RNA–Protein interactions for RNA: ENST00000602565.2

SGMS1-206, Transcript of sphingomyelin synthase 1, humanhuman

Gene SGMS1, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-206ENST00000602565 A0A0A0MRY4 1105 aa11.94□□□□□ -0.5
SGMS1-206ENST00000602565 LMNB1P20700 586 aa11.94□□□□□ -0.5
SGMS1-206ENST00000602565 TRIM28Q13263 835 aaKnown RBP11.94□□□□□ -0.5
SGMS1-206ENST00000602565 AP3B2Q13367 1082 aa11.94□□□□□ -0.5
SGMS1-206ENST00000602565 PWP1Q13610 501 aa11.94□□□□□ -0.5
SGMS1-206ENST00000602565 HGSNATQ68CP4 663 aa11.94□□□□□ -0.5
SGMS1-206ENST00000602565 NT5DC4Q86YG4 428 aa11.94□□□□□ -0.5
SGMS1-206ENST00000602565 RELL1Q8IUW5 271 aa11.94□□□□□ -0.5
SGMS1-206ENST00000602565 CYP11A1P05108 521 aa11.93□□□□□ -0.5
SGMS1-206ENST00000602565 ERCC5P28715 1186 aaPredicted RBP11.93□□□□□ -0.5
SGMS1-206ENST00000602565 SUZ12Q15022 739 aaKnown RBP11.93□□□□□ -0.5
SGMS1-206ENST00000602565 PRRT3Q5FWE3 981 aa11.93□□□□□ -0.5
SGMS1-206ENST00000602565 TTBK2Q6IQ55 1244 aa11.93□□□□□ -0.5
SGMS1-206ENST00000602565 SULF2Q8IWU5 870 aa11.93□□□□□ -0.5
SGMS1-206ENST00000602565 TRIM56Q9BRZ2 755 aaKnown RBP11.93□□□□□ -0.5
SGMS1-206ENST00000602565 PAGE1O75459 146 aa11.92□□□□□ -0.5
SGMS1-206ENST00000602565 NME2P22392 152 aa11.92□□□□□ -0.5
SGMS1-206ENST00000602565 PCNX4Q63HM2 1172 aa11.92□□□□□ -0.5
SGMS1-206ENST00000602565 USP48Q86UV5 1035 aa11.92□□□□□ -0.5
SGMS1-206ENST00000602565 FMR1NBQ8N0W7 255 aaPredicted RBP11.92□□□□□ -0.5
SGMS1-206ENST00000602565 KLHDC7BQ96G42 594 aa11.92□□□□□ -0.5
SGMS1-206ENST00000602565 SCARF2Q96GP6 870 aaPredicted RBP11.92□□□□□ -0.5
SGMS1-206ENST00000602565 EMILIN2Q9BXX0 1053 aa11.92□□□□□ -0.5
SGMS1-206ENST00000602565 CBX8Q9HC52 389 aa11.92□□□□□ -0.5
SGMS1-206ENST00000602565 CNTNAP5Q8WYK1 1306 aa11.92□□□□□ -0.5
SGMS1-206ENST00000602565 FAM181BA6NEQ2 426 aa11.91□□□□□ -0.5
SGMS1-206ENST00000602565 CD68P34810 354 aaPredicted RBP11.91□□□□□ -0.5
SGMS1-206ENST00000602565 LIG3P49916 1009 aa11.91□□□□□ -0.5
SGMS1-206ENST00000602565 NLRP12P59046 1061 aa11.91□□□□□ -0.5
SGMS1-206ENST00000602565 GALNT11Q8NCW6 608 aa11.91□□□□□ -0.5
SGMS1-206ENST00000602565 CORO1BQ9BR76 489 aa11.91□□□□□ -0.5
SGMS1-206ENST00000602565 RSRP1Q9BUV0 290 aa11.91□□□□□ -0.5
SGMS1-206ENST00000602565 F6X3S4 739 aa11.9□□□□□ -0.5
SGMS1-206ENST00000602565 FAM229AH3BQW9 127 aa11.9□□□□□ -0.5
SGMS1-206ENST00000602565 DEAF1O75398 565 aaPredicted RBP11.9□□□□□ -0.5
SGMS1-206ENST00000602565 GBP2P32456 591 aaPredicted RBP11.9□□□□□ -0.5
SGMS1-206ENST00000602565 ILDR2Q71H61 639 aa11.9□□□□□ -0.5
SGMS1-206ENST00000602565 ERMP1Q7Z2K6 904 aa11.9□□□□□ -0.5
SGMS1-206ENST00000602565 METTL16Q86W50 562 aaKnown RBP11.9□□□□□ -0.5
SGMS1-206ENST00000602565 FBXO11Q86XK2 927 aa11.9□□□□□ -0.5
SGMS1-206ENST00000602565 USP26Q9BXU7 913 aa11.9□□□□□ -0.5
SGMS1-206ENST00000602565 KBTBD4Q9NVX7 518 aa11.9□□□□□ -0.5
SGMS1-206ENST00000602565 LRRC14Q15048 493 aa11.89□□□□□ -0.51
SGMS1-206ENST00000602565 ARNTP27540 789 aa11.88□□□□□ -0.51
SGMS1-206ENST00000602565 HNRNPUQ00839 825 aaKnown RBP eCLIP11.88□□□□□ -0.51
SGMS1-206ENST00000602565 POU4F3Q15319 338 aa11.88□□□□□ -0.51
SGMS1-206ENST00000602565 ZNF394Q53GI3 561 aa11.88□□□□□ -0.51
SGMS1-206ENST00000602565 CCSER2Q9H7U1 834 aa11.88□□□□□ -0.51
SGMS1-206ENST00000602565 COPRSQ9NQ92 184 aa11.88□□□□□ -0.51
SGMS1-206ENST00000602565 PCDHGB7Q9Y5F8 929 aa11.88□□□□□ -0.51
SGMS1-206ENST00000602565 MINDY4BA8MYZ0 360 aa11.87□□□□□ -0.51
SGMS1-206ENST00000602565 RPS26P62854 115 aaKnown RBP11.87□□□□□ -0.51
SGMS1-206ENST00000602565 FOXD4L6Q3SYB3 417 aaPredicted RBP11.87□□□□□ -0.51
SGMS1-206ENST00000602565 FOXD4L3Q6VB84 417 aaPredicted RBP11.87□□□□□ -0.51
SGMS1-206ENST00000602565 TMEM74Q96NL1 305 aa11.87□□□□□ -0.51
SGMS1-206ENST00000602565 CYP8B1Q9UNU6 501 aa11.87□□□□□ -0.51
SGMS1-206ENST00000602565 DDX3YO15523 660 aaKnown RBP11.86□□□□□ -0.51
SGMS1-206ENST00000602565 GSTP1P09211 210 aaKnown RBP11.86□□□□□ -0.51
SGMS1-206ENST00000602565 ELNP15502 786 aa11.86□□□□□ -0.51
SGMS1-206ENST00000602565 MAOBP27338 520 aa11.86□□□□□ -0.51
SGMS1-206ENST00000602565 HP1BP3Q5SSJ5 553 aaPredicted RBP11.86□□□□□ -0.51
SGMS1-206ENST00000602565 LLGL2Q6P1M3 1020 aa11.86□□□□□ -0.51
SGMS1-206ENST00000602565 KCNB2Q92953 911 aa11.86□□□□□ -0.51
SGMS1-206ENST00000602565 ZC3H12CQ9C0D7 883 aaKnown RBP11.86□□□□□ -0.51
SGMS1-206ENST00000602565 TLR6Q9Y2C9 796 aa11.86□□□□□ -0.51
SGMS1-206ENST00000602565 BMP6P22004 513 aa11.86□□□□□ -0.51
SGMS1-206ENST00000602565 PDE3AQ14432 1141 aa11.86□□□□□ -0.51
SGMS1-206ENST00000602565 DIEXFQ68CQ4 756 aaKnown RBP11.86□□□□□ -0.51
SGMS1-206ENST00000602565 AGMOQ6ZNB7 445 aa11.86□□□□□ -0.51
SGMS1-206ENST00000602565 ZNF654Q8IZM8 581 aa11.86□□□□□ -0.51
SGMS1-206ENST00000602565 STK35Q8TDR2 534 aa11.86□□□□□ -0.51
SGMS1-206ENST00000602565 TGIF2Q9GZN2 237 aa11.86□□□□□ -0.51
SGMS1-206ENST00000602565 DLL1O00548 723 aa11.85□□□□□ -0.51
SGMS1-206ENST00000602565 DUOXA2Q1HG44 320 aa11.85□□□□□ -0.51
SGMS1-206ENST00000602565 MAP1SQ66K74 1059 aaPredicted RBP11.85□□□□□ -0.51
SGMS1-206ENST00000602565 PHC3Q8NDX5 983 aa11.85□□□□□ -0.51
SGMS1-206ENST00000602565 DDX41Q9UJV9 622 aaKnown RBP11.85□□□□□ -0.51
SGMS1-206ENST00000602565 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.85□□□□□ -0.51
SGMS1-206ENST00000602565 ADAM11O75078 769 aa11.84□□□□□ -0.51
SGMS1-206ENST00000602565 SPATA31C1P0DKV0 1188 aa11.84□□□□□ -0.51
SGMS1-206ENST00000602565 MIR1-1HGQ9H1L0 117 aa11.84□□□□□ -0.51
SGMS1-206ENST00000602565 KCNK4Q9NYG8 393 aa11.84□□□□□ -0.51
SGMS1-206ENST00000602565 SNAP47Q5SQN1 464 aa11.83□□□□□ -0.52
SGMS1-206ENST00000602565 GRIN3AQ8TCU5 1115 aa11.83□□□□□ -0.52
SGMS1-206ENST00000602565 ACSBG1Q96GR2 724 aa11.83□□□□□ -0.52
SGMS1-206ENST00000602565 NRSN2Q9GZP1 204 aa11.83□□□□□ -0.52
SGMS1-206ENST00000602565 LOC100289279A0A1B0GTE1 492 aa11.82□□□□□ -0.52
SGMS1-206ENST00000602565 TM4SF5O14894 197 aa11.82□□□□□ -0.52
SGMS1-206ENST00000602565 HSP90B1P14625 803 aaKnown RBP11.82□□□□□ -0.52
SGMS1-206ENST00000602565 TFE3P19532 575 aaPredicted RBP11.82□□□□□ -0.52
SGMS1-206ENST00000602565 FAM160A1Q05DH4 1040 aa11.82□□□□□ -0.52
SGMS1-206ENST00000602565 RAD51AP2Q09MP3 1159 aa11.82□□□□□ -0.52
SGMS1-206ENST00000602565 CAMK2GQ13555 558 aaPredicted RBP11.82□□□□□ -0.52
SGMS1-206ENST00000602565 IGF2-ASQ6U949 168 aa11.82□□□□□ -0.52
SGMS1-206ENST00000602565 ACAD11Q709F0 780 aa11.82□□□□□ -0.52
SGMS1-206ENST00000602565 PDZD3Q86UT5 571 aa11.82□□□□□ -0.52
SGMS1-206ENST00000602565 UBASH3BQ8TF42 649 aa11.82□□□□□ -0.52
SGMS1-206ENST00000602565 MRPL18Q9H0U6 180 aaKnown RBP11.82□□□□□ -0.52
SGMS1-206ENST00000602565 ECEL1O95672 775 aa11.81□□□□□ -0.52
SGMS1-206ENST00000602565 PF4P02776 101 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms