TF42 649 aa8.15□□□□□ -1.1
UBE2E3-212ENST00000602888 NECAB3Q96P71 396 aaPredicted RBP8.15□□□□□ -1.1
UBE2E3-212ENST00000602888 TRIM56Q9BRZ2 755 aaKnown RBP8.15□□□□□ -1.1
UBE2E3-212ENST00000602888 NRSN2Q9GZP1 204 aa8.15□□□□□ -1.1
UBE2E3-212ENST00000602888 UNCXA6NJT0 531 aa8.14□□□□□ -1.11
UBE2E3-212ENST00000602888 ENC1O14682 589 aa8.14□□□□□ -1.11
UBE2E3-212ENST00000602888 WISP1O95388 367 aa8.14□□□□□ -1.11
UBE2E3-212ENST00000602888 CCDC85BQ15834 202 aaPredicted RBP8.14□□□□□ -1.11
UBE2E3-212ENST00000602888 ACAD11Q709F0 780 aa8.14□□□□□ -1.11
UBE2E3-212ENST00000602888 SV2BQ7L1I2 683 aa8.14□□□□□ -1.11
UBE2E3-212ENST00000602888 MRRFQ96E11 262 aaKnown RBP8.14□□□□□ -1.11
UBE2E3-212ENST00000602888 USP31Q70CQ4 1352 aa8.13□□□□□ -1.11
UBE2E3-212ENST00000602888 LOC100289279A0A1B0GTE1 492 aa8.13□□□□□ -1.11
UBE2E3-212ENST00000602888 VAMP1P23763 118 aa8.13□□□□□ -1.11
UBE2E3-212ENST00000602888 POU4F3Q15319 338 aa8.13□□□□□ -1.11
UBE2E3-212ENST00000602888 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.13□□□□□ -1.11
UBE2E3-212ENST00000602888 ZNF428Q96B54 188 aa8.13□□□□□ -1.11
UBE2E3-212ENST00000602888 CORO1BQ9BR76 489 aa8.13□□□□□ -1.11
UBE2E3-212ENST00000602888 CELA3AP09093 270 aa8.12□□□□□ -1.11
UBE2E3-212ENST00000602888 NME2P22392 152 aa8.12□□□□□ -1.11
UBE2E3-212ENST00000602888 MAOBP27338 520 aa8.12□□□□□ -1.11
UBE2E3-212ENST00000602888 CHRNA4P43681 627 aa8.12□□□□□ -1.11
UBE2E3-212ENST00000602888 ADGRE1Q14246 886 aa8.12□□□□□ -1.11
UBE2E3-212ENST00000602888 MBTPS1Q14703 1052 aa8.12□□□□□ -1.11
UBE2E3-212ENST00000602888 CD163Q86VB7 1156 aa8.12□□□□□ -1.11
UBE2E3-212ENST00000602888 SULF2Q8IWU5 870 aa8.12□□□□□ -1.11
UBE2E3-212ENST00000602888 TMEM130Q8N3G9 435 aa8.12□□□□□ -1.11
UBE2E3-212ENST00000602888 SAMM50Q9Y512 469 aa8.12□□□□□ -1.11
UBE2E3-212ENST00000602888 C1QTNF9BB2RNN3 333 aa8.11□□□□□ -1.11
UBE2E3-212ENST00000602888 F8W735 103 aaPredicted RBP8.11□□□□□ -1.11
UBE2E3-212ENST00000602888 PAGE1O75459 146 aa8.11□□□□□ -1.11
UBE2E3-212ENST00000602888 RBM25P49756 843 aaKnown RBP8.11□□□□□ -1.11
UBE2E3-212ENST00000602888 TSNAXIP1Q2TAA8 658 aa8.11□□□□□ -1.11
UBE2E3-212ENST00000602888 HP1BP3Q5SSJ5 553 aaPredicted RBP8.11□□□□□ -1.11
UBE2E3-212ENST00000602888 KIAA1211Q6ZU35 1233 aa8.11□□□□□ -1.11
UBE2E3-212ENST00000602888 NOC4LQ9BVI4 516 aaKnown RBP8.11□□□□□ -1.11
UBE2E3-212ENST00000602888 RUSC1Q9BVN2 902 aa8.11□□□□□ -1.11
UBE2E3-212ENST00000602888 AKTIPQ9H8T0 292 aa8.11□□□□□ -1.11
UBE2E3-212ENST00000602888 KIAA1522Q9P206 1035 aaPredicted RBP8.11□□□□□ -1.11
UBE2E3-212ENST00000602888 RECKO95980 971 aa8.1□□□□□ -1.11
UBE2E3-212ENST00000602888 GSTP1P09211 210 aaKnown RBP8.1□□□□□ -1.11
UBE2E3-212ENST00000602888 ARNTP27540 789 aa8.1□□□□□ -1.11
UBE2E3-212ENST00000602888 TMEM87AQ8NBN3 555 aa8.1□□□□□ -1.11
UBE2E3-212ENST00000602888 EMILIN2Q9BXX0 1053 aa8.1□□□□□ -1.11
UBE2E3-212ENST00000602888 BACH2Q9BYV9 841 aa8.1□□□□□ -1.11
UBE2E3-212ENST00000602888 RNF208Q9H0X6 261 aa8.1□□□□□ -1.11
UBE2E3-212ENST00000602888 ECEL1O95672 775 aa8.09□□□□□ -1.11
UBE2E3-212ENST00000602888 DLGAP3O95886 979 aa8.09□□□□□ -1.11
UBE2E3-212ENST00000602888 CTSBP07858 339 aa8.09□□□□□ -1.11
UBE2E3-212ENST00000602888 IREB2P48200 963 aaKnown RBP8.09□□□□□ -1.11
UBE2E3-212ENST00000602888 PDE3AQ14432 1141 aa8.09□□□□□ -1.11
UBE2E3-212ENST00000602888 PLA2G4EQ3MJ16 856 aa8.09□□□□□ -1.11
UBE2E3-212ENST00000602888 PCNX4Q63HM2 1172 aa8.09□□□□□ -1.11
UBE2E3-212ENST00000602888 TXNRD3Q86VQ6 643 aa8.09□□□□□ -1.11
UBE2E3-212ENST00000602888 AGGF1Q8N302 714 aaeCLIP8.09□□□□□ -1.11
UBE2E3-212ENST00000602888 STK35Q8TDR2 534 aa8.09□□□□□ -1.11
UBE2E3-212ENST00000602888 WFDC12Q8WWY7 111 aa8.09□□□□□ -1.11
UBE2E3-212ENST00000602888 CBX8Q9HC52 389 aa8.09□□□□□ -1.11
UBE2E3-212ENST00000602888 MEGF11A6BM72 1044 aa8.08□□□□□ -1.12
UBE2E3-212ENST00000602888 ALX3O95076 343 aa8.08□□□□□ -1.12
UBE2E3-212ENST00000602888 NOS3P29474 1203 aa8.08□□□□□ -1.12
UBE2E3-212ENST00000602888 HNRNPUQ00839 825 aaKnown RBP eCLIP8.08□□□□□ -1.12
UBE2E3-212ENST00000602888 LDLRAD1Q5T700 205 aa8.08□□□□□ -1.12
UBE2E3-212ENST00000602888 TTBK2Q6IQ55 1244 aa8.08□□□□□ -1.12
UBE2E3-212ENST00000602888 PDZD3Q86UT5 571 aa8.08□□□□□ -1.12
UBE2E3-212ENST00000602888 TMPRSS13Q9BYE2 586 aa8.08□□□□□ -1.12
UBE2E3-212ENST00000602888 RLBP1P12271 317 aa8.07□□□□□ -1.12
UBE2E3-212ENST00000602888 GLB1P16278 677 aa8.07□□□□□ -1.12
UBE2E3-212ENST00000602888 BMP6P22004 513 aa8.07□□□□□ -1.12
UBE2E3-212ENST00000602888 LRRC14Q15048 493 aa8.07□□□□□ -1.12
UBE2E3-212ENST00000602888 MAP3K11Q16584 847 aa8.07□□□□□ -1.12
UBE2E3-212ENST00000602888 EXOSC6Q5RKV6 272 aaKnown RBP8.07□□□□□ -1.12
UBE2E3-212ENST00000602888 NUTM2GQ5VZR2 741 aa8.07□□□□□ -1.12
UBE2E3-212ENST00000602888 LLGL2Q6P1M3 1020 aa8.07□□□□□ -1.12
UBE2E3-212ENST00000602888 Q6ZS46 218 aa8.07□□□□□ -1.12
UBE2E3-212ENST00000602888 KCNB2Q92953 911 aa8.07□□□□□ -1.12
UBE2E3-212ENST00000602888 ZC3H12CQ9C0D7 883 aaKnown RBP8.07□□□□□ -1.12
UBE2E3-212ENST00000602888 CCDC86Q9H6F5 360 aaKnown RBP8.07□□□□□ -1.12
UBE2E3-212ENST00000602888 KRT82Q9NSB4 513 aa8.07□□□□□ -1.12
UBE2E3-212ENST00000602888 ITGB2P05107 769 aa8.06□□□□□ -1.12
UBE2E3-212ENST00000602888 GATA4P43694 442 aa8.06□□□□□ -1.12
UBE2E3-212ENST00000602888 LIG3P49916 1009 aa8.06□□□□□ -1.12
UBE2E3-212ENST00000602888 ZNF252P-AS1Q0IIN9 211 aa8.06□□□□□ -1.12
UBE2E3-212ENST00000602888 MAP1SQ66K74 1059 aaPredicted RBP8.06□□□□□ -1.12
UBE2E3-212ENST00000602888 ANKRD34AQ69YU3 496 aa8.06□□□□□ -1.12
UBE2E3-212ENST00000602888 FDX2Q6P4F2 183 aa8.06□□□□□ -1.12
UBE2E3-212ENST00000602888 CEP41Q9BYV8 373 aa8.06□□□□□ -1.12
UBE2E3-212ENST00000602888 CYP4F12Q9HCS2 524 aa8.06□□□□□ -1.12
UBE2E3-212ENST00000602888 CYP8B1Q9UNU6 501 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms