RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 GYG1P46976 350 aa21.28■■□□□ 1
USE1-208ENST00000600970 VGLL4Q14135 290 aa21.28■■□□□ 1
USE1-208ENST00000600970 UBE4AQ14139 1066 aa21.28■■□□□ 1
USE1-208ENST00000600970 TAF1CQ15572 869 aaPredicted RBP21.28■■□□□ 1
USE1-208ENST00000600970 ZFYVE28Q9HCC9 887 aa21.28■■□□□ 1
USE1-208ENST00000600970 PTCH2Q9Y6C5 1203 aa21.28■■□□□ 1
USE1-208ENST00000600970 CCL15-CCL14A0A0B4J2E2 113 aa21.27■■□□□ 1
USE1-208ENST00000600970 HIBADHP31937 336 aaKnown RBP21.27■■□□□ 1
USE1-208ENST00000600970 GTF2A2P52657 109 aa21.27■■□□□ 1
USE1-208ENST00000600970 MAP3K9P80192 1104 aa21.27■■□□□ 1
USE1-208ENST00000600970 CCL15Q16663 113 aa21.27■■□□□ 1
USE1-208ENST00000600970 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.27■■□□□ 1
USE1-208ENST00000600970 FAM84BQ96KN1 310 aaPredicted RBP21.27■■□□□ 1
USE1-208ENST00000600970 TMEM39BQ9GZU3 492 aa21.27■■□□□ 1
USE1-208ENST00000600970 GRM8O00222 908 aa21.26■□□□□ 0.99
USE1-208ENST00000600970 CRKP46108 304 aa21.26■□□□□ 0.99
USE1-208ENST00000600970 EXOSC9Q06265 439 aaKnown RBP21.26■□□□□ 0.99
USE1-208ENST00000600970 ARHGEF6Q15052 776 aa21.26■□□□□ 0.99
USE1-208ENST00000600970 SLC9C1Q4G0N8 1177 aa21.26■□□□□ 0.99
USE1-208ENST00000600970 NCBP3Q53F19 620 aaKnown RBP21.26■□□□□ 0.99
USE1-208ENST00000600970 NBPF11Q86T75 865 aa21.26■□□□□ 0.99
USE1-208ENST00000600970 FAM43AQ8N2R8 423 aa21.26■□□□□ 0.99
USE1-208ENST00000600970 ZSWIM8A7E2V4 1837 aa21.26■□□□□ 0.99
USE1-208ENST00000600970 KIAA0100Q14667 2235 aaKnown RBP21.25■□□□□ 0.99
USE1-208ENST00000600970 TNNI2P48788 182 aa21.25■□□□□ 0.99
USE1-208ENST00000600970 FXR1P51114 621 aaKnown RBP eCLIP21.25■□□□□ 0.99
USE1-208ENST00000600970 OTUD5Q96G74 571 aa21.25■□□□□ 0.99
USE1-208ENST00000600970 CSADQ9Y600 493 aa21.25■□□□□ 0.99
USE1-208ENST00000600970 GRIK5Q16478 980 aa21.24■□□□□ 0.99
USE1-208ENST00000600970 PUS3Q9BZE2 481 aaKnown RBP21.24■□□□□ 0.99
USE1-208ENST00000600970 SLC4A8Q2Y0W8 1093 aa21.23■□□□□ 0.99
USE1-208ENST00000600970 C9orf78Q9NZ63 289 aaPredicted RBP21.23■□□□□ 0.99
USE1-208ENST00000600970 SPDYE5A6NIY4 337 aa21.22■□□□□ 0.99
USE1-208ENST00000600970 WDR63Q8IWG1 891 aa21.21■□□□□ 0.99
USE1-208ENST00000600970 ARHGAP39Q9C0H5 1083 aa21.21■□□□□ 0.99
USE1-208ENST00000600970 IQSEC3Q9UPP2 1182 aaPredicted RBP21.21■□□□□ 0.99
USE1-208ENST00000600970 COLQQ9Y215 455 aaPredicted RBP21.21■□□□□ 0.99
USE1-208ENST00000600970 RIPOR2Q9Y4F9 1068 aa21.21■□□□□ 0.99
USE1-208ENST00000600970 TLR2O60603 784 aa21.2■□□□□ 0.98
USE1-208ENST00000600970 ALDH1L1O75891 902 aa21.2■□□□□ 0.98
USE1-208ENST00000600970 MYCP01106 439 aaPredicted RBP21.2■□□□□ 0.98
USE1-208ENST00000600970 CACNB3P54284 484 aa21.2■□□□□ 0.98
USE1-208ENST00000600970 FBXO33Q7Z6M2 555 aa21.2■□□□□ 0.98
USE1-208ENST00000600970 SH3TC2Q8TF17 1288 aa21.2■□□□□ 0.98
USE1-208ENST00000600970 KAZALD1Q96I82 304 aa21.2■□□□□ 0.98
USE1-208ENST00000600970 SUCLG2Q96I99 432 aa21.2■□□□□ 0.98
USE1-208ENST00000600970 SALL2Q9Y467 1007 aaPredicted RBP21.2■□□□□ 0.98
USE1-208ENST00000600970 SNCAIPQ9Y6H5 919 aa21.2■□□□□ 0.98
USE1-208ENST00000600970 BTBD19C9JJ37 291 aa21.19■□□□□ 0.98
USE1-208ENST00000600970 CETPP11597 493 aa21.19■□□□□ 0.98
USE1-208ENST00000600970 LACTBP83111 547 aaPredicted RBP21.19■□□□□ 0.98
USE1-208ENST00000600970 HDLBPQ00341 1268 aaKnown RBP21.19■□□□□ 0.98
USE1-208ENST00000600970 CHAF1AQ13111 956 aaPredicted RBP21.19■□□□□ 0.98
USE1-208ENST00000600970 ERO1BQ86YB8 467 aa21.19■□□□□ 0.98
USE1-208ENST00000600970 ZCCHC17Q9NP64 241 aaKnown RBP21.19■□□□□ 0.98
USE1-208ENST00000600970 MROH5Q6ZUA9 1318 aa21.19■□□□□ 0.98
USE1-208ENST00000600970 WDHD1O75717 1129 aaPredicted RBP21.18■□□□□ 0.98
USE1-208ENST00000600970 KIF22Q14807 665 aa21.18■□□□□ 0.98
USE1-208ENST00000600970 SLC4A10Q6U841 1118 aa21.18■□□□□ 0.98
USE1-208ENST00000600970 VPS37DQ86XT2 251 aa21.18■□□□□ 0.98
USE1-208ENST00000600970 ZKSCAN4Q969J2 545 aaPredicted RBP21.18■□□□□ 0.98
USE1-208ENST00000600970 TEKT1Q969V4 418 aa21.18■□□□□ 0.98
USE1-208ENST00000600970 WRNIP1Q96S55 665 aa21.18■□□□□ 0.98
USE1-208ENST00000600970 SRCIN1Q9C0H9 1055 aa21.18■□□□□ 0.98
USE1-208ENST00000600970 IRF6O14896 467 aa21.17■□□□□ 0.98
USE1-208ENST00000600970 TBC1D22AQ8WUA7 517 aa21.17■□□□□ 0.98
USE1-208ENST00000600970 SPINK5Q9NQ38 1064 aaPredicted RBP21.17■□□□□ 0.98
USE1-208ENST00000600970 FRAT2O75474 233 aaPredicted RBP21.16■□□□□ 0.98
USE1-208ENST00000600970 SNAPC2Q13487 334 aa21.16■□□□□ 0.98
USE1-208ENST00000600970 FAM83AQ86UY5 434 aa21.16■□□□□ 0.98
USE1-208ENST00000600970 ZDHHC15Q96MV8 337 aa21.16■□□□□ 0.98
USE1-208ENST00000600970 GNRH1P01148 92 aa21.15■□□□□ 0.98
USE1-208ENST00000600970 NBPF7P0C2Y1 421 aaPredicted RBP21.15■□□□□ 0.98
USE1-208ENST00000600970 PPIL2Q13356 520 aa21.15■□□□□ 0.98
USE1-208ENST00000600970 LRRC24Q50LG9 513 aa21.15■□□□□ 0.98
USE1-208ENST00000600970 CAVIN4Q5BKX8 364 aa21.15■□□□□ 0.98
USE1-208ENST00000600970 MRIQ9BWK5 157 aa21.15■□□□□ 0.98
USE1-208ENST00000600970 TMOD2Q9NZR1 351 aa21.15■□□□□ 0.98
USE1-208ENST00000600970 H0YGN5 161 aa21.14■□□□□ 0.97
USE1-208ENST00000600970 PRMT2P55345 433 aa21.14■□□□□ 0.97
USE1-208ENST00000600970 METTL24Q5JXM2 366 aa21.14■□□□□ 0.97
USE1-208ENST00000600970 FKBP1CQ5VVH2 108 aa21.14■□□□□ 0.97
USE1-208ENST00000600970 APOBEC3HQ6NTF7 200 aaKnown RBP21.14■□□□□ 0.97
USE1-208ENST00000600970 VGLL2Q8N8G2 317 aa21.14■□□□□ 0.97
USE1-208ENST00000600970 HOOK2Q96ED9 719 aa21.14■□□□□ 0.97
USE1-208ENST00000600970 UTYO14607 1347 aa21.13■□□□□ 0.97
USE1-208ENST00000600970 ECM2O94769 699 aaPredicted RBP21.13■□□□□ 0.97
USE1-208ENST00000600970 CTGFP29279 349 aa21.13■□□□□ 0.97
USE1-208ENST00000600970 C17orf99Q6UX52 265 aa21.13■□□□□ 0.97
USE1-208ENST00000600970 BICC1Q9H694 974 aaKnown RBP21.13■□□□□ 0.97
USE1-208ENST00000600970 RPAP1Q9BWH6 1393 aaPredicted RBP21.12■□□□□ 0.97
USE1-208ENST00000600970 PDE8BO95263 885 aa21.12■□□□□ 0.97
USE1-208ENST00000600970 BCAMP50895 628 aa21.12■□□□□ 0.97
USE1-208ENST00000600970 PPATQ06203 517 aa21.12■□□□□ 0.97
USE1-208ENST00000600970 RABL6Q3YEC7 729 aaPredicted RBP21.12■□□□□ 0.97
USE1-208ENST00000600970 DCAF15Q66K64 600 aa21.12■□□□□ 0.97
USE1-208ENST00000600970 MYH13Q9UKX3 1938 aa21.12■□□□□ 0.97
USE1-208ENST00000600970 MAST3O60307 1309 aa21.11■□□□□ 0.97
USE1-208ENST00000600970 MTFR1Q15390 333 aa21.11■□□□□ 0.97
USE1-208ENST00000600970 MIGA2Q7L4E1 593 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms