RNA–Protein interactions for RNA: ENST00000600778.3

SOX2-OT-233, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 762 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-233ENST00000600778 ABHD8Q96I13 439 aa14.43□□□□□ -0.1
SOX2-OT-233ENST00000600778 CEP126Q9P2H0 1117 aa14.43□□□□□ -0.1
SOX2-OT-233ENST00000600778 ZNF70Q9UC06 446 aaPredicted RBP14.43□□□□□ -0.1
SOX2-OT-233ENST00000600778 FBXO3Q9UK99 471 aa14.43□□□□□ -0.1
SOX2-OT-233ENST00000600778 TNNQ9UQP3 1299 aa14.43□□□□□ -0.1
SOX2-OT-233ENST00000600778 ZBED9Q6R2W3 1325 aa14.42□□□□□ -0.1
SOX2-OT-233ENST00000600778 PPP1R12BO60237 982 aaPredicted RBP14.42□□□□□ -0.1
SOX2-OT-233ENST00000600778 CIAO1O76071 339 aa14.42□□□□□ -0.1
SOX2-OT-233ENST00000600778 GNAI3P08754 354 aa14.42□□□□□ -0.1
SOX2-OT-233ENST00000600778 TRIM27P14373 513 aa14.42□□□□□ -0.1
SOX2-OT-233ENST00000600778 SUPT20HL1Q3ZLR7 823 aa14.42□□□□□ -0.1
SOX2-OT-233ENST00000600778 SPDYE2Q495Y8 402 aa14.42□□□□□ -0.1
SOX2-OT-233ENST00000600778 LDLRAD1Q5T700 205 aa14.42□□□□□ -0.1
SOX2-OT-233ENST00000600778 CASP8AP2Q9UKL3 1982 aa14.42□□□□□ -0.1
SOX2-OT-233ENST00000600778 ARAP2Q8WZ64 1704 aa14.41□□□□□ -0.1
SOX2-OT-233ENST00000600778 AKAP11Q9UKA4 1901 aa14.41□□□□□ -0.1
SOX2-OT-233ENST00000600778 TCP10L2B9ZVM9 353 aa14.41□□□□□ -0.1
SOX2-OT-233ENST00000600778 IL15P40933 162 aaPredicted RBP14.41□□□□□ -0.1
SOX2-OT-233ENST00000600778 ATP2B3Q16720 1220 aa14.41□□□□□ -0.1
SOX2-OT-233ENST00000600778 ATF7IPQ6VMQ6 1270 aa14.41□□□□□ -0.1
SOX2-OT-233ENST00000600778 CLUAP1Q96AJ1 413 aa14.41□□□□□ -0.1
SOX2-OT-233ENST00000600778 SSC5DA1L4H1 1573 aa14.4□□□□□ -0.1
SOX2-OT-233ENST00000600778 USP2O75604 605 aaPredicted RBP14.4□□□□□ -0.1
SOX2-OT-233ENST00000600778 TM4SF4P48230 202 aa14.4□□□□□ -0.1
SOX2-OT-233ENST00000600778 HDLBPQ00341 1268 aaKnown RBP14.4□□□□□ -0.1
SOX2-OT-233ENST00000600778 DGKZQ13574 1117 aa14.4□□□□□ -0.1
SOX2-OT-233ENST00000600778 TNFAIP1Q13829 316 aa14.4□□□□□ -0.1
SOX2-OT-233ENST00000600778 MAP3K11Q16584 847 aa14.4□□□□□ -0.1
SOX2-OT-233ENST00000600778 TEKT1Q969V4 418 aa14.4□□□□□ -0.1
SOX2-OT-233ENST00000600778 SLC10A4Q96EP9 437 aa14.4□□□□□ -0.1
SOX2-OT-233ENST00000600778 MCOLN1Q9GZU1 580 aa14.4□□□□□ -0.1
SOX2-OT-233ENST00000600778 COPRSQ9NQ92 184 aa14.4□□□□□ -0.1
SOX2-OT-233ENST00000600778 SRGAP3O43295 1099 aa14.39□□□□□ -0.11
SOX2-OT-233ENST00000600778 TNNI2P48788 182 aa14.39□□□□□ -0.11
SOX2-OT-233ENST00000600778 SPRYD7Q5W111 196 aa14.39□□□□□ -0.11
SOX2-OT-233ENST00000600778 WDR66Q8TBY9 1149 aa14.39□□□□□ -0.11
SOX2-OT-233ENST00000600778 CLMNQ96JQ2 1002 aa14.39□□□□□ -0.11
SOX2-OT-233ENST00000600778 SUGT1Q9Y2Z0 365 aa14.39□□□□□ -0.11
SOX2-OT-233ENST00000600778 CCDC85CA6NKD9 419 aa14.38□□□□□ -0.11
SOX2-OT-233ENST00000600778 TBC1D8O95759 1140 aa14.38□□□□□ -0.11
SOX2-OT-233ENST00000600778 IREB2P48200 963 aaKnown RBP14.38□□□□□ -0.11
SOX2-OT-233ENST00000600778 CACNB3P54284 484 aa14.38□□□□□ -0.11
SOX2-OT-233ENST00000600778 SREBF2Q12772 1141 aa14.38□□□□□ -0.11
SOX2-OT-233ENST00000600778 MRIQ9BWK5 157 aa14.38□□□□□ -0.11
SOX2-OT-233ENST00000600778 TMEM39BQ9GZU3 492 aa14.38□□□□□ -0.11
SOX2-OT-233ENST00000600778 GNL3LQ9NVN8 582 aaKnown RBP14.38□□□□□ -0.11
SOX2-OT-233ENST00000600778 MAST3O60307 1309 aa14.38□□□□□ -0.11
SOX2-OT-233ENST00000600778 GNAI2P04899 355 aa14.37□□□□□ -0.11
SOX2-OT-233ENST00000600778 ADORA1P30542 326 aa14.37□□□□□ -0.11
SOX2-OT-233ENST00000600778 PHKA1P46020 1223 aa14.37□□□□□ -0.11
SOX2-OT-233ENST00000600778 TIMM10P62072 90 aa14.37□□□□□ -0.11
SOX2-OT-233ENST00000600778 ZKSCAN2Q63HK3 967 aa14.37□□□□□ -0.11
SOX2-OT-233ENST00000600778 APOBEC3HQ6NTF7 200 aaKnown RBP14.37□□□□□ -0.11
SOX2-OT-233ENST00000600778 CDAN1Q8IWY9 1227 aa14.37□□□□□ -0.11
SOX2-OT-233ENST00000600778 TMEM57Q8N5G2 664 aa14.37□□□□□ -0.11
SOX2-OT-233ENST00000600778 ZDHHC15Q96MV8 337 aa14.37□□□□□ -0.11
SOX2-OT-233ENST00000600778 TEPSINQ96N21 525 aa14.37□□□□□ -0.11
SOX2-OT-233ENST00000600778 UNCXA6NJT0 531 aa14.36□□□□□ -0.11
SOX2-OT-233ENST00000600778 TFCP2Q12800 502 aa14.36□□□□□ -0.11
SOX2-OT-233ENST00000600778 MTX1Q13505 466 aa14.36□□□□□ -0.11
SOX2-OT-233ENST00000600778 HHIPL2Q6UWX4 724 aa14.36□□□□□ -0.11
SOX2-OT-233ENST00000600778 ANKRD13AQ8IZ07 590 aa14.36□□□□□ -0.11
SOX2-OT-233ENST00000600778 WNK4Q96J92 1243 aa14.36□□□□□ -0.11
SOX2-OT-233ENST00000600778 TMOD2Q9NZR1 351 aa14.36□□□□□ -0.11
SOX2-OT-233ENST00000600778 DENND2AQ9ULE3 1009 aa14.36□□□□□ -0.11
SOX2-OT-233ENST00000600778 MYH13Q9UKX3 1938 aa14.35□□□□□ -0.11
SOX2-OT-233ENST00000600778 MANSC4A6NHS7 340 aaPredicted RBP14.35□□□□□ -0.11
SOX2-OT-233ENST00000600778 ZBTB48P10074 688 aaPredicted RBP14.35□□□□□ -0.11
SOX2-OT-233ENST00000600778 PRDX5P30044 214 aa14.35□□□□□ -0.11
SOX2-OT-233ENST00000600778 CCDC102BQ68D86 513 aa14.35□□□□□ -0.11
SOX2-OT-233ENST00000600778 AKAP2Q9Y2D5 859 aa14.35□□□□□ -0.11
SOX2-OT-233ENST00000600778 PNMA6EA0A0J9YXQ4 647 aa14.34□□□□□ -0.11
SOX2-OT-233ENST00000600778 A0A1B0GUL7 405 aa14.34□□□□□ -0.11
SOX2-OT-233ENST00000600778 SEMA3EO15041 775 aa14.34□□□□□ -0.11
SOX2-OT-233ENST00000600778 LDHBP07195 334 aaKnown RBP14.34□□□□□ -0.11
SOX2-OT-233ENST00000600778 GJA5P36382 358 aa14.34□□□□□ -0.11
SOX2-OT-233ENST00000600778 INHBEP58166 350 aa14.34□□□□□ -0.11
SOX2-OT-233ENST00000600778 DIXDC1Q155Q3 683 aa14.34□□□□□ -0.11
SOX2-OT-233ENST00000600778 NEUROD6Q96NK8 337 aa14.34□□□□□ -0.11
SOX2-OT-233ENST00000600778 ELP3Q9H9T3 547 aa14.34□□□□□ -0.11
SOX2-OT-233ENST00000600778 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.34□□□□□ -0.11
SOX2-OT-233ENST00000600778 G3BP1Q13283 466 aaKnown RBP eCLIP14.33□□□□□ -0.12
SOX2-OT-233ENST00000600778 FAM83AQ86UY5 434 aa14.33□□□□□ -0.12
SOX2-OT-233ENST00000600778 FTSJ3Q8IY81 847 aaKnown RBP14.33□□□□□ -0.12
SOX2-OT-233ENST00000600778 ZNF296Q8WUU4 475 aaPredicted RBP14.33□□□□□ -0.12
SOX2-OT-233ENST00000600778 OPTNQ96CV9 577 aa14.33□□□□□ -0.12
SOX2-OT-233ENST00000600778 XAGE2Q96GT9 111 aa14.33□□□□□ -0.12
SOX2-OT-233ENST00000600778 DAGLAQ9Y4D2 1042 aa14.33□□□□□ -0.12
SOX2-OT-233ENST00000600778 GPR25O00155 361 aa14.32□□□□□ -0.12
SOX2-OT-233ENST00000600778 ALDH1A1P00352 501 aa14.32□□□□□ -0.12
SOX2-OT-233ENST00000600778 MAP3K9P80192 1104 aa14.32□□□□□ -0.12
SOX2-OT-233ENST00000600778 FKBP1CQ5VVH2 108 aa14.32□□□□□ -0.12
SOX2-OT-233ENST00000600778 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.32□□□□□ -0.12
SOX2-OT-233ENST00000600778 CTU1Q7Z7A3 348 aaKnown RBP14.32□□□□□ -0.12
SOX2-OT-233ENST00000600778 IFNL1Q8IU54 200 aa14.32□□□□□ -0.12
SOX2-OT-233ENST00000600778 R3HDMLQ9H3Y0 253 aa14.32□□□□□ -0.12
SOX2-OT-233ENST00000600778 SALL1Q9NSC2 1324 aa14.32□□□□□ -0.12
SOX2-OT-233ENST00000600778 IGF2BP3O00425 579 aaKnown RBP eCLIP14.31□□□□□ -0.12
SOX2-OT-233ENST00000600778 TCP10Q12799 353 aa14.31□□□□□ -0.12
SOX2-OT-233ENST00000600778 RASGRF1Q13972 1273 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms