RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 AP5Z1O43299 807 aa13.47□□□□□ -0.25
ARHGEF1-220ENST00000600274 ZNF165P49910 485 aa13.47□□□□□ -0.25
ARHGEF1-220ENST00000600274 METAP2P50579 478 aaKnown RBP eCLIP13.47□□□□□ -0.25
ARHGEF1-220ENST00000600274 TMEM67Q5HYA8 995 aa13.47□□□□□ -0.25
ARHGEF1-220ENST00000600274 AEBP2Q6ZN18 517 aaPredicted RBP13.47□□□□□ -0.25
ARHGEF1-220ENST00000600274 PTF1AQ7RTS3 328 aa13.47□□□□□ -0.25
ARHGEF1-220ENST00000600274 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.47□□□□□ -0.25
ARHGEF1-220ENST00000600274 MTMR7Q9Y216 660 aa13.47□□□□□ -0.25
ARHGEF1-220ENST00000600274 BECN2A8MW95 431 aa13.47□□□□□ -0.25
ARHGEF1-220ENST00000600274 LPIN2Q92539 896 aa13.47□□□□□ -0.25
ARHGEF1-220ENST00000600274 PDCL3Q9H2J4 239 aa13.47□□□□□ -0.25
ARHGEF1-220ENST00000600274 ZSCAN16Q9H4T2 348 aaPredicted RBP13.47□□□□□ -0.25
ARHGEF1-220ENST00000600274 GOLGA6L19H0YKK7 550 aa13.46□□□□□ -0.25
ARHGEF1-220ENST00000600274 ANTXR2P58335 489 aa13.46□□□□□ -0.25
ARHGEF1-220ENST00000600274 CYB5R4Q7L1T6 521 aa13.46□□□□□ -0.25
ARHGEF1-220ENST00000600274 SDR42E1Q8WUS8 393 aa13.46□□□□□ -0.25
ARHGEF1-220ENST00000600274 ZNF396Q96N95 335 aaPredicted RBP13.46□□□□□ -0.25
ARHGEF1-220ENST00000600274 SLC4A4Q9Y6R1 1079 aa13.46□□□□□ -0.25
ARHGEF1-220ENST00000600274 PRDM1O75626 825 aa13.46□□□□□ -0.25
ARHGEF1-220ENST00000600274 CCDC152Q4G0S7 254 aa13.46□□□□□ -0.25
ARHGEF1-220ENST00000600274 CBX8Q9HC52 389 aa13.46□□□□□ -0.25
ARHGEF1-220ENST00000600274 MRVI1Q9Y6F6 885 aa13.46□□□□□ -0.25
ARHGEF1-220ENST00000600274 CARMIL3Q8ND23 1372 aa13.46□□□□□ -0.25
ARHGEF1-220ENST00000600274 OFD1O75665 1012 aa13.46□□□□□ -0.26
ARHGEF1-220ENST00000600274 TTF1Q15361 905 aaPredicted RBP13.46□□□□□ -0.26
ARHGEF1-220ENST00000600274 CLIC4Q9Y696 253 aa13.46□□□□□ -0.26
ARHGEF1-220ENST00000600274 hCG_1642624A0A1W2PR95 340 aa13.45□□□□□ -0.26
ARHGEF1-220ENST00000600274 FDPSP14324 419 aaKnown RBP13.45□□□□□ -0.26
ARHGEF1-220ENST00000600274 INTS5Q6P9B9 1019 aaKnown RBP13.45□□□□□ -0.26
ARHGEF1-220ENST00000600274 FAM200AQ8TCP9 573 aa13.45□□□□□ -0.26
ARHGEF1-220ENST00000600274 SLC26A6Q9BXS9 759 aa13.45□□□□□ -0.26
ARHGEF1-220ENST00000600274 DDX19AQ9NUU7 478 aaKnown RBP13.45□□□□□ -0.26
ARHGEF1-220ENST00000600274 BCL9O00512 1426 aa13.45□□□□□ -0.26
ARHGEF1-220ENST00000600274 GOLGA8AA7E2F4 631 aa13.45□□□□□ -0.26
ARHGEF1-220ENST00000600274 DHX16O60231 1041 aaKnown RBP13.45□□□□□ -0.26
ARHGEF1-220ENST00000600274 CYP7A1P22680 504 aa13.45□□□□□ -0.26
ARHGEF1-220ENST00000600274 ALG1Q9BT22 464 aa13.45□□□□□ -0.26
ARHGEF1-220ENST00000600274 GOLPH3LQ9H4A5 285 aa13.45□□□□□ -0.26
ARHGEF1-220ENST00000600274 SMIM22K7EJ46 135 aa13.45□□□□□ -0.26
ARHGEF1-220ENST00000600274 CHRNDQ07001 517 aa13.45□□□□□ -0.26
ARHGEF1-220ENST00000600274 SMARCC2Q8TAQ2 1214 aa13.45□□□□□ -0.26
ARHGEF1-220ENST00000600274 CCDC69A6NI79 296 aa13.44□□□□□ -0.26
ARHGEF1-220ENST00000600274 EIF5P55010 431 aaKnown RBP13.44□□□□□ -0.26
ARHGEF1-220ENST00000600274 ERFEQ4G0M1 354 aa13.44□□□□□ -0.26
ARHGEF1-220ENST00000600274 LCORLQ8N3X6 602 aa13.44□□□□□ -0.26
ARHGEF1-220ENST00000600274 TFCP2L1Q9NZI6 479 aa13.44□□□□□ -0.26
ARHGEF1-220ENST00000600274 SRP68Q9UHB9 627 aaKnown RBP13.44□□□□□ -0.26
ARHGEF1-220ENST00000600274 NEDD4P46934 1319 aa13.44□□□□□ -0.26
ARHGEF1-220ENST00000600274 ADAMTS7Q9UKP4 1686 aa13.44□□□□□ -0.26
ARHGEF1-220ENST00000600274 RIC1Q4ADV7 1423 aa13.44□□□□□ -0.26
ARHGEF1-220ENST00000600274 TNS2Q63HR2 1409 aa13.44□□□□□ -0.26
ARHGEF1-220ENST00000600274 UQCRFS1P1P0C7P4 283 aa13.44□□□□□ -0.26
ARHGEF1-220ENST00000600274 PTGS1P23219 599 aa13.44□□□□□ -0.26
ARHGEF1-220ENST00000600274 CPLX2Q6PUV4 134 aaKnown RBP13.44□□□□□ -0.26
ARHGEF1-220ENST00000600274 MB21D2Q8IYB1 491 aaPredicted RBP13.44□□□□□ -0.26
ARHGEF1-220ENST00000600274 ZNF274Q96GC6 653 aaPredicted RBP13.44□□□□□ -0.26
ARHGEF1-220ENST00000600274 LLPHQ9BRT6 129 aaKnown RBP13.44□□□□□ -0.26
ARHGEF1-220ENST00000600274 PLA2G12BQ9BX93 195 aa13.44□□□□□ -0.26
ARHGEF1-220ENST00000600274 CLSTN2Q9H4D0 955 aa13.44□□□□□ -0.26
ARHGEF1-220ENST00000600274 CYP2D7A0A087X1C5 515 aa13.44□□□□□ -0.26
ARHGEF1-220ENST00000600274 C3orf67Q6ZVT6 689 aa13.44□□□□□ -0.26
ARHGEF1-220ENST00000600274 ZNF34Q8IZ26 560 aa13.44□□□□□ -0.26
ARHGEF1-220ENST00000600274 ALDH8A1Q9H2A2 487 aaPredicted RBP13.44□□□□□ -0.26
ARHGEF1-220ENST00000600274 ANGEL1Q9UNK9 670 aaKnown RBP13.44□□□□□ -0.26
ARHGEF1-220ENST00000600274 JCADQ9P266 1359 aa13.43□□□□□ -0.26
ARHGEF1-220ENST00000600274 ZBTB43O43298 467 aa13.43□□□□□ -0.26
ARHGEF1-220ENST00000600274 TRIM29Q14134 588 aa13.43□□□□□ -0.26
ARHGEF1-220ENST00000600274 SPECC1Q5M775 1068 aa13.43□□□□□ -0.26
ARHGEF1-220ENST00000600274 FILIP1Q7Z7B0 1213 aa13.43□□□□□ -0.26
ARHGEF1-220ENST00000600274 NRBP1Q9UHY1 535 aa13.43□□□□□ -0.26
ARHGEF1-220ENST00000600274 SLC12A7Q9Y666 1083 aa13.43□□□□□ -0.26
ARHGEF1-220ENST00000600274 CDHR2Q9BYE9 1310 aa13.43□□□□□ -0.26
ARHGEF1-220ENST00000600274 RFX7Q2KHR2 1363 aa13.43□□□□□ -0.26
ARHGEF1-220ENST00000600274 IGSF3O75054 1194 aa13.43□□□□□ -0.26
ARHGEF1-220ENST00000600274 IFNL3Q8IZI9 196 aa13.43□□□□□ -0.26
ARHGEF1-220ENST00000600274 PKD1L3Q7Z443 1732 aa13.43□□□□□ -0.26
ARHGEF1-220ENST00000600274 CBX1P83916 185 aa13.42□□□□□ -0.26
ARHGEF1-220ENST00000600274 UVSSAQ2YD98 709 aa13.42□□□□□ -0.26
ARHGEF1-220ENST00000600274 NAA16Q6N069 864 aaPredicted RBP13.42□□□□□ -0.26
ARHGEF1-220ENST00000600274 MFSD6Q6ZSS7 791 aa13.42□□□□□ -0.26
ARHGEF1-220ENST00000600274 C11orf57Q6ZUT1 292 aaPredicted RBP13.42□□□□□ -0.26
ARHGEF1-220ENST00000600274 CCDC186Q7Z3E2 898 aa13.42□□□□□ -0.26
ARHGEF1-220ENST00000600274 VGLL2Q8N8G2 317 aa13.42□□□□□ -0.26
ARHGEF1-220ENST00000600274 STRBPQ96SI9 672 aaKnown RBP13.42□□□□□ -0.26
ARHGEF1-220ENST00000600274 FBXO3Q9UK99 471 aa13.42□□□□□ -0.26
ARHGEF1-220ENST00000600274 PCDHA7Q9UN72 937 aa13.42□□□□□ -0.26
ARHGEF1-220ENST00000600274 ELP1O95163 1332 aa13.42□□□□□ -0.26
ARHGEF1-220ENST00000600274 MROH5Q6ZUA9 1318 aa13.42□□□□□ -0.26
ARHGEF1-220ENST00000600274 ERVV-1B6SEH8 477 aa13.42□□□□□ -0.26
ARHGEF1-220ENST00000600274 KIF28PB7ZC32 967 aa13.42□□□□□ -0.26
ARHGEF1-220ENST00000600274 CAMTA2O94983 1202 aa13.42□□□□□ -0.26
ARHGEF1-220ENST00000600274 CDC27P30260 824 aa13.42□□□□□ -0.26
ARHGEF1-220ENST00000600274 IARSP41252 1262 aaKnown RBP13.42□□□□□ -0.26
ARHGEF1-220ENST00000600274 LRMPQ12912 555 aa13.42□□□□□ -0.26
ARHGEF1-220ENST00000600274 ANKRD18AQ8IVF6 992 aa13.42□□□□□ -0.26
ARHGEF1-220ENST00000600274 FUCA2Q9BTY2 467 aa13.42□□□□□ -0.26
ARHGEF1-220ENST00000600274 NBPF3Q9H094 633 aa13.42□□□□□ -0.26
ARHGEF1-220ENST00000600274 HPS5Q9UPZ3 1129 aa13.42□□□□□ -0.26
ARHGEF1-220ENST00000600274 ERICH2A1L162 156 aa13.41□□□□□ -0.26
ARHGEF1-220ENST00000600274 RANBP6O60518 1105 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms