RNA–Protein interactions for RNA: ENST00000599335.5

SUPT5H-216, Transcript of SPT5 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT5H, Length 3,796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT5H-216ENST00000599335 RNF20Q5VTR2 975 aa13.18□□□□□ -0.3
SUPT5H-216ENST00000599335 C10orf67Q8IYJ2 551 aa13.18□□□□□ -0.3
SUPT5H-216ENST00000599335 CEP126Q9P2H0 1117 aa13.18□□□□□ -0.3
SUPT5H-216ENST00000599335 IPO7O95373 1038 aaKnown RBP13.17□□□□□ -0.3
SUPT5H-216ENST00000599335 ADCK5Q3MIX3 580 aa13.17□□□□□ -0.3
SUPT5H-216ENST00000599335 CCDC152Q4G0S7 254 aa13.17□□□□□ -0.3
SUPT5H-216ENST00000599335 DONSONQ9NYP3 566 aa13.17□□□□□ -0.3
SUPT5H-216ENST00000599335 ZDHHC9Q9Y397 364 aa13.17□□□□□ -0.3
SUPT5H-216ENST00000599335 A0A0D9SFI3 127 aa13.17□□□□□ -0.3
SUPT5H-216ENST00000599335 TIMM10P62072 90 aa13.17□□□□□ -0.3
SUPT5H-216ENST00000599335 TNNI3KQ59H18 835 aa13.17□□□□□ -0.3
SUPT5H-216ENST00000599335 BRMS1Q9HCU9 246 aa13.17□□□□□ -0.3
SUPT5H-216ENST00000599335 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.17□□□□□ -0.3
SUPT5H-216ENST00000599335 FPGT-TNNI3KV9GXZ4 949 aa13.17□□□□□ -0.3
SUPT5H-216ENST00000599335 FKBP4Q02790 459 aaKnown RBP eCLIP13.17□□□□□ -0.3
SUPT5H-216ENST00000599335 PTPN12Q05209 780 aaKnown RBP13.17□□□□□ -0.3
SUPT5H-216ENST00000599335 STK3Q13188 491 aa13.17□□□□□ -0.3
SUPT5H-216ENST00000599335 ZRSR2Q15696 482 aaKnown RBP13.17□□□□□ -0.3
SUPT5H-216ENST00000599335 LRRC24Q50LG9 513 aa13.17□□□□□ -0.3
SUPT5H-216ENST00000599335 NLRP10Q86W26 655 aa13.17□□□□□ -0.3
SUPT5H-216ENST00000599335 NECAB1Q8N987 351 aa13.17□□□□□ -0.3
SUPT5H-216ENST00000599335 CCDC171Q6TFL3 1326 aa13.16□□□□□ -0.3
SUPT5H-216ENST00000599335 ITGA6P23229 1130 aa13.16□□□□□ -0.3
SUPT5H-216ENST00000599335 NOM1Q5C9Z4 860 aaKnown RBP13.16□□□□□ -0.3
SUPT5H-216ENST00000599335 MTFR1LQ9H019 292 aa13.16□□□□□ -0.3
SUPT5H-216ENST00000599335 LMBRD1Q9NUN5 540 aa13.16□□□□□ -0.3
SUPT5H-216ENST00000599335 C5P01031 1676 aa13.16□□□□□ -0.3
SUPT5H-216ENST00000599335 PNPLA7Q6ZV29 1317 aa13.16□□□□□ -0.3
SUPT5H-216ENST00000599335 DOK7Q18PE1 504 aa13.16□□□□□ -0.3
SUPT5H-216ENST00000599335 SLC4A8Q2Y0W8 1093 aa13.16□□□□□ -0.3
SUPT5H-216ENST00000599335 ACRBPQ8NEB7 543 aa13.16□□□□□ -0.3
SUPT5H-216ENST00000599335 DBNLQ9UJU6 430 aaKnown RBP13.16□□□□□ -0.3
SUPT5H-216ENST00000599335 CLEC11AQ9Y240 323 aa13.16□□□□□ -0.3
SUPT5H-216ENST00000599335 CREB3L3Q68CJ9 461 aa13.16□□□□□ -0.3
SUPT5H-216ENST00000599335 FEZ2Q9UHY8 353 aaPredicted RBP13.16□□□□□ -0.3
SUPT5H-216ENST00000599335 WDR33Q9C0J8 1336 aaKnown RBP13.15□□□□□ -0.3
SUPT5H-216ENST00000599335 CHGBP05060 677 aa13.15□□□□□ -0.3
SUPT5H-216ENST00000599335 DPEP1P16444 411 aa13.15□□□□□ -0.3
SUPT5H-216ENST00000599335 BLOC1S2Q6QNY1 142 aa13.15□□□□□ -0.3
SUPT5H-216ENST00000599335 KCPQ6ZWJ8 1503 aa13.15□□□□□ -0.3
SUPT5H-216ENST00000599335 TPD52L2O43399 206 aaKnown RBP13.15□□□□□ -0.3
SUPT5H-216ENST00000599335 CCDC129Q6ZRS4 1044 aa13.15□□□□□ -0.3
SUPT5H-216ENST00000599335 INTS4Q96HW7 963 aaKnown RBP13.15□□□□□ -0.3
SUPT5H-216ENST00000599335 CDC5LQ99459 802 aaKnown RBP13.15□□□□□ -0.3
SUPT5H-216ENST00000599335 GREM2Q9H772 168 aa13.15□□□□□ -0.3
SUPT5H-216ENST00000599335 COPRSQ9NQ92 184 aa13.15□□□□□ -0.3
SUPT5H-216ENST00000599335 LARGE2Q8N3Y3 721 aa13.15□□□□□ -0.31
SUPT5H-216ENST00000599335 FIBPO43427 364 aa13.14□□□□□ -0.31
SUPT5H-216ENST00000599335 CAMTA2O94983 1202 aa13.14□□□□□ -0.31
SUPT5H-216ENST00000599335 PSMA5P28066 241 aa13.14□□□□□ -0.31
SUPT5H-216ENST00000599335 FOXO4P98177 505 aa13.14□□□□□ -0.31
SUPT5H-216ENST00000599335 CUL4AQ13619 759 aa13.14□□□□□ -0.31
SUPT5H-216ENST00000599335 RUFY3Q7L099 469 aa13.14□□□□□ -0.31
SUPT5H-216ENST00000599335 EXOC8Q8IYI6 725 aa13.14□□□□□ -0.31
SUPT5H-216ENST00000599335 PKD1L3Q7Z443 1732 aa13.14□□□□□ -0.31
SUPT5H-216ENST00000599335 UTYO14607 1347 aa13.14□□□□□ -0.31
SUPT5H-216ENST00000599335 H7C1W4 665 aa13.14□□□□□ -0.31
SUPT5H-216ENST00000599335 UFL1O94874 794 aa13.14□□□□□ -0.31
SUPT5H-216ENST00000599335 PARP10Q53GL7 1025 aa13.14□□□□□ -0.31
SUPT5H-216ENST00000599335 PRR5LQ6MZQ0 368 aa13.14□□□□□ -0.31
SUPT5H-216ENST00000599335 ZC3H12CQ9C0D7 883 aaKnown RBP13.14□□□□□ -0.31
SUPT5H-216ENST00000599335 NBPF3Q9H094 633 aa13.14□□□□□ -0.31
SUPT5H-216ENST00000599335 CXorf56Q9H5V9 222 aa13.14□□□□□ -0.31
SUPT5H-216ENST00000599335 SYCE3A1L190 88 aa13.14□□□□□ -0.31
SUPT5H-216ENST00000599335 CYP2E1P05181 493 aaPredicted RBP13.14□□□□□ -0.31
SUPT5H-216ENST00000599335 ZSCAN23Q3MJ62 389 aa13.14□□□□□ -0.31
SUPT5H-216ENST00000599335 SEC62Q99442 399 aaKnown RBP13.14□□□□□ -0.31
SUPT5H-216ENST00000599335 NOL7Q9UMY1 257 aaKnown RBP13.14□□□□□ -0.31
SUPT5H-216ENST00000599335 USP42Q9H9J4 1324 aaKnown RBP13.13□□□□□ -0.31
SUPT5H-216ENST00000599335 SF3A1Q15459 793 aaKnown RBP13.13□□□□□ -0.31
SUPT5H-216ENST00000599335 CCDC96Q2M329 555 aa13.13□□□□□ -0.31
SUPT5H-216ENST00000599335 C17orf53Q8N3J3 647 aaPredicted RBP13.13□□□□□ -0.31
SUPT5H-216ENST00000599335 NLGN2Q8NFZ4 835 aa13.13□□□□□ -0.31
SUPT5H-216ENST00000599335 JDP2Q8WYK2 163 aa13.13□□□□□ -0.31
SUPT5H-216ENST00000599335 CPSF2Q9P2I0 782 aaKnown RBP13.13□□□□□ -0.31
SUPT5H-216ENST00000599335 ZKSCAN5Q9Y2L8 839 aa13.13□□□□□ -0.31
SUPT5H-216ENST00000599335 PARP4Q9UKK3 1724 aaKnown RBP13.13□□□□□ -0.31
SUPT5H-216ENST00000599335 ABCC6O95255 1503 aa13.13□□□□□ -0.31
SUPT5H-216ENST00000599335 PLCH1Q4KWH8 1693 aa13.13□□□□□ -0.31
SUPT5H-216ENST00000599335 TOGARAM1Q9Y4F4 1720 aa13.13□□□□□ -0.31
SUPT5H-216ENST00000599335 BRD1O95696 1058 aa13.13□□□□□ -0.31
SUPT5H-216ENST00000599335 SLFNL1Q499Z3 407 aa13.13□□□□□ -0.31
SUPT5H-216ENST00000599335 ZNF589Q86UQ0 364 aaPredicted RBP13.13□□□□□ -0.31
SUPT5H-216ENST00000599335 CCDC191Q8NCU4 936 aa13.13□□□□□ -0.31
SUPT5H-216ENST00000599335 UBN2Q6ZU65 1347 aa13.13□□□□□ -0.31
SUPT5H-216ENST00000599335 GJB2P29033 226 aa13.12□□□□□ -0.31
SUPT5H-216ENST00000599335 PDE6BP35913 854 aa13.12□□□□□ -0.31
SUPT5H-216ENST00000599335 CASP7P55210 303 aa13.12□□□□□ -0.31
SUPT5H-216ENST00000599335 DPP8Q6V1X1 898 aaPredicted RBP13.12□□□□□ -0.31
SUPT5H-216ENST00000599335 PPP1R12AO14974 1030 aaPredicted RBP13.12□□□□□ -0.31
SUPT5H-216ENST00000599335 SLC27A2O14975 620 aa13.12□□□□□ -0.31
SUPT5H-216ENST00000599335 LARGE1O95461 756 aa13.12□□□□□ -0.31
SUPT5H-216ENST00000599335 DDR1Q08345 913 aa13.12□□□□□ -0.31
SUPT5H-216ENST00000599335 KIAA2012Q0VF49 1180 aa13.12□□□□□ -0.31
SUPT5H-216ENST00000599335 SART3Q15020 963 aaKnown RBP13.12□□□□□ -0.31
SUPT5H-216ENST00000599335 PPP1R9BQ96SB3 815 aa13.12□□□□□ -0.31
SUPT5H-216ENST00000599335 MRC1P22897 1456 aa13.12□□□□□ -0.31
SUPT5H-216ENST00000599335 RPS8P62241 208 aaKnown RBP13.12□□□□□ -0.31
SUPT5H-216ENST00000599335 FERMT3Q86UX7 667 aa13.12□□□□□ -0.31
SUPT5H-216ENST00000599335 WTIPA6NIX2 430 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms